RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 PFDN4Q9NQP4 134 aa20.84■□□□□ 0.93
MAP1LC3B-206ENST00000564844 KPNA7A9QM74 516 aa20.84■□□□□ 0.93
MAP1LC3B-206ENST00000564844 MAFO75444 373 aaPredicted RBP20.84■□□□□ 0.93
MAP1LC3B-206ENST00000564844 MAGEA6P43360 314 aa20.84■□□□□ 0.93
MAP1LC3B-206ENST00000564844 EFNA5P52803 228 aa20.84■□□□□ 0.93
MAP1LC3B-206ENST00000564844 ATP1A4Q13733 1029 aa20.84■□□□□ 0.93
MAP1LC3B-206ENST00000564844 USP10Q14694 798 aaKnown RBP20.84■□□□□ 0.93
MAP1LC3B-206ENST00000564844 NIM1KQ8IY84 436 aa20.84■□□□□ 0.93
MAP1LC3B-206ENST00000564844 OR6B3Q8NGW1 331 aa20.84■□□□□ 0.93
MAP1LC3B-206ENST00000564844 SLC45A3Q96JT2 553 aa20.84■□□□□ 0.93
MAP1LC3B-206ENST00000564844 QKIQ96PU8 341 aaKnown RBP eCLIP20.84■□□□□ 0.93
MAP1LC3B-206ENST00000564844 RBBP8Q99708 897 aa20.84■□□□□ 0.93
MAP1LC3B-206ENST00000564844 NT5C1AQ9BXI3 368 aa20.84■□□□□ 0.93
MAP1LC3B-206ENST00000564844 BLOC1S6Q9UL45 172 aa20.84■□□□□ 0.93
MAP1LC3B-206ENST00000564844 PRPF19Q9UMS4 504 aaKnown RBP20.84■□□□□ 0.93
MAP1LC3B-206ENST00000564844 TCAF2A6NFQ2 919 aa20.84■□□□□ 0.93
MAP1LC3B-206ENST00000564844 H6PDO95479 791 aa20.84■□□□□ 0.93
MAP1LC3B-206ENST00000564844 PGK2P07205 417 aa20.84■□□□□ 0.93
MAP1LC3B-206ENST00000564844 YAP1P46937 504 aaKnown RBP20.84■□□□□ 0.93
MAP1LC3B-206ENST00000564844 PSME3P61289 254 aa20.84■□□□□ 0.93
MAP1LC3B-206ENST00000564844 GHRHRQ02643 423 aa20.84■□□□□ 0.93
MAP1LC3B-206ENST00000564844 CCDC153Q494R4 210 aa20.84■□□□□ 0.93
MAP1LC3B-206ENST00000564844 GJC2Q5T442 439 aaPredicted RBP20.84■□□□□ 0.93
MAP1LC3B-206ENST00000564844 ZBTB49Q6ZSB9 765 aa20.84■□□□□ 0.93
MAP1LC3B-206ENST00000564844 PGAM4Q8N0Y7 254 aa20.84■□□□□ 0.93
MAP1LC3B-206ENST00000564844 FNDC8Q8TC99 324 aa20.84■□□□□ 0.93
MAP1LC3B-206ENST00000564844 FAM96AQ9H5X1 160 aa20.84■□□□□ 0.93
MAP1LC3B-206ENST00000564844 OLAHQ9NV23 265 aa20.84■□□□□ 0.93
MAP1LC3B-206ENST00000564844 MAP3K20Q9NYL2 800 aaKnown RBP20.84■□□□□ 0.93
MAP1LC3B-206ENST00000564844 TLK1Q9UKI8 766 aa20.84■□□□□ 0.93
MAP1LC3B-206ENST00000564844 BARX2Q9UMQ3 279 aaPredicted RBP20.84■□□□□ 0.93
MAP1LC3B-206ENST00000564844 MYRFQ9Y2G1 1151 aa20.84■□□□□ 0.93
MAP1LC3B-206ENST00000564844 B4GALT4O60513 344 aa20.83■□□□□ 0.93
MAP1LC3B-206ENST00000564844 BCAS2O75934 225 aaPredicted RBP20.83■□□□□ 0.93
MAP1LC3B-206ENST00000564844 VARSP26640 1264 aaKnown RBP20.83■□□□□ 0.93
MAP1LC3B-206ENST00000564844 NUMBP49757 651 aa20.83■□□□□ 0.93
MAP1LC3B-206ENST00000564844 CITO14578 2027 aa20.83■□□□□ 0.92
MAP1LC3B-206ENST00000564844 UBR3Q6ZT12 1888 aa20.83■□□□□ 0.92
MAP1LC3B-206ENST00000564844 ACOT8O14734 319 aa20.83■□□□□ 0.92
MAP1LC3B-206ENST00000564844 ABCD1P33897 745 aa20.83■□□□□ 0.92
MAP1LC3B-206ENST00000564844 ARL4AP40617 200 aa20.83■□□□□ 0.92
MAP1LC3B-206ENST00000564844 ZFP1Q6P2D0 407 aa20.83■□□□□ 0.92
MAP1LC3B-206ENST00000564844 CHERPQ8IWX8 916 aaKnown RBP20.83■□□□□ 0.92
MAP1LC3B-206ENST00000564844 OFCC1Q8IZS5 231 aa20.83■□□□□ 0.92
MAP1LC3B-206ENST00000564844 ZNF280CQ8ND82 737 aa20.83■□□□□ 0.92
MAP1LC3B-206ENST00000564844 COPS5Q92905 334 aa20.83■□□□□ 0.92
MAP1LC3B-206ENST00000564844 NAA50Q9GZZ1 169 aaKnown RBP20.83■□□□□ 0.92
MAP1LC3B-206ENST00000564844 ACAD9Q9H845 621 aa20.83■□□□□ 0.92
MAP1LC3B-206ENST00000564844 FARP2O94887 1054 aaPredicted RBP20.82■□□□□ 0.92
MAP1LC3B-206ENST00000564844 POU5F1BQ06416 359 aa20.82■□□□□ 0.92
MAP1LC3B-206ENST00000564844 CTBP1Q13363 440 aa20.82■□□□□ 0.92
MAP1LC3B-206ENST00000564844 MPP3Q13368 585 aa20.82■□□□□ 0.92
MAP1LC3B-206ENST00000564844 TARBP2Q15633 366 aaKnown RBP20.82■□□□□ 0.92
MAP1LC3B-206ENST00000564844 AGKQ53H12 422 aa20.82■□□□□ 0.92
MAP1LC3B-206ENST00000564844 GPR107Q5VW38 600 aa20.82■□□□□ 0.92
MAP1LC3B-206ENST00000564844 STEAP4Q687X5 459 aa20.82■□□□□ 0.92
MAP1LC3B-206ENST00000564844 SLC41A1Q8IVJ1 513 aa20.82■□□□□ 0.92
MAP1LC3B-206ENST00000564844 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.82■□□□□ 0.92
MAP1LC3B-206ENST00000564844 CATSPER1Q8NEC5 780 aa20.82■□□□□ 0.92
MAP1LC3B-206ENST00000564844 USP33Q8TEY7 942 aa20.82■□□□□ 0.92
MAP1LC3B-206ENST00000564844 VPS39Q96JC1 886 aa20.82■□□□□ 0.92
MAP1LC3B-206ENST00000564844 EGFL7Q9UHF1 273 aa20.82■□□□□ 0.92
MAP1LC3B-206ENST00000564844 V9GYQ6 96 aa20.82■□□□□ 0.92
MAP1LC3B-206ENST00000564844 J3QRK9 145 aa20.82■□□□□ 0.92
MAP1LC3B-206ENST00000564844 SOCS2O14508 198 aa20.82■□□□□ 0.92
MAP1LC3B-206ENST00000564844 MT-ND1P03886 318 aa20.82■□□□□ 0.92
MAP1LC3B-206ENST00000564844 KIZQ2M2Z5 673 aa20.82■□□□□ 0.92
MAP1LC3B-206ENST00000564844 EFCAB12Q6NXP0 572 aa20.82■□□□□ 0.92
MAP1LC3B-206ENST00000564844 SREK1Q8WXA9 508 aaKnown RBP20.82■□□□□ 0.92
MAP1LC3B-206ENST00000564844 FBXL8Q96CD0 374 aa20.82■□□□□ 0.92
MAP1LC3B-206ENST00000564844 CPNE1Q99829 537 aa20.82■□□□□ 0.92
MAP1LC3B-206ENST00000564844 HAUS8Q9BT25 410 aa20.82■□□□□ 0.92
MAP1LC3B-206ENST00000564844 NIFKQ9BYG3 293 aaKnown RBP20.82■□□□□ 0.92
MAP1LC3B-206ENST00000564844 OXSMQ9NWU1 459 aa20.82■□□□□ 0.92
MAP1LC3B-206ENST00000564844 VANGL2Q9ULK5 521 aa20.82■□□□□ 0.92
MAP1LC3B-206ENST00000564844 PRORSD1PA6NEY8 169 aa20.81■□□□□ 0.92
MAP1LC3B-206ENST00000564844 GNL1P36915 607 aaPredicted RBP20.81■□□□□ 0.92
MAP1LC3B-206ENST00000564844 SURF1Q15526 300 aa20.81■□□□□ 0.92
MAP1LC3B-206ENST00000564844 GRTP1Q5TC63 336 aa20.81■□□□□ 0.92
MAP1LC3B-206ENST00000564844 NAT16Q8N8M0 369 aa20.81■□□□□ 0.92
MAP1LC3B-206ENST00000564844 C12orf43Q96C57 262 aaKnown RBP20.81■□□□□ 0.92
MAP1LC3B-206ENST00000564844 RAP2CQ9Y3L5 183 aa20.81■□□□□ 0.92
MAP1LC3B-206ENST00000564844 GMEB1Q9Y692 573 aa20.81■□□□□ 0.92
MAP1LC3B-206ENST00000564844 MGAMO43451 1857 aa20.81■□□□□ 0.92
MAP1LC3B-206ENST00000564844 EVPLQ92817 2033 aa20.81■□□□□ 0.92
MAP1LC3B-206ENST00000564844 GIPC1O14908 333 aa20.81■□□□□ 0.92
MAP1LC3B-206ENST00000564844 ZNF23P17027 643 aa20.81■□□□□ 0.92
MAP1LC3B-206ENST00000564844 DCAF6Q58WW2 860 aa20.81■□□□□ 0.92
MAP1LC3B-206ENST00000564844 PATL1Q86TB9 770 aaKnown RBP20.81■□□□□ 0.92
MAP1LC3B-206ENST00000564844 NT5DC4Q86YG4 428 aa20.81■□□□□ 0.92
MAP1LC3B-206ENST00000564844 ERI1Q8IV48 349 aaKnown RBP20.81■□□□□ 0.92
MAP1LC3B-206ENST00000564844 THEGQ9P2T0 379 aa20.81■□□□□ 0.92
MAP1LC3B-206ENST00000564844 XPR1Q9UBH6 696 aa20.81■□□□□ 0.92
MAP1LC3B-206ENST00000564844 MORF4L1Q9UBU8 362 aa20.81■□□□□ 0.92
MAP1LC3B-206ENST00000564844 A0A1W2PPW3 197 aa20.81■□□□□ 0.92
MAP1LC3B-206ENST00000564844 NMBRP28336 390 aa20.81■□□□□ 0.92
MAP1LC3B-206ENST00000564844 GRIA3P42263 894 aa20.81■□□□□ 0.92
MAP1LC3B-206ENST00000564844 LIMK2P53671 638 aa20.81■□□□□ 0.92
MAP1LC3B-206ENST00000564844 SLC10A6Q3KNW5 377 aa20.81■□□□□ 0.92
MAP1LC3B-206ENST00000564844 STXBP5Q5T5C0 1151 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms