RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 INHBBP09529 407 aa16.57■□□□□ 0.24
LINC00554-201ENST00000564841 HSPA13P48723 471 aa16.57■□□□□ 0.24
LINC00554-201ENST00000564841 CSE1LP55060 971 aaKnown RBP16.57■□□□□ 0.24
LINC00554-201ENST00000564841 ART3Q13508 389 aa16.57■□□□□ 0.24
LINC00554-201ENST00000564841 NEDD8Q15843 81 aa16.57■□□□□ 0.24
LINC00554-201ENST00000564841 TDRD5Q8NAT2 981 aaKnown RBP16.57■□□□□ 0.24
LINC00554-201ENST00000564841 RDM1Q8NG50 284 aa16.57■□□□□ 0.24
LINC00554-201ENST00000564841 MAGEB5Q9BZ81 275 aa16.57■□□□□ 0.24
LINC00554-201ENST00000564841 SOX17Q9H6I2 414 aaPredicted RBP16.57■□□□□ 0.24
LINC00554-201ENST00000564841 NCKIPSDQ9NZQ3 722 aa16.57■□□□□ 0.24
LINC00554-201ENST00000564841 GINS2Q9Y248 185 aa16.57■□□□□ 0.24
LINC00554-201ENST00000564841 VAPBO95292 243 aa16.56■□□□□ 0.24
LINC00554-201ENST00000564841 NR4A1P22736 598 aa16.56■□□□□ 0.24
LINC00554-201ENST00000564841 GLDCP23378 1020 aa16.56■□□□□ 0.24
LINC00554-201ENST00000564841 GRIA3P42263 894 aa16.56■□□□□ 0.24
LINC00554-201ENST00000564841 ESRRGP62508 458 aa16.56■□□□□ 0.24
LINC00554-201ENST00000564841 ZBED5Q49AG3 693 aa16.56■□□□□ 0.24
LINC00554-201ENST00000564841 PITRM1Q5JRX3 1037 aa16.56■□□□□ 0.24
LINC00554-201ENST00000564841 PERM1Q5SV97 790 aa16.56■□□□□ 0.24
LINC00554-201ENST00000564841 C16orf89Q6UX73 402 aa16.56■□□□□ 0.24
LINC00554-201ENST00000564841 SEPT1Q8WYJ6 367 aa16.56■□□□□ 0.24
LINC00554-201ENST00000564841 SLCO4A1Q96BD0 722 aa16.56■□□□□ 0.24
LINC00554-201ENST00000564841 STN1Q9H668 368 aaKnown RBP16.56■□□□□ 0.24
LINC00554-201ENST00000564841 ST14Q9Y5Y6 855 aa16.56■□□□□ 0.24
LINC00554-201ENST00000564841 PARP14Q460N5 1801 aa16.56■□□□□ 0.24
LINC00554-201ENST00000564841 TRDMT1O14717 391 aaKnown RBP16.56■□□□□ 0.24
LINC00554-201ENST00000564841 NOMO1Q15155 1222 aa16.56■□□□□ 0.24
LINC00554-201ENST00000564841 ANKRD26P1Q6NSI1 321 aa16.56■□□□□ 0.24
LINC00554-201ENST00000564841 GALNT18Q6P9A2 607 aa16.56■□□□□ 0.24
LINC00554-201ENST00000564841 OFCC1Q8IZS5 231 aa16.56■□□□□ 0.24
LINC00554-201ENST00000564841 RNF149Q8NC42 400 aa16.56■□□□□ 0.24
LINC00554-201ENST00000564841 TMEM35BQ8NCS4 154 aa16.56■□□□□ 0.24
LINC00554-201ENST00000564841 EBNA1BP2Q99848 306 aaKnown RBP16.56■□□□□ 0.24
LINC00554-201ENST00000564841 MUC3BQ9H195 1237 aa16.56■□□□□ 0.24
LINC00554-201ENST00000564841 DHX33Q9H6R0 707 aaKnown RBP16.56■□□□□ 0.24
LINC00554-201ENST00000564841 CAB39LQ9H9S4 337 aa16.56■□□□□ 0.24
LINC00554-201ENST00000564841 ARHGAP28Q9P2N2 729 aa16.56■□□□□ 0.24
LINC00554-201ENST00000564841 PRPF19Q9UMS4 504 aaKnown RBP16.56■□□□□ 0.24
LINC00554-201ENST00000564841 MAFBQ9Y5Q3 323 aaPredicted RBP16.56■□□□□ 0.24
LINC00554-201ENST00000564841 KRBA1A5PL33 1030 aa16.56■□□□□ 0.24
LINC00554-201ENST00000564841 CXCL11O14625 94 aa16.56■□□□□ 0.24
LINC00554-201ENST00000564841 HMGCRP04035 888 aa16.56■□□□□ 0.24
LINC00554-201ENST00000564841 KRT7P08729 469 aa16.56■□□□□ 0.24
LINC00554-201ENST00000564841 TYK2P29597 1187 aa16.56■□□□□ 0.24
LINC00554-201ENST00000564841 HARS2P49590 506 aaKnown RBP16.56■□□□□ 0.24
LINC00554-201ENST00000564841 IRF9Q00978 393 aa16.56■□□□□ 0.24
LINC00554-201ENST00000564841 HADHQ16836 314 aaKnown RBP16.56■□□□□ 0.24
LINC00554-201ENST00000564841 C15orf59Q2T9L4 293 aaPredicted RBP16.56■□□□□ 0.24
LINC00554-201ENST00000564841 TTC33Q6PID6 262 aaPredicted RBP16.56■□□□□ 0.24
LINC00554-201ENST00000564841 LAYNQ6UX15 382 aa16.56■□□□□ 0.24
LINC00554-201ENST00000564841 C14orf80Q86SX3 495 aa16.56■□□□□ 0.24
LINC00554-201ENST00000564841 NAT16Q8N8M0 369 aa16.56■□□□□ 0.24
LINC00554-201ENST00000564841 CISHQ9NSE2 258 aa16.56■□□□□ 0.24
LINC00554-201ENST00000564841 NRBP2Q9NSY0 501 aa16.56■□□□□ 0.24
LINC00554-201ENST00000564841 MAGED2Q9UNF1 606 aaPredicted RBP16.56■□□□□ 0.24
LINC00554-201ENST00000564841 TPST1O60507 370 aa16.55■□□□□ 0.24
LINC00554-201ENST00000564841 SESN2P58004 480 aaPredicted RBP16.55■□□□□ 0.24
LINC00554-201ENST00000564841 RAB39AQ14964 217 aa16.55■□□□□ 0.24
LINC00554-201ENST00000564841 BCL2A1Q16548 175 aa16.55■□□□□ 0.24
LINC00554-201ENST00000564841 ZBTB49Q6ZSB9 765 aa16.55■□□□□ 0.24
LINC00554-201ENST00000564841 USP50Q70EL3 339 aaPredicted RBP16.55■□□□□ 0.24
LINC00554-201ENST00000564841 HERC6Q8IVU3 1022 aa16.55■□□□□ 0.24
LINC00554-201ENST00000564841 TMEM192Q8IY95 271 aa16.55■□□□□ 0.24
LINC00554-201ENST00000564841 GABPB2Q8TAK5 448 aaPredicted RBP16.55■□□□□ 0.24
LINC00554-201ENST00000564841 HERC2P3Q9BVR0 1158 aa16.55■□□□□ 0.24
LINC00554-201ENST00000564841 OSBPL11Q9BXB4 747 aa16.55■□□□□ 0.24
LINC00554-201ENST00000564841 NPLQ9BXD5 320 aaPredicted RBP16.55■□□□□ 0.24
LINC00554-201ENST00000564841 POLR1BQ9H9Y6 1135 aa16.55■□□□□ 0.24
LINC00554-201ENST00000564841 SUN2Q9UH99 717 aa16.55■□□□□ 0.24
LINC00554-201ENST00000564841 USP18Q9UMW8 372 aa16.55■□□□□ 0.24
LINC00554-201ENST00000564841 SQORQ9Y6N5 450 aa16.55■□□□□ 0.24
LINC00554-201ENST00000564841 SOBPA7XYQ1 873 aa16.55■□□□□ 0.24
LINC00554-201ENST00000564841 GLRA3O75311 464 aa16.55■□□□□ 0.24
LINC00554-201ENST00000564841 ERVK-10P10266 1014 aa16.55■□□□□ 0.24
LINC00554-201ENST00000564841 MCF2P10911 925 aa16.55■□□□□ 0.24
LINC00554-201ENST00000564841 ZNF12P17014 697 aa16.55■□□□□ 0.24
LINC00554-201ENST00000564841 CLCN3P51790 818 aa16.55■□□□□ 0.24
LINC00554-201ENST00000564841 CARTPTQ16568 116 aa16.55■□□□□ 0.24
LINC00554-201ENST00000564841 THOC7Q6I9Y2 204 aaKnown RBP16.55■□□□□ 0.24
LINC00554-201ENST00000564841 Q8N9G6 341 aaPredicted RBP16.55■□□□□ 0.24
LINC00554-201ENST00000564841 CHPT1Q8WUD6 406 aa16.55■□□□□ 0.24
LINC00554-201ENST00000564841 HPS1Q92902 700 aa16.55■□□□□ 0.24
LINC00554-201ENST00000564841 TAMM41Q96BW9 452 aa16.55■□□□□ 0.24
LINC00554-201ENST00000564841 NTPCRQ9BSD7 190 aaKnown RBP16.55■□□□□ 0.24
LINC00554-201ENST00000564841 DHX35Q9H5Z1 703 aaKnown RBP16.55■□□□□ 0.24
LINC00554-201ENST00000564841 POU2F3Q9UKI9 436 aa16.55■□□□□ 0.24
LINC00554-201ENST00000564841 INO80B-WBP1J3KQ70 363 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 SULT1C4O75897 302 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 MYL4P12829 197 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 GARTP22102 1010 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 PPIL2Q13356 520 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 OLIG2Q13516 323 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 CAPSQ13938 189 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 CHSY3Q70JA7 882 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 FBXL20Q96IG2 436 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 CPXM1Q96SM3 734 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 CEP41Q9BYV8 373 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 IMPG2Q9BZV3 1241 aa16.54■□□□□ 0.24
LINC00554-201ENST00000564841 UNKQ9C0B0 810 aaKnown RBP16.54■□□□□ 0.24
LINC00554-201ENST00000564841 SMOXQ9NWM0 555 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms