RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 NDFIP2Q9NV92 336 aa19.46■□□□□ 0.71
TRADD-203ENST00000563348 SARDHQ9UL12 918 aa19.46■□□□□ 0.71
TRADD-203ENST00000563348 FZD10Q9ULW2 581 aa19.46■□□□□ 0.71
TRADD-203ENST00000563348 PCNX2A6NKB5 2137 aa19.45■□□□□ 0.7
TRADD-203ENST00000563348 LRRC72A6NJI9 287 aa19.45■□□□□ 0.7
TRADD-203ENST00000563348 C10orf142B7Z368 130 aa19.45■□□□□ 0.7
TRADD-203ENST00000563348 FSBPO95073 299 aa19.45■□□□□ 0.7
TRADD-203ENST00000563348 KCNK5O95279 499 aa19.45■□□□□ 0.7
TRADD-203ENST00000563348 PSMA2P25787 234 aa19.45■□□□□ 0.7
TRADD-203ENST00000563348 CD27P26842 260 aa19.45■□□□□ 0.7
TRADD-203ENST00000563348 DRD3P35462 400 aa19.45■□□□□ 0.7
TRADD-203ENST00000563348 ETFBP38117 255 aa19.45■□□□□ 0.7
TRADD-203ENST00000563348 KIAA0895LQ68EN5 471 aa19.45■□□□□ 0.7
TRADD-203ENST00000563348 NCEH1Q6PIU2 408 aa19.45■□□□□ 0.7
TRADD-203ENST00000563348 PYROXD2Q8N2H3 581 aa19.45■□□□□ 0.7
TRADD-203ENST00000563348 OR2A12Q8NGT7 310 aa19.45■□□□□ 0.7
TRADD-203ENST00000563348 OR2T34Q8NGX1 318 aa19.45■□□□□ 0.7
TRADD-203ENST00000563348 SNX19Q92543 992 aa19.45■□□□□ 0.7
TRADD-203ENST00000563348 FAM131CQ96AQ9 280 aa19.45■□□□□ 0.7
TRADD-203ENST00000563348 ZDHHC5Q9C0B5 715 aa19.45■□□□□ 0.7
TRADD-203ENST00000563348 MAGEH1Q9H213 219 aa19.45■□□□□ 0.7
TRADD-203ENST00000563348 CNOT8Q9UFF9 292 aaKnown RBP19.45■□□□□ 0.7
TRADD-203ENST00000563348 DNAI1Q9UI46 699 aa19.45■□□□□ 0.7
TRADD-203ENST00000563348 LUC7L2Q9Y383 392 aaKnown RBP19.45■□□□□ 0.7
TRADD-203ENST00000563348 FARP1Q9Y4F1 1045 aaPredicted RBP19.45■□□□□ 0.7
TRADD-203ENST00000563348 CABIN1Q9Y6J0 2220 aa19.45■□□□□ 0.7
TRADD-203ENST00000563348 CXorf51AA0A1B0GTR3 108 aa19.44■□□□□ 0.7
TRADD-203ENST00000563348 FAM47DPA6NHR8 397 aa19.44■□□□□ 0.7
TRADD-203ENST00000563348 ATMINO43313 823 aaPredicted RBP19.44■□□□□ 0.7
TRADD-203ENST00000563348 BNIP3LO60238 219 aa19.44■□□□□ 0.7
TRADD-203ENST00000563348 SERPING1P05155 500 aa19.44■□□□□ 0.7
TRADD-203ENST00000563348 IGHV4-34P06331 123 aa19.44■□□□□ 0.7
TRADD-203ENST00000563348 MYBL1P10243 752 aa19.44■□□□□ 0.7
TRADD-203ENST00000563348 ACVRL1P37023 503 aa19.44■□□□□ 0.7
TRADD-203ENST00000563348 ARF5P84085 180 aa19.44■□□□□ 0.7
TRADD-203ENST00000563348 TDRD12Q587J7 1177 aaKnown RBP19.44■□□□□ 0.7
TRADD-203ENST00000563348 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.44■□□□□ 0.7
TRADD-203ENST00000563348 MINDY1Q8N5J2 469 aa19.44■□□□□ 0.7
TRADD-203ENST00000563348 OR14C36Q8NHC7 312 aa19.44■□□□□ 0.7
TRADD-203ENST00000563348 PIP4K2CQ8TBX8 421 aa19.44■□□□□ 0.7
TRADD-203ENST00000563348 FNIP1Q8TF40 1166 aa19.44■□□□□ 0.7
TRADD-203ENST00000563348 ARHGEF2Q92974 986 aaKnown RBP19.44■□□□□ 0.7
TRADD-203ENST00000563348 TRIM11Q96F44 468 aa19.44■□□□□ 0.7
TRADD-203ENST00000563348 CCDC114Q96M63 670 aa19.44■□□□□ 0.7
TRADD-203ENST00000563348 ORAI3Q9BRQ5 295 aa19.44■□□□□ 0.7
TRADD-203ENST00000563348 XPO4Q9C0E2 1151 aaKnown RBP19.44■□□□□ 0.7
TRADD-203ENST00000563348 CEP44Q9C0F1 390 aa19.44■□□□□ 0.7
TRADD-203ENST00000563348 SLCO1B1Q9Y6L6 691 aa19.44■□□□□ 0.7
TRADD-203ENST00000563348 C1QTNF3-AMACRE9PGA6 284 aa19.43■□□□□ 0.7
TRADD-203ENST00000563348 SLC7A4O43246 635 aa19.43■□□□□ 0.7
TRADD-203ENST00000563348 OPHN1O60890 802 aa19.43■□□□□ 0.7
TRADD-203ENST00000563348 ZNF821O75541 412 aaPredicted RBP19.43■□□□□ 0.7
TRADD-203ENST00000563348 GYPCP04921 128 aa19.43■□□□□ 0.7
TRADD-203ENST00000563348 TPM3P06753 285 aa19.43■□□□□ 0.7
TRADD-203ENST00000563348 CSRP1P21291 193 aaKnown RBP19.43■□□□□ 0.7
TRADD-203ENST00000563348 EPHB2P29323 1055 aa19.43■□□□□ 0.7
TRADD-203ENST00000563348 CHRNA3P32297 505 aa19.43■□□□□ 0.7
TRADD-203ENST00000563348 SERPINH1P50454 418 aaKnown RBP19.43■□□□□ 0.7
TRADD-203ENST00000563348 METAP1P53582 386 aa19.43■□□□□ 0.7
TRADD-203ENST00000563348 GRIK2Q13002 908 aa19.43■□□□□ 0.7
TRADD-203ENST00000563348 SEMA3BQ13214 749 aa19.43■□□□□ 0.7
TRADD-203ENST00000563348 VPS36Q86VN1 386 aa19.43■□□□□ 0.7
TRADD-203ENST00000563348 ARFGAP1Q8N6T3 406 aa19.43■□□□□ 0.7
TRADD-203ENST00000563348 TMIEQ8NEW7 156 aa19.43■□□□□ 0.7
TRADD-203ENST00000563348 OR2I1PQ8NGU4 316 aa19.43■□□□□ 0.7
TRADD-203ENST00000563348 ZNF653Q96CK0 615 aa19.43■□□□□ 0.7
TRADD-203ENST00000563348 EPAS1Q99814 870 aa19.43■□□□□ 0.7
TRADD-203ENST00000563348 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.43■□□□□ 0.7
TRADD-203ENST00000563348 TRIM7Q9C029 511 aa19.43■□□□□ 0.7
TRADD-203ENST00000563348 TSPY26PQ9H489 355 aa19.43■□□□□ 0.7
TRADD-203ENST00000563348 DNAAF2Q9NVR5 837 aaKnown RBP19.43■□□□□ 0.7
TRADD-203ENST00000563348 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.43■□□□□ 0.7
TRADD-203ENST00000563348 SCINQ9Y6U3 715 aa19.43■□□□□ 0.7
TRADD-203ENST00000563348 PCDH15Q96QU1 1955 aa19.43■□□□□ 0.7
TRADD-203ENST00000563348 WASH4PA8MWX3 477 aa19.42■□□□□ 0.7
TRADD-203ENST00000563348 UPK3BL1B0FP48 263 aa19.42■□□□□ 0.7
TRADD-203ENST00000563348 UPK3BL2E5RIL1 263 aa19.42■□□□□ 0.7
TRADD-203ENST00000563348 RAMP2O60895 175 aa19.42■□□□□ 0.7
TRADD-203ENST00000563348 CD160O95971 181 aa19.42■□□□□ 0.7
TRADD-203ENST00000563348 CTSLP07711 333 aa19.42■□□□□ 0.7
TRADD-203ENST00000563348 CSNK1EP49674 416 aaKnown RBP19.42■□□□□ 0.7
TRADD-203ENST00000563348 CCR5P51681 352 aa19.42■□□□□ 0.7
TRADD-203ENST00000563348 AFF3P51826 1226 aaKnown RBP19.42■□□□□ 0.7
TRADD-203ENST00000563348 ADPRHP54922 357 aa19.42■□□□□ 0.7
TRADD-203ENST00000563348 BNC1Q01954 994 aa19.42■□□□□ 0.7
TRADD-203ENST00000563348 ZNF252P-AS1Q0IIN9 211 aa19.42■□□□□ 0.7
TRADD-203ENST00000563348 POLD3Q15054 466 aaPredicted RBP19.42■□□□□ 0.7
TRADD-203ENST00000563348 C22orf39Q6P5X5 142 aa19.42■□□□□ 0.7
TRADD-203ENST00000563348 RTL3Q8N8U3 475 aaKnown RBP19.42■□□□□ 0.7
TRADD-203ENST00000563348 TNKS2Q9H2K2 1166 aa19.42■□□□□ 0.7
TRADD-203ENST00000563348 KDM4CQ9H3R0 1056 aa19.42■□□□□ 0.7
TRADD-203ENST00000563348 MRPL47Q9HD33 250 aaKnown RBP19.42■□□□□ 0.7
TRADD-203ENST00000563348 TM9SF3Q9HD45 589 aa19.42■□□□□ 0.7
TRADD-203ENST00000563348 TPX2Q9ULW0 747 aaKnown RBP19.42■□□□□ 0.7
TRADD-203ENST00000563348 TBC1D3DA0A087WVF3 549 aa19.41■□□□□ 0.7
TRADD-203ENST00000563348 TBC1D3IA0A087WXS9 549 aa19.41■□□□□ 0.7
TRADD-203ENST00000563348 TBC1D3EA0A087X179 549 aa19.41■□□□□ 0.7
TRADD-203ENST00000563348 TBC1D3KA0A087X1G2 549 aa19.41■□□□□ 0.7
TRADD-203ENST00000563348 A0A1W2PPC4 97 aa19.41■□□□□ 0.7
TRADD-203ENST00000563348 TBC1D3FA6NER0 549 aaPredicted RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms