RNA–Protein interactions for RNA: ENST00000563180.1

IRF8-203, Transcript of interferon regulatory factor 8, humanhuman

TSL 1 (best) BASIC

Gene IRF8, Length 1,394 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF8-203ENST00000563180 TMCO3Q6UWJ1 677 aa17.52■□□□□ 0.39
IRF8-203ENST00000563180 CACUL1Q86Y37 369 aa17.52■□□□□ 0.39
IRF8-203ENST00000563180 ARHGAP12Q8IWW6 846 aa17.52■□□□□ 0.39
IRF8-203ENST00000563180 NPWQ8N729 165 aa17.52■□□□□ 0.39
IRF8-203ENST00000563180 GAB3Q8WWW8 586 aa17.52■□□□□ 0.39
IRF8-203ENST00000563180 RLN3Q8WXF3 142 aa17.52■□□□□ 0.39
IRF8-203ENST00000563180 PRCCQ92733 491 aaPredicted RBP17.52■□□□□ 0.39
IRF8-203ENST00000563180 SIPA1Q96FS4 1042 aa17.52■□□□□ 0.39
IRF8-203ENST00000563180 PHOX2BQ99453 314 aa17.52■□□□□ 0.39
IRF8-203ENST00000563180 FBRSQ9HAH7 460 aa17.52■□□□□ 0.39
IRF8-203ENST00000563180 LRRD1A4D1F6 860 aa17.51■□□□□ 0.39
IRF8-203ENST00000563180 ARHGAP42A6NI28 874 aa17.51■□□□□ 0.39
IRF8-203ENST00000563180 DFFAO00273 331 aa17.51■□□□□ 0.39
IRF8-203ENST00000563180 BNIP3LO60238 219 aa17.51■□□□□ 0.39
IRF8-203ENST00000563180 RPP40O75818 363 aaKnown RBP17.51■□□□□ 0.39
IRF8-203ENST00000563180 CD160O95971 181 aa17.51■□□□□ 0.39
IRF8-203ENST00000563180 KRT1P04264 644 aa17.51■□□□□ 0.39
IRF8-203ENST00000563180 SERPINH1P50454 418 aaKnown RBP17.51■□□□□ 0.39
IRF8-203ENST00000563180 PAPOLAP51003 745 aaKnown RBP17.51■□□□□ 0.39
IRF8-203ENST00000563180 ANKRD20A8PQ5CZ79 823 aa17.51■□□□□ 0.39
IRF8-203ENST00000563180 AFMIDQ63HM1 303 aa17.51■□□□□ 0.39
IRF8-203ENST00000563180 Q6ZVU0 165 aa17.51■□□□□ 0.39
IRF8-203ENST00000563180 CEP68Q76N32 757 aa17.51■□□□□ 0.39
IRF8-203ENST00000563180 STK40Q8N2I9 435 aa17.51■□□□□ 0.39
IRF8-203ENST00000563180 LZTR1Q8N653 840 aa17.51■□□□□ 0.39
IRF8-203ENST00000563180 PCDH19Q8TAB3 1148 aa17.51■□□□□ 0.39
IRF8-203ENST00000563180 FAM129BQ96TA1 746 aa17.51■□□□□ 0.39
IRF8-203ENST00000563180 ZNF670Q9BS34 389 aa17.51■□□□□ 0.39
IRF8-203ENST00000563180 DDX56Q9NY93 547 aaKnown RBP17.51■□□□□ 0.39
IRF8-203ENST00000563180 MACROD2A1Z1Q3 448 aa17.5■□□□□ 0.39
IRF8-203ENST00000563180 ZSCAN5CA6NGD5 496 aaPredicted RBP17.5■□□□□ 0.39
IRF8-203ENST00000563180 RNASEH1O60930 286 aaKnown RBP17.5■□□□□ 0.39
IRF8-203ENST00000563180 P2RY2P41231 377 aa17.5■□□□□ 0.39
IRF8-203ENST00000563180 CLCN6P51797 869 aa17.5■□□□□ 0.39
IRF8-203ENST00000563180 GEMIN4P57678 1058 aaKnown RBP17.5■□□□□ 0.39
IRF8-203ENST00000563180 RPS14P62263 151 aaKnown RBP17.5■□□□□ 0.39
IRF8-203ENST00000563180 BYSLQ13895 437 aaKnown RBP17.5■□□□□ 0.39
IRF8-203ENST00000563180 SIM2Q14190 667 aaPredicted RBP17.5■□□□□ 0.39
IRF8-203ENST00000563180 IFI16Q16666 785 aaKnown RBP17.5■□□□□ 0.39
IRF8-203ENST00000563180 ODF2Q5BJF6 829 aa17.5■□□□□ 0.39
IRF8-203ENST00000563180 ZNF776Q68DI1 518 aaPredicted RBP17.5■□□□□ 0.39
IRF8-203ENST00000563180 C22orf39Q6P5X5 142 aa17.5■□□□□ 0.39
IRF8-203ENST00000563180 TP53INP2Q8IXH6 220 aa17.5■□□□□ 0.39
IRF8-203ENST00000563180 FRMD1Q8N878 549 aa17.5■□□□□ 0.39
IRF8-203ENST00000563180 KIAA1524Q8TCG1 905 aa17.5■□□□□ 0.39
IRF8-203ENST00000563180 RNF25Q96BH1 459 aaPredicted RBP17.5■□□□□ 0.39
IRF8-203ENST00000563180 RSPH9Q9H1X1 276 aaPredicted RBP17.5■□□□□ 0.39
IRF8-203ENST00000563180 TNKS2Q9H2K2 1166 aa17.5■□□□□ 0.39
IRF8-203ENST00000563180 FCF1Q9Y324 198 aaKnown RBP17.5■□□□□ 0.39
IRF8-203ENST00000563180 CXorf51AA0A1B0GTR3 108 aa17.49■□□□□ 0.39
IRF8-203ENST00000563180 GRID2IPA4D2P6 1211 aa17.49■□□□□ 0.39
IRF8-203ENST00000563180 J3KR12 359 aa17.49■□□□□ 0.39
IRF8-203ENST00000563180 PSTPIP1O43586 416 aa17.49■□□□□ 0.39
IRF8-203ENST00000563180 PTMAP06454 111 aaKnown RBP17.49■□□□□ 0.39
IRF8-203ENST00000563180 ACADMP11310 421 aa17.49■□□□□ 0.39
IRF8-203ENST00000563180 DNA2P51530 1060 aa17.49■□□□□ 0.39
IRF8-203ENST00000563180 MAP7D1Q3KQU3 841 aa17.49■□□□□ 0.39
IRF8-203ENST00000563180 PRR23BQ6ZRT6 265 aa17.49■□□□□ 0.39
IRF8-203ENST00000563180 METTL3Q86U44 580 aaKnown RBP17.49■□□□□ 0.39
IRF8-203ENST00000563180 FAM160A2Q8N612 972 aaPredicted RBP17.49■□□□□ 0.39
IRF8-203ENST00000563180 FAF2Q96CS3 445 aa17.49■□□□□ 0.39
IRF8-203ENST00000563180 CEP44Q9C0F1 390 aa17.49■□□□□ 0.39
IRF8-203ENST00000563180 SEMA4AQ9H3S1 761 aa17.49■□□□□ 0.39
IRF8-203ENST00000563180 CD93Q9NPY3 652 aa17.49■□□□□ 0.39
IRF8-203ENST00000563180 ITM2CQ9NQX7 267 aa17.49■□□□□ 0.39
IRF8-203ENST00000563180 CYP8B1Q9UNU6 501 aa17.49■□□□□ 0.39
IRF8-203ENST00000563180 PLXND1Q9Y4D7 1925 aa17.49■□□□□ 0.39
IRF8-203ENST00000563180 C3orf70A6NLC5 250 aaPredicted RBP17.48■□□□□ 0.39
IRF8-203ENST00000563180 PRAMEF11O60813 436 aa17.48■□□□□ 0.39
IRF8-203ENST00000563180 ZNF217O75362 1048 aa17.48■□□□□ 0.39
IRF8-203ENST00000563180 DNTTP04053 509 aa17.48■□□□□ 0.39
IRF8-203ENST00000563180 SERPINB6P35237 376 aa17.48■□□□□ 0.39
IRF8-203ENST00000563180 ELAVL3Q14576 367 aaKnown RBP17.48■□□□□ 0.39
IRF8-203ENST00000563180 LPAL2Q16609 132 aa17.48■□□□□ 0.39
IRF8-203ENST00000563180 ARHGAP36Q6ZRI8 547 aa17.48■□□□□ 0.39
IRF8-203ENST00000563180 MMAAQ8IVH4 418 aaKnown RBP17.48■□□□□ 0.39
IRF8-203ENST00000563180 PCDH20Q8N6Y1 951 aaKnown RBP17.48■□□□□ 0.39
IRF8-203ENST00000563180 PQLC3Q8N755 202 aa17.48■□□□□ 0.39
IRF8-203ENST00000563180 LRRC57Q8N9N7 239 aa17.48■□□□□ 0.39
IRF8-203ENST00000563180 OR8D1Q8WZ84 308 aa17.48■□□□□ 0.39
IRF8-203ENST00000563180 PDLIM2Q96JY6 352 aa17.48■□□□□ 0.39
IRF8-203ENST00000563180 SPACA7Q96KW9 195 aa17.48■□□□□ 0.39
IRF8-203ENST00000563180 CCDC114Q96M63 670 aa17.48■□□□□ 0.39
IRF8-203ENST00000563180 RNF157Q96PX1 679 aa17.48■□□□□ 0.39
IRF8-203ENST00000563180 TSGA10Q9BZW7 698 aa17.48■□□□□ 0.39
IRF8-203ENST00000563180 EPC1Q9H2F5 836 aa17.48■□□□□ 0.39
IRF8-203ENST00000563180 UBA2Q9UBT2 640 aaPredicted RBP17.48■□□□□ 0.39
IRF8-203ENST00000563180 MBD1Q9UIS9 605 aaPredicted RBP17.48■□□□□ 0.39
IRF8-203ENST00000563180 FARP1Q9Y4F1 1045 aaPredicted RBP17.48■□□□□ 0.39
IRF8-203ENST00000563180 PROB1E7EW31 1015 aa17.47■□□□□ 0.39
IRF8-203ENST00000563180 MAP3K13O43283 966 aa17.47■□□□□ 0.39
IRF8-203ENST00000563180 ZNF821O75541 412 aaPredicted RBP17.47■□□□□ 0.39
IRF8-203ENST00000563180 PALMO75781 387 aa17.47■□□□□ 0.39
IRF8-203ENST00000563180 CCDC175P0C221 793 aa17.47■□□□□ 0.39
IRF8-203ENST00000563180 BCKDHBP21953 392 aa17.47■□□□□ 0.39
IRF8-203ENST00000563180 RECQLP46063 649 aaPredicted RBP17.47■□□□□ 0.39
IRF8-203ENST00000563180 PSMD8P48556 350 aa17.47■□□□□ 0.39
IRF8-203ENST00000563180 MARCKSL1P49006 195 aa17.47■□□□□ 0.39
IRF8-203ENST00000563180 TPMTP51580 245 aa17.47■□□□□ 0.39
IRF8-203ENST00000563180 PAFAH1B3Q15102 231 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms