RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 FYNP06241 537 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 SRGAP2BP0DMP2 458 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 IRF9Q00978 393 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 TMEM62Q0P6H9 643 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 SLC12A1Q13621 1099 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 CYLC2Q14093 348 aaPredicted RBP13.32□□□□□ -0.28
USB1-207ENST00000563149 MMEL1Q495T6 779 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 CERCAMQ5T4B2 595 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 FAM72AQ5TYM5 149 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 RASIP1Q5U651 963 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 AP1ARQ63HQ0 302 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 FAM72DQ6L9T8 149 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 FAM72BQ86X60 149 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 CCDC117Q8IWD4 279 aaPredicted RBP13.32□□□□□ -0.28
USB1-207ENST00000563149 TP53INP2Q8IXH6 220 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 PQLC1Q8N2U9 271 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 NETO2Q8NC67 525 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 CCDC124Q96CT7 223 aaKnown RBP13.32□□□□□ -0.28
USB1-207ENST00000563149 OR52B2Q96RD2 323 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 EPAS1Q99814 870 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 SPATA16Q9BXB7 569 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 OXCT2Q9BYC2 517 aaPredicted RBP13.32□□□□□ -0.28
USB1-207ENST00000563149 SHCBP1LQ9BZQ2 653 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 ABHD16BQ9H3Z7 469 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 EPB41L1Q9H4G0 881 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 Q9H521 79 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 ZNF385DQ9H6B1 395 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 TASP1Q9H6P5 420 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 DMAP1Q9NPF5 467 aaPredicted RBP13.32□□□□□ -0.28
USB1-207ENST00000563149 MAN1C1Q9NR34 630 aa13.32□□□□□ -0.28
USB1-207ENST00000563149 PIN4Q9Y237 131 aaKnown RBP13.32□□□□□ -0.28
USB1-207ENST00000563149 CLDN5O00501 218 aa13.31□□□□□ -0.28
USB1-207ENST00000563149 DENRO43583 198 aaKnown RBP13.31□□□□□ -0.28
USB1-207ENST00000563149 USP12O75317 370 aa13.31□□□□□ -0.28
USB1-207ENST00000563149 DDNO94850 711 aaPredicted RBP13.31□□□□□ -0.28
USB1-207ENST00000563149 PABPC4LP0CB38 370 aaKnown RBP13.31□□□□□ -0.28
USB1-207ENST00000563149 NFKB1P19838 968 aa13.31□□□□□ -0.28
USB1-207ENST00000563149 PEX2P28328 305 aa13.31□□□□□ -0.28
USB1-207ENST00000563149 PPARGP37231 505 aaPredicted RBP13.31□□□□□ -0.28
USB1-207ENST00000563149 ALDH1A3P47895 512 aa13.31□□□□□ -0.28
USB1-207ENST00000563149 AQP4P55087 323 aa13.31□□□□□ -0.28
USB1-207ENST00000563149 SOX4Q06945 474 aaPredicted RBP13.31□□□□□ -0.28
USB1-207ENST00000563149 OLIG2Q13516 323 aa13.31□□□□□ -0.28
USB1-207ENST00000563149 RFTN1Q14699 578 aaPredicted RBP13.31□□□□□ -0.28
USB1-207ENST00000563149 GRM3Q14832 879 aa13.31□□□□□ -0.28
USB1-207ENST00000563149 LSM12Q3MHD2 195 aaKnown RBP13.31□□□□□ -0.28
USB1-207ENST00000563149 RAB41Q5JT25 222 aa13.31□□□□□ -0.28
USB1-207ENST00000563149 TCHHL1Q5QJ38 904 aaPredicted RBP13.31□□□□□ -0.28
USB1-207ENST00000563149 UBXN11Q5T124 520 aa13.31□□□□□ -0.28
USB1-207ENST00000563149 HFE2Q6ZVN8 426 aa13.31□□□□□ -0.28
USB1-207ENST00000563149 ZC3HC1Q86WB0 502 aaKnown RBP13.31□□□□□ -0.28
USB1-207ENST00000563149 PGAM4Q8N0Y7 254 aa13.31□□□□□ -0.28
USB1-207ENST00000563149 TMEM151AQ8N4L1 468 aa13.31□□□□□ -0.28
USB1-207ENST00000563149 STYXQ8WUJ0 223 aa13.31□□□□□ -0.28
USB1-207ENST00000563149 DLG3Q92796 817 aa13.31□□□□□ -0.28
USB1-207ENST00000563149 ATXN7L3BQ96GX2 97 aa13.31□□□□□ -0.28
USB1-207ENST00000563149 PPP1R2P1Q96PQ5 205 aa13.31□□□□□ -0.28
USB1-207ENST00000563149 ULBP1Q9BZM6 244 aa13.31□□□□□ -0.28
USB1-207ENST00000563149 CAB39LQ9H9S4 337 aa13.31□□□□□ -0.28
USB1-207ENST00000563149 KLK14Q9P0G3 267 aa13.31□□□□□ -0.28
USB1-207ENST00000563149 SLC45A1Q9Y2W3 748 aa13.31□□□□□ -0.28
USB1-207ENST00000563149 AAR2Q9Y312 384 aaKnown RBP13.31□□□□□ -0.28
USB1-207ENST00000563149 DTNAQ9Y4J8 743 aa13.31□□□□□ -0.28
USB1-207ENST00000563149 MYO18AQ92614 2054 aaKnown RBP13.31□□□□□ -0.28
USB1-207ENST00000563149 SBF1O95248 1867 aa13.31□□□□□ -0.28
USB1-207ENST00000563149 SMIM31A0A1B0GVY4 71 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 E2F8A0AVK6 867 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 NRP1O14786 923 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 GRID2O43424 1007 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 TADA2AO75478 443 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 SORBS2O94875 1100 aaKnown RBP13.3□□□□□ -0.28
USB1-207ENST00000563149 PIGNO95427 931 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 LTFP02788 710 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 SMIM10L2AP0DMW4 78 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 SMIM10L2BP0DMW5 78 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 TFEBP19484 476 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 SERPINB5P36952 375 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 GMPRP36959 345 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 GRIA4P48058 902 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 LHX1P48742 406 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 CHN2P52757 468 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 MAP3K7CLP57077 242 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 ZBTB17Q13105 803 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 SNX17Q15036 470 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 PDK3Q15120 406 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 DLG2Q15700 870 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 CNPY1Q3B7I2 92 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 PCID2Q5JVF3 399 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 SH2D4BQ5SQS7 431 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 BNC2Q6ZN30 1099 aaPredicted RBP13.3□□□□□ -0.28
USB1-207ENST00000563149 MOB2Q70IA6 237 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 CNTN4Q8IWV2 1026 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 DSELQ8IZU8 1212 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 TMEM86AQ8N2M4 240 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 MARVELD2Q8N4S9 558 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 CNTD1Q8N815 330 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 RNF169Q8NCN4 708 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 DPF3Q92784 378 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 SGIP1Q9BQI5 828 aa13.3□□□□□ -0.28
USB1-207ENST00000563149 CHRAC1Q9NRG0 131 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms