RNA–Protein interactions for RNA: ENST00000563065.5

CCNDBP1-204, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-204ENST00000563065 LLGL1Q15334 1064 aa17.82■□□□□ 0.44
CCNDBP1-204ENST00000563065 LRRC38Q5VT99 294 aa17.82■□□□□ 0.44
CCNDBP1-204ENST00000563065 KIAA1324Q6UXG2 1013 aaKnown RBP17.82■□□□□ 0.44
CCNDBP1-204ENST00000563065 Q6ZVU0 165 aa17.82■□□□□ 0.44
CCNDBP1-204ENST00000563065 STK40Q8N2I9 435 aa17.82■□□□□ 0.44
CCNDBP1-204ENST00000563065 FAM160A2Q8N612 972 aaPredicted RBP17.82■□□□□ 0.44
CCNDBP1-204ENST00000563065 LRRC57Q8N9N7 239 aa17.82■□□□□ 0.44
CCNDBP1-204ENST00000563065 OR2T3Q8NH03 318 aa17.82■□□□□ 0.44
CCNDBP1-204ENST00000563065 ANP32BQ92688 251 aaKnown RBP17.82■□□□□ 0.44
CCNDBP1-204ENST00000563065 KRT35Q92764 455 aa17.82■□□□□ 0.44
CCNDBP1-204ENST00000563065 TNKS2Q9H2K2 1166 aa17.82■□□□□ 0.44
CCNDBP1-204ENST00000563065 KCNF1Q9H3M0 494 aa17.82■□□□□ 0.44
CCNDBP1-204ENST00000563065 PRDM16Q9HAZ2 1276 aa17.82■□□□□ 0.44
CCNDBP1-204ENST00000563065 PCDHGA2Q9Y5H1 932 aa17.82■□□□□ 0.44
CCNDBP1-204ENST00000563065 EML5Q05BV3 1969 aa17.82■□□□□ 0.44
CCNDBP1-204ENST00000563065 EDDM13A0A1B0GTR0 161 aa17.82■□□□□ 0.44
CCNDBP1-204ENST00000563065 KRT1P04264 644 aa17.82■□□□□ 0.44
CCNDBP1-204ENST00000563065 ETFBP38117 255 aa17.82■□□□□ 0.44
CCNDBP1-204ENST00000563065 VASPP50552 380 aaPredicted RBP17.82■□□□□ 0.44
CCNDBP1-204ENST00000563065 PARP15Q460N3 678 aa17.82■□□□□ 0.44
CCNDBP1-204ENST00000563065 RETSATQ6NUM9 610 aa17.82■□□□□ 0.44
CCNDBP1-204ENST00000563065 TMCO3Q6UWJ1 677 aa17.82■□□□□ 0.44
CCNDBP1-204ENST00000563065 PQLC3Q8N755 202 aa17.82■□□□□ 0.44
CCNDBP1-204ENST00000563065 FAM129BQ96TA1 746 aa17.82■□□□□ 0.44
CCNDBP1-204ENST00000563065 HPCAL4Q9UM19 191 aa17.82■□□□□ 0.44
CCNDBP1-204ENST00000563065 GUCA1BQ9UMX6 200 aa17.82■□□□□ 0.44
CCNDBP1-204ENST00000563065 CCDC163A0A0D9SF12 145 aa17.81■□□□□ 0.44
CCNDBP1-204ENST00000563065 TARSL2A2RTX5 802 aaKnown RBP17.81■□□□□ 0.44
CCNDBP1-204ENST00000563065 PALMO75781 387 aa17.81■□□□□ 0.44
CCNDBP1-204ENST00000563065 MAP3K6O95382 1288 aa17.81■□□□□ 0.44
CCNDBP1-204ENST00000563065 PTMAP06454 111 aaKnown RBP17.81■□□□□ 0.44
CCNDBP1-204ENST00000563065 SERPINH1P50454 418 aaKnown RBP17.81■□□□□ 0.44
CCNDBP1-204ENST00000563065 NCBP2-AS2Q69YL0 99 aa17.81■□□□□ 0.44
CCNDBP1-204ENST00000563065 MFSD7Q6UXD7 560 aa17.81■□□□□ 0.44
CCNDBP1-204ENST00000563065 MAP7D3Q8IWC1 876 aa17.81■□□□□ 0.44
CCNDBP1-204ENST00000563065 KIAA1524Q8TCG1 905 aa17.81■□□□□ 0.44
CCNDBP1-204ENST00000563065 FAF2Q96CS3 445 aa17.81■□□□□ 0.44
CCNDBP1-204ENST00000563065 SIPA1Q96FS4 1042 aa17.81■□□□□ 0.44
CCNDBP1-204ENST00000563065 ZNF670Q9BS34 389 aa17.81■□□□□ 0.44
CCNDBP1-204ENST00000563065 IRF2BPLQ9H1B7 796 aa17.81■□□□□ 0.44
CCNDBP1-204ENST00000563065 RCOR3Q9P2K3 495 aaPredicted RBP17.81■□□□□ 0.44
CCNDBP1-204ENST00000563065 FANCMQ8IYD8 2048 aa17.8■□□□□ 0.44
CCNDBP1-204ENST00000563065 NYNRINQ9P2P1 1898 aaKnown RBP17.8■□□□□ 0.44
CCNDBP1-204ENST00000563065 ARHGAP42A6NI28 874 aa17.8■□□□□ 0.44
CCNDBP1-204ENST00000563065 RNF103O00237 685 aa17.8■□□□□ 0.44
CCNDBP1-204ENST00000563065 ZBTB24O43167 697 aaPredicted RBP17.8■□□□□ 0.44
CCNDBP1-204ENST00000563065 DNA2P51530 1060 aa17.8■□□□□ 0.44
CCNDBP1-204ENST00000563065 RPS14P62263 151 aaKnown RBP17.8■□□□□ 0.44
CCNDBP1-204ENST00000563065 LPAL2Q16609 132 aa17.8■□□□□ 0.44
CCNDBP1-204ENST00000563065 MAP7D1Q3KQU3 841 aa17.8■□□□□ 0.44
CCNDBP1-204ENST00000563065 C22orf39Q6P5X5 142 aa17.8■□□□□ 0.44
CCNDBP1-204ENST00000563065 MMAAQ8IVH4 418 aaKnown RBP17.8■□□□□ 0.44
CCNDBP1-204ENST00000563065 LRRN4Q8WUT4 740 aa17.8■□□□□ 0.44
CCNDBP1-204ENST00000563065 PRCCQ92733 491 aaPredicted RBP17.8■□□□□ 0.44
CCNDBP1-204ENST00000563065 RNF157Q96PX1 679 aa17.8■□□□□ 0.44
CCNDBP1-204ENST00000563065 RSPH9Q9H1X1 276 aaPredicted RBP17.8■□□□□ 0.44
CCNDBP1-204ENST00000563065 LZTFL1Q9NQ48 299 aa17.8■□□□□ 0.44
CCNDBP1-204ENST00000563065 DONSONQ9NYP3 566 aa17.8■□□□□ 0.44
CCNDBP1-204ENST00000563065 MBD1Q9UIS9 605 aaPredicted RBP17.8■□□□□ 0.44
CCNDBP1-204ENST00000563065 PACSIN2Q9UNF0 486 aaPredicted RBP17.8■□□□□ 0.44
CCNDBP1-204ENST00000563065 CYP8B1Q9UNU6 501 aa17.8■□□□□ 0.44
CCNDBP1-204ENST00000563065 CAPN6Q9Y6Q1 641 aa17.8■□□□□ 0.44
CCNDBP1-204ENST00000563065 SDK1Q7Z5N4 2213 aa17.8■□□□□ 0.44
CCNDBP1-204ENST00000563065 FRYLO94915 3013 aa17.79■□□□□ 0.44
CCNDBP1-204ENST00000563065 PSTPIP1O43586 416 aa17.79■□□□□ 0.44
CCNDBP1-204ENST00000563065 MFSD11O43934 449 aa17.79■□□□□ 0.44
CCNDBP1-204ENST00000563065 RPP40O75818 363 aaKnown RBP17.79■□□□□ 0.44
CCNDBP1-204ENST00000563065 FTCDO95954 541 aa17.79■□□□□ 0.44
CCNDBP1-204ENST00000563065 CCDC175P0C221 793 aa17.79■□□□□ 0.44
CCNDBP1-204ENST00000563065 BCKDHBP21953 392 aa17.79■□□□□ 0.44
CCNDBP1-204ENST00000563065 NBL1P41271 181 aa17.79■□□□□ 0.44
CCNDBP1-204ENST00000563065 METAP1P53582 386 aa17.79■□□□□ 0.44
CCNDBP1-204ENST00000563065 SLC20A2Q08357 652 aa17.79■□□□□ 0.44
CCNDBP1-204ENST00000563065 USP39Q53GS9 565 aaKnown RBP17.79■□□□□ 0.44
CCNDBP1-204ENST00000563065 NT5DC3Q86UY8 548 aa17.79■□□□□ 0.44
CCNDBP1-204ENST00000563065 ABCA7Q8IZY2 2146 aa17.79■□□□□ 0.44
CCNDBP1-204ENST00000563065 TXLNBQ8N3L3 684 aa17.79■□□□□ 0.44
CCNDBP1-204ENST00000563065 LZTR1Q8N653 840 aa17.79■□□□□ 0.44
CCNDBP1-204ENST00000563065 CHST14Q8NCH0 376 aa17.79■□□□□ 0.44
CCNDBP1-204ENST00000563065 OR2A12Q8NGT7 310 aa17.79■□□□□ 0.44
CCNDBP1-204ENST00000563065 GAB3Q8WWW8 586 aa17.79■□□□□ 0.44
CCNDBP1-204ENST00000563065 TM6SF2Q9BZW4 377 aa17.79■□□□□ 0.44
CCNDBP1-204ENST00000563065 PDFQ9HBH1 243 aa17.79■□□□□ 0.44
CCNDBP1-204ENST00000563065 DDX56Q9NY93 547 aaKnown RBP17.79■□□□□ 0.44
CCNDBP1-204ENST00000563065 SARDHQ9UL12 918 aa17.79■□□□□ 0.44
CCNDBP1-204ENST00000563065 PRAMEF11O60813 436 aa17.78■□□□□ 0.44
CCNDBP1-204ENST00000563065 KRT10P13645 584 aa17.78■□□□□ 0.44
CCNDBP1-204ENST00000563065 P2RY2P41231 377 aa17.78■□□□□ 0.44
CCNDBP1-204ENST00000563065 CLCN6P51797 869 aa17.78■□□□□ 0.44
CCNDBP1-204ENST00000563065 GBE1Q04446 702 aa17.78■□□□□ 0.44
CCNDBP1-204ENST00000563065 SLC10A2Q12908 348 aaPredicted RBP17.78■□□□□ 0.44
CCNDBP1-204ENST00000563065 SIM2Q14190 667 aaPredicted RBP17.78■□□□□ 0.44
CCNDBP1-204ENST00000563065 CYTH1Q15438 398 aa17.78■□□□□ 0.44
CCNDBP1-204ENST00000563065 POM121L1PQ3SYA9 428 aa17.78■□□□□ 0.44
CCNDBP1-204ENST00000563065 ZC3H14Q6PJT7 736 aaKnown RBP17.78■□□□□ 0.44
CCNDBP1-204ENST00000563065 DPY19L3Q6ZPD9 716 aa17.78■□□□□ 0.44
CCNDBP1-204ENST00000563065 PRR23BQ6ZRT6 265 aa17.78■□□□□ 0.44
CCNDBP1-204ENST00000563065 KBTBD6Q86V97 674 aa17.78■□□□□ 0.44
CCNDBP1-204ENST00000563065 CALR3Q96L12 384 aaKnown RBP17.78■□□□□ 0.44
CCNDBP1-204ENST00000563065 IPO11Q9UI26 975 aaKnown RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms