RNA–Protein interactions for RNA: ENST00000562542.1

KATNB1-202, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-202ENST00000562542 FOXD4L6Q3SYB3 417 aaPredicted RBP18.89■□□□□ 0.61
KATNB1-202ENST00000562542 ZC3H12AQ5D1E8 599 aaKnown RBP18.89■□□□□ 0.61
KATNB1-202ENST00000562542 PERM1Q5SV97 790 aa18.89■□□□□ 0.61
KATNB1-202ENST00000562542 RESP18Q5W5W9 173 aa18.89■□□□□ 0.61
KATNB1-202ENST00000562542 SEL1L3Q68CR1 1132 aa18.89■□□□□ 0.61
KATNB1-202ENST00000562542 LCLAT1Q6UWP7 414 aa18.89■□□□□ 0.61
KATNB1-202ENST00000562542 FOXD4L3Q6VB84 417 aaPredicted RBP18.89■□□□□ 0.61
KATNB1-202ENST00000562542 TAC4Q86UU9 113 aa18.89■□□□□ 0.61
KATNB1-202ENST00000562542 PARGQ86W56 976 aa18.89■□□□□ 0.61
KATNB1-202ENST00000562542 FAM174AQ8TBP5 190 aa18.89■□□□□ 0.61
KATNB1-202ENST00000562542 SLC35F5Q8WV83 523 aa18.89■□□□□ 0.61
KATNB1-202ENST00000562542 BTN2A3PQ96KV6 586 aa18.89■□□□□ 0.61
KATNB1-202ENST00000562542 PPP1R9BQ96SB3 815 aa18.89■□□□□ 0.61
KATNB1-202ENST00000562542 CSNK1G3Q9Y6M4 447 aa18.89■□□□□ 0.61
KATNB1-202ENST00000562542 FYNP06241 537 aa18.88■□□□□ 0.61
KATNB1-202ENST00000562542 ITGB6P18564 788 aa18.88■□□□□ 0.61
KATNB1-202ENST00000562542 SLC5A2P31639 672 aa18.88■□□□□ 0.61
KATNB1-202ENST00000562542 PLK1P53350 603 aa18.88■□□□□ 0.61
KATNB1-202ENST00000562542 SRSF6Q13247 344 aaKnown RBP18.88■□□□□ 0.61
KATNB1-202ENST00000562542 MAPK8IP2Q13387 824 aaPredicted RBP18.88■□□□□ 0.61
KATNB1-202ENST00000562542 FZD2Q14332 565 aa18.88■□□□□ 0.61
KATNB1-202ENST00000562542 TGIF1Q15583 401 aa18.88■□□□□ 0.61
KATNB1-202ENST00000562542 RABGAP1LQ5R372 815 aa18.88■□□□□ 0.61
KATNB1-202ENST00000562542 C14orf80Q86SX3 495 aa18.88■□□□□ 0.61
KATNB1-202ENST00000562542 WDR48Q8TAF3 677 aa18.88■□□□□ 0.61
KATNB1-202ENST00000562542 GLMNQ92990 594 aa18.88■□□□□ 0.61
KATNB1-202ENST00000562542 CCDC47Q96A33 483 aaKnown RBP18.88■□□□□ 0.61
KATNB1-202ENST00000562542 CCDC114Q96M63 670 aa18.88■□□□□ 0.61
KATNB1-202ENST00000562542 SALL4Q9UJQ4 1053 aa18.88■□□□□ 0.61
KATNB1-202ENST00000562542 VPS28Q9UK41 221 aa18.88■□□□□ 0.61
KATNB1-202ENST00000562542 ZFR2Q9UPR6 939 aaKnown RBP18.88■□□□□ 0.61
KATNB1-202ENST00000562542 TEX15Q9BXT5 2789 aa18.88■□□□□ 0.61
KATNB1-202ENST00000562542 TCAF2A6NFQ2 919 aa18.87■□□□□ 0.61
KATNB1-202ENST00000562542 PLD2O14939 933 aa18.87■□□□□ 0.61
KATNB1-202ENST00000562542 ACTN4O43707 911 aaKnown RBP18.87■□□□□ 0.61
KATNB1-202ENST00000562542 PPFIA2O75334 1257 aa18.87■□□□□ 0.61
KATNB1-202ENST00000562542 GP1BBP13224 206 aa18.87■□□□□ 0.61
KATNB1-202ENST00000562542 JUNDP17535 347 aa18.87■□□□□ 0.61
KATNB1-202ENST00000562542 UBAP2LQ14157 1087 aaKnown RBP18.87■□□□□ 0.61
KATNB1-202ENST00000562542 FLNCQ14315 2725 aa18.87■□□□□ 0.61
KATNB1-202ENST00000562542 TTC39BQ5VTQ0 682 aaPredicted RBP18.87■□□□□ 0.61
KATNB1-202ENST00000562542 FOXD4L5Q5VV16 416 aaPredicted RBP18.87■□□□□ 0.61
KATNB1-202ENST00000562542 TCERG1LQ5VWI1 586 aa18.87■□□□□ 0.61
KATNB1-202ENST00000562542 FBXO39Q8N4B4 442 aa18.87■□□□□ 0.61
KATNB1-202ENST00000562542 FOXD4L4Q8WXT5 416 aaPredicted RBP18.87■□□□□ 0.61
KATNB1-202ENST00000562542 TFAP2BQ92481 460 aa18.87■□□□□ 0.61
KATNB1-202ENST00000562542 NAT6Q93015 286 aa18.87■□□□□ 0.61
KATNB1-202ENST00000562542 HSFY1Q96LI6 401 aa18.87■□□□□ 0.61
KATNB1-202ENST00000562542 EPB41L5Q9HCM4 733 aa18.87■□□□□ 0.61
KATNB1-202ENST00000562542 SLC12A6Q9UHW9 1150 aa18.87■□□□□ 0.61
KATNB1-202ENST00000562542 PCDHA7Q9UN72 937 aa18.87■□□□□ 0.61
KATNB1-202ENST00000562542 COL27A1Q8IZC6 1860 aaPredicted RBP18.86■□□□□ 0.61
KATNB1-202ENST00000562542 SPTY2D1-AS1A0A0U1RR47 76 aa18.86■□□□□ 0.61
KATNB1-202ENST00000562542 POM121BA6NF01 834 aa18.86■□□□□ 0.61
KATNB1-202ENST00000562542 CASC3O15234 703 aaKnown RBP18.86■□□□□ 0.61
KATNB1-202ENST00000562542 CTSLP07711 333 aa18.86■□□□□ 0.61
KATNB1-202ENST00000562542 EPB41P11171 864 aaKnown RBP18.86■□□□□ 0.61
KATNB1-202ENST00000562542 CHRNA3P32297 505 aa18.86■□□□□ 0.61
KATNB1-202ENST00000562542 VASPP50552 380 aaPredicted RBP18.86■□□□□ 0.61
KATNB1-202ENST00000562542 LRMPQ12912 555 aa18.86■□□□□ 0.61
KATNB1-202ENST00000562542 DCAF17Q5H9S7 520 aaPredicted RBP18.86■□□□□ 0.61
KATNB1-202ENST00000562542 CXorf57Q6NSI4 855 aaKnown RBP18.86■□□□□ 0.61
KATNB1-202ENST00000562542 TMEM270Q6UE05 265 aa18.86■□□□□ 0.61
KATNB1-202ENST00000562542 KYAT3Q6YP21 454 aaKnown RBP18.86■□□□□ 0.61
KATNB1-202ENST00000562542 SH2D3CQ8N5H7 860 aa18.86■□□□□ 0.61
KATNB1-202ENST00000562542 ATP6V0D2Q8N8Y2 350 aa18.86■□□□□ 0.61
KATNB1-202ENST00000562542 ZSCAN1Q8NBB4 408 aa18.86■□□□□ 0.61
KATNB1-202ENST00000562542 BMFQ96LC9 184 aa18.86■□□□□ 0.61
KATNB1-202ENST00000562542 CCDC3Q9BQI4 270 aa18.86■□□□□ 0.61
KATNB1-202ENST00000562542 ST7Q9NRC1 585 aa18.86■□□□□ 0.61
KATNB1-202ENST00000562542 PCDHGA7Q9Y5G6 932 aa18.86■□□□□ 0.61
KATNB1-202ENST00000562542 HS3ST3A1Q9Y663 406 aa18.86■□□□□ 0.61
KATNB1-202ENST00000562542 AHCTF1Q8WYP5 2266 aa18.86■□□□□ 0.61
KATNB1-202ENST00000562542 KIF26BQ2KJY2 2108 aa18.85■□□□□ 0.61
KATNB1-202ENST00000562542 SART1O43290 800 aaKnown RBP18.85■□□□□ 0.61
KATNB1-202ENST00000562542 RABIFP47224 123 aa18.85■□□□□ 0.61
KATNB1-202ENST00000562542 PDX1P52945 283 aa18.85■□□□□ 0.61
KATNB1-202ENST00000562542 CENPCQ03188 943 aa18.85■□□□□ 0.61
KATNB1-202ENST00000562542 PDE1CQ14123 709 aaPredicted RBP18.85■□□□□ 0.61
KATNB1-202ENST00000562542 CBWD6Q4V339 395 aa18.85■□□□□ 0.61
KATNB1-202ENST00000562542 CBWD3Q5JTY5 395 aa18.85■□□□□ 0.61
KATNB1-202ENST00000562542 CBWD5Q5RIA9 395 aa18.85■□□□□ 0.61
KATNB1-202ENST00000562542 MANEAQ5SRI9 462 aa18.85■□□□□ 0.61
KATNB1-202ENST00000562542 SYPL2Q5VXT5 272 aa18.85■□□□□ 0.61
KATNB1-202ENST00000562542 ERN2Q76MJ5 926 aaKnown RBP18.85■□□□□ 0.61
KATNB1-202ENST00000562542 RAB11FIP2Q7L804 512 aa18.85■□□□□ 0.61
KATNB1-202ENST00000562542 ATP11CQ8NB49 1132 aa18.85■□□□□ 0.61
KATNB1-202ENST00000562542 GRIN3AQ8TCU5 1115 aa18.85■□□□□ 0.61
KATNB1-202ENST00000562542 LIN37Q96GY3 246 aaPredicted RBP18.85■□□□□ 0.61
KATNB1-202ENST00000562542 RPRD1AQ96P16 312 aaPredicted RBP18.85■□□□□ 0.61
KATNB1-202ENST00000562542 SEMA3CQ99985 751 aa18.85■□□□□ 0.61
KATNB1-202ENST00000562542 FEM1AQ9BSK4 669 aa18.85■□□□□ 0.61
KATNB1-202ENST00000562542 TRIM62Q9BVG3 475 aa18.85■□□□□ 0.61
KATNB1-202ENST00000562542 SLC17A9Q9BYT1 436 aa18.85■□□□□ 0.61
KATNB1-202ENST00000562542 STRADBQ9C0K7 418 aa18.85■□□□□ 0.61
KATNB1-202ENST00000562542 SEPT10Q9P0V9 454 aa18.85■□□□□ 0.61
KATNB1-202ENST00000562542 KLF15Q9UIH9 416 aa18.85■□□□□ 0.61
KATNB1-202ENST00000562542 TLN1Q9Y490 2541 aaKnown RBP18.84■□□□□ 0.61
KATNB1-202ENST00000562542 KCNU1A8MYU2 1149 aa18.84■□□□□ 0.61
KATNB1-202ENST00000562542 TPP1O14773 563 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms