RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 MOCS1Q9NZB8 636 aa9.71□□□□□ -0.86
CDH13-205ENST00000562307 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.71□□□□□ -0.86
CDH13-205ENST00000562307 PSMC3IPQ9P2W1 217 aaPredicted RBP9.71□□□□□ -0.86
CDH13-205ENST00000562307 ZNF510Q9Y2H8 683 aa9.71□□□□□ -0.86
CDH13-205ENST00000562307 CPQQ9Y646 472 aa9.71□□□□□ -0.86
CDH13-205ENST00000562307 MKI67P46013 3256 aaKnown RBP9.7□□□□□ -0.86
CDH13-205ENST00000562307 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.7□□□□□ -0.86
CDH13-205ENST00000562307 TRAV19A0A0A6YYK7 116 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 A0A1B0GVM2 712 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 TCAF2A6NFQ2 919 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 FAM159BA6NKW6 160 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 F5H423 210 aaPredicted RBP9.7□□□□□ -0.86
CDH13-205ENST00000562307 POC1B-GALNT4F8VUJ3 575 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 KDELR3O43731 214 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 SLC34A2O95436 690 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 MYOGP15173 224 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 PGAM1P18669 254 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 DDX6P26196 483 aaKnown RBP eCLIP9.7□□□□□ -0.86
CDH13-205ENST00000562307 MGAT1P26572 445 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 HOXD9P28356 352 aaPredicted RBP9.7□□□□□ -0.86
CDH13-205ENST00000562307 HPDP32754 393 aaPredicted RBP9.7□□□□□ -0.86
CDH13-205ENST00000562307 IRS1P35568 1242 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 MDH1P40925 334 aaKnown RBP9.7□□□□□ -0.86
CDH13-205ENST00000562307 MSH2P43246 934 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 RPS24P62847 133 aaKnown RBP9.7□□□□□ -0.86
CDH13-205ENST00000562307 CYP4F8P98187 520 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 GNA12Q03113 381 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 SLC10A7Q0GE19 358 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 ZNF177Q13360 481 aaPredicted RBP9.7□□□□□ -0.86
CDH13-205ENST00000562307 MPP3Q13368 585 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 SPARCL1Q14515 664 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 RNF43Q68DV7 783 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 NAPEPLDQ6IQ20 393 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 DENND5AQ6IQ26 1287 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 KDELC1Q6UW63 502 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 RANBP10Q6VN20 620 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 CAPN12Q6ZSI9 719 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 SPRED2Q7Z698 418 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 PRPF39Q86UA1 669 aaKnown RBP9.7□□□□□ -0.86
CDH13-205ENST00000562307 TMEM135Q86UB9 458 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 TRABD2AQ86V40 505 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 CNPY4Q8N129 248 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 CPXM2Q8N436 756 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 LEMD2Q8NC56 503 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 MICAL1Q8TDZ2 1067 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 NSMCE1Q8WV22 266 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 TTC17Q96AE7 1141 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 IMP4Q96G21 291 aaKnown RBP9.7□□□□□ -0.86
CDH13-205ENST00000562307 CFAP36Q96G28 342 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 GCNAQ96QF7 691 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 PAFAH2Q99487 392 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 CAPS2Q9BXY5 557 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 SLC46A2Q9BY10 475 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 ATXN3LQ9H3M9 355 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 SP110Q9HB58 689 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 ARNT2Q9HBZ2 717 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 ASAH2Q9NR71 780 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 VPS45Q9NRW7 570 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 SMPD4Q9NXE4 827 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 BFARQ9NZS9 450 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 SENP1Q9P0U3 644 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 CTNNAL1Q9UBT7 734 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 DPP7Q9UHL4 492 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 ZNF180Q9UJW8 692 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 MAD1L1Q9Y6D9 718 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 DOCK4Q8N1I0 1966 aa9.7□□□□□ -0.86
CDH13-205ENST00000562307 FAM237BA0A1B0GVD1 139 aa9.69□□□□□ -0.86
CDH13-205ENST00000562307 A0A1W2PRU2 124 aa9.69□□□□□ -0.86
CDH13-205ENST00000562307 GRXCR1A8MXD5 290 aa9.69□□□□□ -0.86
CDH13-205ENST00000562307 NRG2O14511 850 aaPredicted RBP9.69□□□□□ -0.86
CDH13-205ENST00000562307 CCL16O15467 120 aa9.69□□□□□ -0.86
CDH13-205ENST00000562307 MOSPD3O75425 235 aa9.69□□□□□ -0.86
CDH13-205ENST00000562307 POLBP06746 335 aa9.69□□□□□ -0.86
CDH13-205ENST00000562307 CA3P07451 260 aa9.69□□□□□ -0.86
CDH13-205ENST00000562307 MMP2P08253 660 aa9.69□□□□□ -0.86
CDH13-205ENST00000562307 IRF1P10914 325 aa9.69□□□□□ -0.86
CDH13-205ENST00000562307 MYL4P12829 197 aa9.69□□□□□ -0.86
CDH13-205ENST00000562307 ETFBP38117 255 aa9.69□□□□□ -0.86
CDH13-205ENST00000562307 CCR2P41597 374 aa9.69□□□□□ -0.86
CDH13-205ENST00000562307 MAGEA10P43363 369 aaPredicted RBP9.69□□□□□ -0.86
CDH13-205ENST00000562307 ATP1A2P50993 1020 aa9.69□□□□□ -0.86
CDH13-205ENST00000562307 SGSHP51688 502 aa9.69□□□□□ -0.86
CDH13-205ENST00000562307 SLC18A1P54219 525 aa9.69□□□□□ -0.86
CDH13-205ENST00000562307 SESN2P58004 480 aaPredicted RBP9.69□□□□□ -0.86
CDH13-205ENST00000562307 NIPAL4Q0D2K0 466 aa9.69□□□□□ -0.86
CDH13-205ENST00000562307 CDH17Q12864 832 aa9.69□□□□□ -0.86
CDH13-205ENST00000562307 NAB1Q13506 487 aa9.69□□□□□ -0.86
CDH13-205ENST00000562307 OLIG2Q13516 323 aa9.69□□□□□ -0.86
CDH13-205ENST00000562307 RFTN1Q14699 578 aaPredicted RBP9.69□□□□□ -0.86
CDH13-205ENST00000562307 LBRQ14739 615 aaKnown RBP9.69□□□□□ -0.86
CDH13-205ENST00000562307 EFTUD2Q15029 972 aaKnown RBP eCLIP9.69□□□□□ -0.86
CDH13-205ENST00000562307 SHHQ15465 462 aa9.69□□□□□ -0.86
CDH13-205ENST00000562307 SLC14A2Q15849 920 aa9.69□□□□□ -0.86
CDH13-205ENST00000562307 SKIDA1Q1XH10 827 aa9.69□□□□□ -0.86
CDH13-205ENST00000562307 KBTBD12Q3ZCT8 623 aa9.69□□□□□ -0.86
CDH13-205ENST00000562307 SPANXN3Q5MJ09 141 aa9.69□□□□□ -0.86
CDH13-205ENST00000562307 MPP7Q5T2T1 576 aa9.69□□□□□ -0.86
CDH13-205ENST00000562307 TMCO4Q5TGY1 634 aa9.69□□□□□ -0.86
CDH13-205ENST00000562307 ALG1LQ6GMV1 187 aa9.69□□□□□ -0.86
CDH13-205ENST00000562307 FAM109BQ6ICB4 259 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms