RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 TARDBPQ13148 414 aaKnown RBP eCLIP17.11■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 STAT4Q14765 748 aa17.11■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 HES3Q5TGS1 186 aa17.11■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 ATP11CQ8NB49 1132 aa17.11■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 TMEM145Q8NBT3 493 aa17.11■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 ARRDC3Q96B67 414 aa17.11■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 PGAP3Q96FM1 320 aaPredicted RBP17.11■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 BBC3Q96PG8 261 aaPredicted RBP17.11■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 TBCBQ99426 244 aa17.11■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 RRN3Q9NYV6 651 aa17.11■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 ACACAQ13085 2346 aa17.1■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 DRGXA6NNA5 263 aa17.1■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 MAGEC1O60732 1142 aa17.1■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 RNGTTO60942 597 aaKnown RBP17.1■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 PRLRP16471 622 aa17.1■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 RRM1P23921 792 aa17.1■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 CHRNA3P32297 505 aa17.1■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 UBE2HP62256 183 aa17.1■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 KRT83P78385 493 aa17.1■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 MAN2A1Q16706 1144 aa17.1■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 PROX2Q3B8N5 592 aa17.1■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 MIIPQ5JXC2 388 aa17.1■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 TRNP1Q6NT89 227 aa17.1■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 LINGO4Q6UY18 593 aa17.1■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 TFAP2DQ7Z6R9 452 aa17.1■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 MLKLQ8NB16 471 aa17.1■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 CHST14Q8NCH0 376 aa17.1■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 KLK6Q92876 244 aa17.1■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 NXPE2Q96DL1 559 aa17.1■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 MYOCQ99972 504 aa17.1■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 C2orf49Q9BVC5 232 aaPredicted RBP17.1■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 CAAP1Q9H8G2 361 aa17.1■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 MPP6Q9NZW5 540 aa17.1■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 STAP1Q9ULZ2 295 aa17.1■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 IGLV3-10A0A075B6K4 115 aa17.09■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 A0A1W2PQU0 124 aa17.09■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 KPNA3O00505 521 aaPredicted RBP17.09■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 SLC31A1O15431 190 aa17.09■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 CYP11B1P15538 503 aa17.09■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 CKMT2P17540 419 aa17.09■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 GLDCP23378 1020 aa17.09■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 GABRB2P47870 512 aa17.09■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 DEUP1Q05D60 604 aa17.09■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 ZNF284Q2VY69 593 aa17.09■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 SLC25A52Q3SY17 297 aa17.09■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 C2CD6Q53TS8 623 aa17.09■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 C6orf118Q5T5N4 469 aa17.09■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 SETD3Q86TU7 594 aaPredicted RBP17.09■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 XYLT1Q86Y38 959 aa17.09■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 SLC25A45Q8N413 288 aa17.09■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 DCAF4L2Q8NA75 395 aa17.09■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 TMEM35BQ8NCS4 154 aa17.09■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 TMIEQ8NEW7 156 aa17.09■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 KLHDC7BQ96G42 594 aa17.09■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 C1orf74Q96LT6 269 aa17.09■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 DCBLD2Q96PD2 775 aa17.09■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 NDST4Q9H3R1 872 aa17.09■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 FZD3Q9NPG1 666 aa17.09■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 ZNF212Q9UDV6 495 aa17.09■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 FHOD1Q9Y613 1164 aa17.09■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 GOLGA4Q13439 2230 aaKnown RBP17.09■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 MYLKQ15746 1914 aa17.08■□□□□ 0.33
VPS9D1-AS1-201ENST00000562298 TRIM38O00635 465 aa17.08■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 TLX3O43711 291 aaPredicted RBP17.08■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 ZNF821O75541 412 aaPredicted RBP17.08■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 THEGLP0DJG4 465 aa17.08■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 ACP1P24666 158 aa17.08■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 FLT3P36888 993 aa17.08■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 SCNN1AP37088 669 aa17.08■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 BPIFB4P59827 614 aa17.08■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 KCNMA1Q12791 1236 aa17.08■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 ILKQ13418 452 aa17.08■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 RAPGEF1Q13905 1077 aa17.08■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 DRAP1Q14919 205 aaPredicted RBP17.08■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 VWA3BQ502W6 1294 aa17.08■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 HSP90AA4PQ58FG1 418 aa17.08■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 FAM102AQ5T9C2 384 aaPredicted RBP17.08■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 NEK5Q6P3R8 708 aa17.08■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 C22orf39Q6P5X5 142 aa17.08■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 BNIPLQ7Z465 357 aa17.08■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 OR7D4Q8NG98 312 aa17.08■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 GRIN3AQ8TCU5 1115 aa17.08■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 C18orf8Q96DM3 657 aa17.08■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 CCDC114Q96M63 670 aa17.08■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 TUBGCP2Q9BSJ2 902 aa17.08■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 TNKS2Q9H2K2 1166 aa17.08■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 UCKL1Q9NWZ5 548 aa17.08■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 ZFR2Q9UPR6 939 aaKnown RBP17.08■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 FARP1Q9Y4F1 1045 aaPredicted RBP17.08■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 KALRNO60229 2985 aa17.08■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 SIGLEC6O43699 453 aa17.07■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 F9P00740 461 aa17.07■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 PRNPP04156 253 aa17.07■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 PRKCSHP14314 528 aaPredicted RBP17.07■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 OR1E1P30953 314 aa17.07■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 CLCN6P51797 869 aa17.07■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 INSM1Q01101 510 aaPredicted RBP17.07■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 SEMG2Q02383 582 aa17.07■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 RTP5Q14D33 572 aa17.07■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 TPD52L1Q16890 204 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms