RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 RNASEH2AO75792 299 aaKnown RBP14.21□□□□□ -0.14
VPS9D1-202ENST00000561976 VAPBO95292 243 aa14.21□□□□□ -0.14
VPS9D1-202ENST00000561976 JUNP05412 331 aaKnown RBP14.21□□□□□ -0.14
VPS9D1-202ENST00000561976 RPS12P25398 132 aaKnown RBP14.21□□□□□ -0.14
VPS9D1-202ENST00000561976 COG7P83436 770 aa14.21□□□□□ -0.14
VPS9D1-202ENST00000561976 GRM3Q14832 879 aa14.21□□□□□ -0.14
VPS9D1-202ENST00000561976 MYBPC3Q14896 1274 aa14.21□□□□□ -0.14
VPS9D1-202ENST00000561976 ANO4Q32M45 955 aa14.21□□□□□ -0.14
VPS9D1-202ENST00000561976 SLC25A52Q3SY17 297 aa14.21□□□□□ -0.14
VPS9D1-202ENST00000561976 GLRA4Q5JXX5 417 aa14.21□□□□□ -0.14
VPS9D1-202ENST00000561976 ARHGAP17Q68EM7 881 aa14.21□□□□□ -0.14
VPS9D1-202ENST00000561976 NT5DC4Q86YG4 428 aa14.21□□□□□ -0.14
VPS9D1-202ENST00000561976 ATP6V1E2Q96A05 226 aa14.21□□□□□ -0.14
VPS9D1-202ENST00000561976 ZBTB26Q9HCK0 441 aa14.21□□□□□ -0.14
VPS9D1-202ENST00000561976 RHBDL2Q9NX52 303 aa14.21□□□□□ -0.14
VPS9D1-202ENST00000561976 ERAP1Q9NZ08 941 aa14.21□□□□□ -0.14
VPS9D1-202ENST00000561976 VTI1BQ9UEU0 232 aa14.21□□□□□ -0.14
VPS9D1-202ENST00000561976 SLC22A2O15244 555 aa14.2□□□□□ -0.14
VPS9D1-202ENST00000561976 CABYRO75952 493 aa14.2□□□□□ -0.14
VPS9D1-202ENST00000561976 PTPN3P26045 913 aa14.2□□□□□ -0.14
VPS9D1-202ENST00000561976 PCSK6P29122 969 aa14.2□□□□□ -0.14
VPS9D1-202ENST00000561976 ACADSBP45954 432 aa14.2□□□□□ -0.14
VPS9D1-202ENST00000561976 CSE1LP55060 971 aaKnown RBP14.2□□□□□ -0.14
VPS9D1-202ENST00000561976 IL23RQ5VWK5 629 aa14.2□□□□□ -0.14
VPS9D1-202ENST00000561976 PTAR1Q7Z6K3 402 aaPredicted RBP14.2□□□□□ -0.14
VPS9D1-202ENST00000561976 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.2□□□□□ -0.14
VPS9D1-202ENST00000561976 KCTD4Q8WVF5 259 aa14.2□□□□□ -0.14
VPS9D1-202ENST00000561976 CCT7Q99832 543 aa14.2□□□□□ -0.14
VPS9D1-202ENST00000561976 PDGFDQ9GZP0 370 aaPredicted RBP14.2□□□□□ -0.14
VPS9D1-202ENST00000561976 TUBGCP4Q9UGJ1 667 aa14.2□□□□□ -0.14
VPS9D1-202ENST00000561976 BTBD19C9JJ37 291 aa14.2□□□□□ -0.14
VPS9D1-202ENST00000561976 SLCO1B7G3V0H7 640 aa14.2□□□□□ -0.14
VPS9D1-202ENST00000561976 M0QYT0 321 aa14.2□□□□□ -0.14
VPS9D1-202ENST00000561976 DDHD2O94830 711 aa14.2□□□□□ -0.14
VPS9D1-202ENST00000561976 ADSLP30566 484 aaPredicted RBP14.2□□□□□ -0.14
VPS9D1-202ENST00000561976 HK2P52789 917 aa14.2□□□□□ -0.14
VPS9D1-202ENST00000561976 APOFQ13790 326 aa14.2□□□□□ -0.14
VPS9D1-202ENST00000561976 UNC93AQ86WB7 457 aa14.2□□□□□ -0.14
VPS9D1-202ENST00000561976 PCDH20Q8N6Y1 951 aaKnown RBP14.2□□□□□ -0.14
VPS9D1-202ENST00000561976 RDH11Q8TC12 318 aa14.2□□□□□ -0.14
VPS9D1-202ENST00000561976 SLC2A14Q8TDB8 520 aa14.2□□□□□ -0.14
VPS9D1-202ENST00000561976 APBA2Q99767 749 aa14.2□□□□□ -0.14
VPS9D1-202ENST00000561976 FIS1Q9Y3D6 152 aa14.2□□□□□ -0.14
VPS9D1-202ENST00000561976 COPG1Q9Y678 874 aaKnown RBP14.2□□□□□ -0.14
VPS9D1-202ENST00000561976 SCN1AP35498 2009 aa14.2□□□□□ -0.14
VPS9D1-202ENST00000561976 A0A1B0GTW7 788 aa14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 TRIM38O00635 465 aa14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 SOCS7O14512 581 aa14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 ZBTB24O43167 697 aaPredicted RBP14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 TSPAN1O60635 241 aa14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 TADA2AO75478 443 aa14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 TRMUO75648 421 aaKnown RBP14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 CSPG5O95196 566 aa14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 CDK4P11802 303 aa14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 LMO2P25791 158 aa14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 SCNN1AP37088 669 aa14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 POU5F1BQ06416 359 aa14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 ADIGQ0VDE8 80 aa14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 HERC3Q15034 1050 aa14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 ADRM1Q16186 407 aa14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 KIZQ2M2Z5 673 aa14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 TMEM102Q8N9M5 508 aaPredicted RBP14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 TSPAN14Q8NG11 270 aa14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 C18orf25Q96B23 403 aaPredicted RBP14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 ZMAT2Q96NC0 199 aaKnown RBP14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 HAUS8Q9BT25 410 aa14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 IL22Q9GZX6 179 aa14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 TRPV6Q9H1D0 765 aa14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 TIMMDC1Q9NPL8 285 aa14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 SNTG2Q9NY99 539 aa14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 UBP1Q9NZI7 540 aa14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 GINS2Q9Y248 185 aa14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 ARHGEF37A1IGU5 675 aa14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 ACOT8O14734 319 aa14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 PTPN1P18031 435 aaKnown RBP14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 NELFEP18615 380 aaKnown RBP14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 FGFR3P22607 806 aa14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 SLC5A2P31639 672 aa14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 GNL1P36915 607 aaPredicted RBP14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 CLCN2P51788 898 aa14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 PAFAH1B3Q15102 231 aaKnown RBP14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 MGAT5BQ3V5L5 792 aa14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 ZNF484Q5JVG2 852 aa14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 GADL1Q6ZQY3 521 aa14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 GK5Q6ZS86 529 aa14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 CNTD1Q8N815 330 aa14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 UNKQ9C0B0 810 aaKnown RBP14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 ZNF385DQ9H6B1 395 aa14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 PRDM16Q9HAZ2 1276 aa14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 CASS4Q9NQ75 786 aa14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 SETD4Q9NVD3 440 aa14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 ANKRD6Q9Y2G4 727 aa14.19□□□□□ -0.14
VPS9D1-202ENST00000561976 TMEM233B4DJY2 109 aa14.18□□□□□ -0.14
VPS9D1-202ENST00000561976 XPO1O14980 1071 aaKnown RBP14.18□□□□□ -0.14
VPS9D1-202ENST00000561976 NMBRP28336 390 aa14.18□□□□□ -0.14
VPS9D1-202ENST00000561976 PRKAA2P54646 552 aa14.18□□□□□ -0.14
VPS9D1-202ENST00000561976 PDZD4Q76G19 769 aaPredicted RBP14.18□□□□□ -0.14
VPS9D1-202ENST00000561976 FSTL5Q8N475 847 aaPredicted RBP14.18□□□□□ -0.14
VPS9D1-202ENST00000561976 ABTB1Q969K4 478 aaPredicted RBP14.18□□□□□ -0.14
VPS9D1-202ENST00000561976 SNX25Q9H3E2 840 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms