RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 COQ4Q9Y3A0 265 aa18.29■□□□□ 0.52
TSPAN3-208ENST00000560514 KIF26BQ2KJY2 2108 aa18.28■□□□□ 0.52
TSPAN3-208ENST00000560514 LY6G6EA0A0G2JKS1 128 aa18.28■□□□□ 0.52
TSPAN3-208ENST00000560514 CDRT15L2A8MXV6 281 aa18.28■□□□□ 0.52
TSPAN3-208ENST00000560514 TCEA3O75764 348 aa18.28■□□□□ 0.52
TSPAN3-208ENST00000560514 GJB6O95452 261 aa18.28■□□□□ 0.52
TSPAN3-208ENST00000560514 BRD2P25440 801 aaKnown RBP18.28■□□□□ 0.52
TSPAN3-208ENST00000560514 MCCD1P59942 119 aaPredicted RBP18.28■□□□□ 0.52
TSPAN3-208ENST00000560514 DNM1Q05193 864 aaKnown RBP18.28■□□□□ 0.52
TSPAN3-208ENST00000560514 CLN3Q13286 438 aa18.28■□□□□ 0.52
TSPAN3-208ENST00000560514 NR0B2Q15466 257 aa18.28■□□□□ 0.52
TSPAN3-208ENST00000560514 ARL13BQ3SXY8 428 aa18.28■□□□□ 0.52
TSPAN3-208ENST00000560514 ZCWPW2Q504Y3 356 aa18.28■□□□□ 0.52
TSPAN3-208ENST00000560514 OR6B2Q6IFH4 312 aa18.28■□□□□ 0.52
TSPAN3-208ENST00000560514 GUSBP11Q6P575 273 aa18.28■□□□□ 0.52
TSPAN3-208ENST00000560514 GCNT7Q6ZNI0 430 aa18.28■□□□□ 0.52
TSPAN3-208ENST00000560514 USP53Q70EK8 1073 aa18.28■□□□□ 0.52
TSPAN3-208ENST00000560514 ABI3BPQ7Z7G0 1075 aa18.28■□□□□ 0.52
TSPAN3-208ENST00000560514 SLC22A18ASQ8N1D0 253 aa18.28■□□□□ 0.52
TSPAN3-208ENST00000560514 ZNF548Q8NEK5 533 aaPredicted RBP18.28■□□□□ 0.52
TSPAN3-208ENST00000560514 GLMNQ92990 594 aa18.28■□□□□ 0.52
TSPAN3-208ENST00000560514 RPRD1AQ96P16 312 aaPredicted RBP18.28■□□□□ 0.52
TSPAN3-208ENST00000560514 NOX5Q96PH1 765 aa18.28■□□□□ 0.52
TSPAN3-208ENST00000560514 IL12RB2Q99665 862 aa18.28■□□□□ 0.52
TSPAN3-208ENST00000560514 SYNDIG1Q9H7V2 258 aa18.28■□□□□ 0.52
TSPAN3-208ENST00000560514 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.28■□□□□ 0.52
TSPAN3-208ENST00000560514 CSNK1G3Q9Y6M4 447 aa18.28■□□□□ 0.52
TSPAN3-208ENST00000560514 U3KQA8 63 aa18.28■□□□□ 0.52
TSPAN3-208ENST00000560514 TRPM6Q9BX84 2022 aa18.28■□□□□ 0.52
TSPAN3-208ENST00000560514 KCNU1A8MYU2 1149 aa18.27■□□□□ 0.52
TSPAN3-208ENST00000560514 TRUB2O95900 331 aaKnown RBP18.27■□□□□ 0.52
TSPAN3-208ENST00000560514 SLC2A3P11169 496 aa18.27■□□□□ 0.52
TSPAN3-208ENST00000560514 CHRNA3P32297 505 aa18.27■□□□□ 0.52
TSPAN3-208ENST00000560514 SYKP43405 635 aa18.27■□□□□ 0.52
TSPAN3-208ENST00000560514 ACADSBP45954 432 aa18.27■□□□□ 0.52
TSPAN3-208ENST00000560514 RPIAP49247 311 aa18.27■□□□□ 0.52
TSPAN3-208ENST00000560514 SYPL2Q5VXT5 272 aa18.27■□□□□ 0.52
TSPAN3-208ENST00000560514 CXorf57Q6NSI4 855 aaKnown RBP18.27■□□□□ 0.52
TSPAN3-208ENST00000560514 CRTC1Q6UUV9 634 aa18.27■□□□□ 0.52
TSPAN3-208ENST00000560514 BEND5Q7L4P6 421 aa18.27■□□□□ 0.52
TSPAN3-208ENST00000560514 PARGQ86W56 976 aa18.27■□□□□ 0.52
TSPAN3-208ENST00000560514 SH2D3CQ8N5H7 860 aa18.27■□□□□ 0.52
TSPAN3-208ENST00000560514 WDR48Q8TAF3 677 aa18.27■□□□□ 0.52
TSPAN3-208ENST00000560514 NT5C1BQ96P26 610 aa18.27■□□□□ 0.52
TSPAN3-208ENST00000560514 FEM1AQ9BSK4 669 aa18.27■□□□□ 0.52
TSPAN3-208ENST00000560514 SALL4Q9UJQ4 1053 aa18.27■□□□□ 0.52
TSPAN3-208ENST00000560514 HS3ST3A1Q9Y663 406 aa18.27■□□□□ 0.52
TSPAN3-208ENST00000560514 RP1P56715 2156 aa18.26■□□□□ 0.51
TSPAN3-208ENST00000560514 CCDC187A0A096LP49 1063 aa18.26■□□□□ 0.51
TSPAN3-208ENST00000560514 A0A1W2PNU3 283 aaPredicted RBP18.26■□□□□ 0.51
TSPAN3-208ENST00000560514 EME2A4GXA9 379 aaPredicted RBP18.26■□□□□ 0.51
TSPAN3-208ENST00000560514 AQP9O43315 295 aa18.26■□□□□ 0.51
TSPAN3-208ENST00000560514 PRNPP04156 253 aa18.26■□□□□ 0.51
TSPAN3-208ENST00000560514 ITGA2BP08514 1039 aa18.26■□□□□ 0.51
TSPAN3-208ENST00000560514 PRR29P0C7W0 189 aa18.26■□□□□ 0.51
TSPAN3-208ENST00000560514 SFTPCP11686 197 aa18.26■□□□□ 0.51
TSPAN3-208ENST00000560514 KRT83P78385 493 aa18.26■□□□□ 0.51
TSPAN3-208ENST00000560514 SRSF1Q07955 248 aaKnown RBP eCLIP18.26■□□□□ 0.51
TSPAN3-208ENST00000560514 DEFB133Q30KQ1 61 aa18.26■□□□□ 0.51
TSPAN3-208ENST00000560514 CLEC14AQ86T13 490 aa18.26■□□□□ 0.51
TSPAN3-208ENST00000560514 PPM1KQ8N3J5 372 aa18.26■□□□□ 0.51
TSPAN3-208ENST00000560514 UBR7Q8N806 425 aa18.26■□□□□ 0.51
TSPAN3-208ENST00000560514 EXD3Q8N9H8 876 aa18.26■□□□□ 0.51
TSPAN3-208ENST00000560514 ATP11CQ8NB49 1132 aa18.26■□□□□ 0.51
TSPAN3-208ENST00000560514 LMX1AQ8TE12 382 aa18.26■□□□□ 0.51
TSPAN3-208ENST00000560514 PRR11Q96HE9 360 aaPredicted RBP18.26■□□□□ 0.51
TSPAN3-208ENST00000560514 PPP1R16AQ96I34 528 aa18.26■□□□□ 0.51
TSPAN3-208ENST00000560514 TSG101Q99816 390 aa18.26■□□□□ 0.51
TSPAN3-208ENST00000560514 SRRTQ9BXP5 876 aaKnown RBP18.26■□□□□ 0.51
TSPAN3-208ENST00000560514 MUC3BQ9H195 1237 aa18.26■□□□□ 0.51
TSPAN3-208ENST00000560514 CAAP1Q9H8G2 361 aa18.26■□□□□ 0.51
TSPAN3-208ENST00000560514 FAM204AQ9H8W3 233 aa18.26■□□□□ 0.51
TSPAN3-208ENST00000560514 POPDC2Q9HBU9 364 aa18.26■□□□□ 0.51
TSPAN3-208ENST00000560514 ATXN7L1Q9ULK2 861 aaPredicted RBP18.26■□□□□ 0.51
TSPAN3-208ENST00000560514 PTPN13Q12923 2485 aa18.26■□□□□ 0.51
TSPAN3-208ENST00000560514 CSF2P04141 144 aa18.25■□□□□ 0.51
TSPAN3-208ENST00000560514 NTRK1P04629 796 aa18.25■□□□□ 0.51
TSPAN3-208ENST00000560514 NME1P15531 152 aaKnown RBP18.25■□□□□ 0.51
TSPAN3-208ENST00000560514 RECQLP46063 649 aaPredicted RBP18.25■□□□□ 0.51
TSPAN3-208ENST00000560514 RABIFP47224 123 aa18.25■□□□□ 0.51
TSPAN3-208ENST00000560514 INHBCP55103 352 aa18.25■□□□□ 0.51
TSPAN3-208ENST00000560514 PKP1Q13835 747 aa18.25■□□□□ 0.51
TSPAN3-208ENST00000560514 SPIDRQ14159 915 aa18.25■□□□□ 0.51
TSPAN3-208ENST00000560514 COLEC12Q5KU26 742 aa18.25■□□□□ 0.51
TSPAN3-208ENST00000560514 KYAT3Q6YP21 454 aaKnown RBP18.25■□□□□ 0.51
TSPAN3-208ENST00000560514 ZNF574Q6ZN55 896 aaPredicted RBP18.25■□□□□ 0.51
TSPAN3-208ENST00000560514 ERN2Q76MJ5 926 aaKnown RBP18.25■□□□□ 0.51
TSPAN3-208ENST00000560514 TMIEQ8NEW7 156 aa18.25■□□□□ 0.51
TSPAN3-208ENST00000560514 NAT6Q93015 286 aa18.25■□□□□ 0.51
TSPAN3-208ENST00000560514 MED15Q96RN5 788 aa18.25■□□□□ 0.51
TSPAN3-208ENST00000560514 ZFR2Q9UPR6 939 aaKnown RBP18.25■□□□□ 0.51
TSPAN3-208ENST00000560514 SYNJ2BP-COX16A0A087WUM0 186 aa18.24■□□□□ 0.51
TSPAN3-208ENST00000560514 SPTY2D1-AS1A0A0U1RR47 76 aa18.24■□□□□ 0.51
TSPAN3-208ENST00000560514 FAM237AA0A1B0GTK4 181 aa18.24■□□□□ 0.51
TSPAN3-208ENST00000560514 TPP1O14773 563 aa18.24■□□□□ 0.51
TSPAN3-208ENST00000560514 MUSKO15146 869 aa18.24■□□□□ 0.51
TSPAN3-208ENST00000560514 SLC16A3O15427 465 aaKnown RBP18.24■□□□□ 0.51
TSPAN3-208ENST00000560514 CTSLP07711 333 aa18.24■□□□□ 0.51
TSPAN3-208ENST00000560514 JUNDP17535 347 aa18.24■□□□□ 0.51
TSPAN3-208ENST00000560514 CCR1P32246 355 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms