RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 BTBD10Q9BSF8 475 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 MLPHQ9BV36 600 aaPredicted RBP9.89□□□□□ -0.83
RTF1-206ENST00000560447 SLC13A1Q9BZW2 595 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 EBF2Q9HAK2 575 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 UGT1A7Q9HAW7 530 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 UGT1A10Q9HAW8 530 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 UGT1A8Q9HAW9 530 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 GLOD4Q9HC38 313 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 TMLHEQ9NVH6 421 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 TMEM161AQ9NX61 479 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 CLIC5Q9NZA1 410 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 NOP53Q9NZM5 478 aaKnown RBP9.89□□□□□ -0.83
RTF1-206ENST00000560447 GGT7Q9UJ14 662 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 HAO1Q9UJM8 370 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 DCTN4Q9UJW0 460 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 HBS1LQ9Y450 684 aaKnown RBP9.89□□□□□ -0.83
RTF1-206ENST00000560447 PCDHB5Q9Y5E4 795 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 GREB1Q4ZG55 1949 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 MIA3Q5JRA6 1907 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 NYNRINQ9P2P1 1898 aaKnown RBP9.89□□□□□ -0.83
RTF1-206ENST00000560447 TMEM88BA6NKF7 163 aa9.88□□□□□ -0.83
RTF1-206ENST00000560447 HOXA2O43364 376 aa9.88□□□□□ -0.83
RTF1-206ENST00000560447 PAGE1O75459 146 aa9.88□□□□□ -0.83
RTF1-206ENST00000560447 KLHL2O95198 593 aa9.88□□□□□ -0.83
RTF1-206ENST00000560447 GSRP00390 522 aa9.88□□□□□ -0.83
RTF1-206ENST00000560447 JCHAINP01591 159 aa9.88□□□□□ -0.83
RTF1-206ENST00000560447 SERPINA6P08185 405 aa9.88□□□□□ -0.83
RTF1-206ENST00000560447 MYL2P10916 166 aa9.88□□□□□ -0.83
RTF1-206ENST00000560447 FGF3P11487 239 aaPredicted RBP9.88□□□□□ -0.83
RTF1-206ENST00000560447 CKBP12277 381 aa9.88□□□□□ -0.83
RTF1-206ENST00000560447 RHOQP17081 205 aa9.88□□□□□ -0.83
RTF1-206ENST00000560447 PAMP19021 973 aa9.88□□□□□ -0.83
RTF1-206ENST00000560447 IGFBP6P24592 240 aaPredicted RBP9.88□□□□□ -0.83
RTF1-206ENST00000560447 TARSP26639 723 aaKnown RBP9.88□□□□□ -0.83
RTF1-206ENST00000560447 CCND3P30281 292 aaPredicted RBP9.88□□□□□ -0.83
RTF1-206ENST00000560447 HARS2P49590 506 aaKnown RBP9.88□□□□□ -0.83
RTF1-206ENST00000560447 CSRP3P50461 194 aa9.88□□□□□ -0.83
RTF1-206ENST00000560447 KPNA2P52292 529 aaKnown RBP9.88□□□□□ -0.83
RTF1-206ENST00000560447 KPNA1P52294 538 aaPredicted RBP9.88□□□□□ -0.83
RTF1-206ENST00000560447 MLLT6P55198 1093 aaPredicted RBP9.88□□□□□ -0.83
RTF1-206ENST00000560447 PRMT2P55345 433 aa9.88□□□□□ -0.83
RTF1-206ENST00000560447 SP3Q02447 781 aa9.88□□□□□ -0.83
RTF1-206ENST00000560447 RING1Q06587 406 aa9.88□□□□□ -0.83
RTF1-206ENST00000560447 ASPHQ12797 758 aa9.88□□□□□ -0.83
RTF1-206ENST00000560447 SF3A3Q12874 501 aaKnown RBP eCLIP9.88□□□□□ -0.83
RTF1-206ENST00000560447 LAMB3Q13751 1172 aa9.88□□□□□ -0.83
RTF1-206ENST00000560447 HNRNPDQ14103 355 aaKnown RBP9.88□□□□□ -0.83
RTF1-206ENST00000560447 MRPL58Q14197 206 aaKnown RBP9.88□□□□□ -0.83
RTF1-206ENST00000560447 BTG3Q14201 252 aaPredicted RBP9.88□□□□□ -0.83
RTF1-206ENST00000560447 DNAL1Q4LDG9 190 aa9.88□□□□□ -0.83
RTF1-206ENST00000560447 N4BP2L1Q5TBK1 243 aaPredicted RBP9.88□□□□□ -0.83
RTF1-206ENST00000560447 TRAF7Q6Q0C0 670 aa9.88□□□□□ -0.83
RTF1-206ENST00000560447 KIAA0408Q6ZU52 694 aa9.88□□□□□ -0.83
RTF1-206ENST00000560447 GALNT7Q86SF2 657 aa9.88□□□□□ -0.83
RTF1-206ENST00000560447 SCD5Q86SK9 330 aa9.88□□□□□ -0.83
RTF1-206ENST00000560447 LRRTM3Q86VH5 581 aa9.88□□□□□ -0.83
RTF1-206ENST00000560447 KCNMB4Q86W47 210 aa9.88□□□□□ -0.83
RTF1-206ENST00000560447 LMNTD2Q8IXW0 634 aa9.88□□□□□ -0.83
RTF1-206ENST00000560447 DCLK2Q8N568 766 aa9.88□□□□□ -0.83
RTF1-206ENST00000560447 ATP6V0D2Q8N8Y2 350 aa9.88□□□□□ -0.83
RTF1-206ENST00000560447 PIWIL2Q8TC59 973 aaKnown RBP9.88□□□□□ -0.83
RTF1-206ENST00000560447 LRRN4Q8WUT4 740 aa9.88□□□□□ -0.83
RTF1-206ENST00000560447 FAM193BQ96PV7 902 aaPredicted RBP9.88□□□□□ -0.83
RTF1-206ENST00000560447 RANBP9Q96S59 729 aa9.88□□□□□ -0.83
RTF1-206ENST00000560447 GPR22Q99680 433 aa9.88□□□□□ -0.83
RTF1-206ENST00000560447 TBC1D10AQ9BXI6 508 aa9.88□□□□□ -0.83
RTF1-206ENST00000560447 C1orf21Q9H246 121 aa9.88□□□□□ -0.83
RTF1-206ENST00000560447 RHOJQ9H4E5 214 aa9.88□□□□□ -0.83
RTF1-206ENST00000560447 ARNT2Q9HBZ2 717 aa9.88□□□□□ -0.83
RTF1-206ENST00000560447 SNX15Q9NRS6 342 aa9.88□□□□□ -0.83
RTF1-206ENST00000560447 VPS45Q9NRW7 570 aa9.88□□□□□ -0.83
RTF1-206ENST00000560447 OSER1Q9NX31 292 aa9.88□□□□□ -0.83
RTF1-206ENST00000560447 DNAJC28Q9NX36 388 aa9.88□□□□□ -0.83
RTF1-206ENST00000560447 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.88□□□□□ -0.83
RTF1-206ENST00000560447 SRRDQ9UH36 339 aa9.88□□□□□ -0.83
RTF1-206ENST00000560447 EMCNQ9ULC0 261 aa9.88□□□□□ -0.83
RTF1-206ENST00000560447 APOBEC2Q9Y235 224 aaKnown RBP9.88□□□□□ -0.83
RTF1-206ENST00000560447 INPP5FQ9Y2H2 1132 aa9.88□□□□□ -0.83
RTF1-206ENST00000560447 IGLV3-10A0A075B6K4 115 aa9.87□□□□□ -0.83
RTF1-206ENST00000560447 E9PAM4 449 aa9.87□□□□□ -0.83
RTF1-206ENST00000560447 FCHO1O14526 889 aa9.87□□□□□ -0.83
RTF1-206ENST00000560447 MAFKO60675 156 aa9.87□□□□□ -0.83
RTF1-206ENST00000560447 MAGEC1O60732 1142 aa9.87□□□□□ -0.83
RTF1-206ENST00000560447 PAPSS2O95340 614 aaPredicted RBP9.87□□□□□ -0.83
RTF1-206ENST00000560447 ESRRAP11474 423 aaPredicted RBP9.87□□□□□ -0.83
RTF1-206ENST00000560447 SERPINB3P29508 390 aa9.87□□□□□ -0.83
RTF1-206ENST00000560447 RENBPP51606 427 aa9.87□□□□□ -0.83
RTF1-206ENST00000560447 OVGP1Q12889 678 aa9.87□□□□□ -0.83
RTF1-206ENST00000560447 PCLAFQ15004 111 aa9.87□□□□□ -0.83
RTF1-206ENST00000560447 SLC14A2Q15849 920 aa9.87□□□□□ -0.83
RTF1-206ENST00000560447 KIAA0930Q6ICG6 404 aaPredicted RBP9.87□□□□□ -0.83
RTF1-206ENST00000560447 ZNF280DQ6N043 979 aa9.87□□□□□ -0.83
RTF1-206ENST00000560447 RWDD4Q6NW29 188 aaKnown RBP9.87□□□□□ -0.83
RTF1-206ENST00000560447 PKN3Q6P5Z2 889 aa9.87□□□□□ -0.83
RTF1-206ENST00000560447 STRA8Q7Z7C7 330 aa9.87□□□□□ -0.83
RTF1-206ENST00000560447 TMPRSS6Q8IU80 811 aa9.87□□□□□ -0.83
RTF1-206ENST00000560447 ARID3BQ8IVW6 561 aaPredicted RBP9.87□□□□□ -0.83
RTF1-206ENST00000560447 KIRREL3Q8IZU9 778 aa9.87□□□□□ -0.83
RTF1-206ENST00000560447 CCDC33Q8N5R6 958 aa9.87□□□□□ -0.83
RTF1-206ENST00000560447 CNTD1Q8N815 330 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms