RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 ATP11AP98196 1134 aa14.41□□□□□ -0.1
TPM1-223ENST00000560445 FMO1Q01740 532 aa14.41□□□□□ -0.1
TPM1-223ENST00000560445 BNC1Q01954 994 aa14.41□□□□□ -0.1
TPM1-223ENST00000560445 STAT4Q14765 748 aa14.41□□□□□ -0.1
TPM1-223ENST00000560445 FILIP1LQ4L180 1135 aa14.41□□□□□ -0.1
TPM1-223ENST00000560445 ALFQ53S48 1182 aa14.41□□□□□ -0.1
TPM1-223ENST00000560445 BNIPLQ7Z465 357 aa14.41□□□□□ -0.1
TPM1-223ENST00000560445 TFAP2DQ7Z6R9 452 aa14.41□□□□□ -0.1
TPM1-223ENST00000560445 C14orf80Q86SX3 495 aa14.41□□□□□ -0.1
TPM1-223ENST00000560445 FAM131BQ86XD5 332 aa14.41□□□□□ -0.1
TPM1-223ENST00000560445 PHF13Q86YI8 300 aaPredicted RBP14.41□□□□□ -0.1
TPM1-223ENST00000560445 SLC6A18Q96N87 628 aa14.41□□□□□ -0.1
TPM1-223ENST00000560445 C11orf70Q9BRQ4 267 aa14.41□□□□□ -0.1
TPM1-223ENST00000560445 SPON2Q9BUD6 331 aa14.41□□□□□ -0.1
TPM1-223ENST00000560445 OSBPL2Q9H1P3 480 aa14.41□□□□□ -0.1
TPM1-223ENST00000560445 IL21RQ9HBE5 538 aa14.41□□□□□ -0.1
TPM1-223ENST00000560445 SEPT11Q9NVA2 429 aaKnown RBP14.41□□□□□ -0.1
TPM1-223ENST00000560445 FTSJ1Q9UET6 329 aa14.41□□□□□ -0.1
TPM1-223ENST00000560445 MYO6Q9UM54 1294 aa14.41□□□□□ -0.1
TPM1-223ENST00000560445 SIK3Q9Y2K2 1263 aa14.41□□□□□ -0.1
TPM1-223ENST00000560445 A0A1B0GTQ1 180 aa14.4□□□□□ -0.1
TPM1-223ENST00000560445 LRRC10BA6NIK2 292 aa14.4□□□□□ -0.1
TPM1-223ENST00000560445 CBX4O00257 560 aa14.4□□□□□ -0.1
TPM1-223ENST00000560445 KPNA3O00505 521 aaPredicted RBP14.4□□□□□ -0.1
TPM1-223ENST00000560445 BNIP3LO60238 219 aa14.4□□□□□ -0.1
TPM1-223ENST00000560445 CNTN5O94779 1100 aa14.4□□□□□ -0.1
TPM1-223ENST00000560445 ITGAVP06756 1048 aa14.4□□□□□ -0.1
TPM1-223ENST00000560445 RHOQP17081 205 aa14.4□□□□□ -0.1
TPM1-223ENST00000560445 CHRNA3P32297 505 aa14.4□□□□□ -0.1
TPM1-223ENST00000560445 GGCXP38435 758 aa14.4□□□□□ -0.1
TPM1-223ENST00000560445 SERPINH1P50454 418 aaKnown RBP14.4□□□□□ -0.1
TPM1-223ENST00000560445 GNA12Q03113 381 aa14.4□□□□□ -0.1
TPM1-223ENST00000560445 POLD3Q15054 466 aaPredicted RBP14.4□□□□□ -0.1
TPM1-223ENST00000560445 HS1BP3Q53T59 392 aa14.4□□□□□ -0.1
TPM1-223ENST00000560445 EFHC2Q5JST6 749 aa14.4□□□□□ -0.1
TPM1-223ENST00000560445 DNAJC24Q6P3W2 148 aa14.4□□□□□ -0.1
TPM1-223ENST00000560445 C22orf39Q6P5X5 142 aa14.4□□□□□ -0.1
TPM1-223ENST00000560445 PLPP6Q8IY26 295 aa14.4□□□□□ -0.1
TPM1-223ENST00000560445 ZNF683Q8IZ20 524 aa14.4□□□□□ -0.1
TPM1-223ENST00000560445 C3orf20Q8ND61 904 aa14.4□□□□□ -0.1
TPM1-223ENST00000560445 BAHD1Q8TBE0 780 aaPredicted RBP14.4□□□□□ -0.1
TPM1-223ENST00000560445 SLC20A1Q8WUM9 679 aa14.4□□□□□ -0.1
TPM1-223ENST00000560445 RXFP2Q8WXD0 754 aa14.4□□□□□ -0.1
TPM1-223ENST00000560445 ZCCHC14Q8WYQ9 949 aaKnown RBP14.4□□□□□ -0.1
TPM1-223ENST00000560445 NTAN1Q96AB6 310 aa14.4□□□□□ -0.1
TPM1-223ENST00000560445 LRIG1Q96JA1 1093 aa14.4□□□□□ -0.1
TPM1-223ENST00000560445 CAMK1GQ96NX5 476 aa14.4□□□□□ -0.1
TPM1-223ENST00000560445 ORAI3Q9BRQ5 295 aa14.4□□□□□ -0.1
TPM1-223ENST00000560445 MPP6Q9NZW5 540 aa14.4□□□□□ -0.1
TPM1-223ENST00000560445 OR12D3Q9UGF7 316 aa14.4□□□□□ -0.1
TPM1-223ENST00000560445 IL36AQ9UHA7 158 aa14.4□□□□□ -0.1
TPM1-223ENST00000560445 DOCK4Q8N1I0 1966 aa14.4□□□□□ -0.1
TPM1-223ENST00000560445 C2CD4BA6NLJ0 364 aa14.39□□□□□ -0.11
TPM1-223ENST00000560445 C1QTNF9BB2RNN3 333 aa14.39□□□□□ -0.11
TPM1-223ENST00000560445 H0Y8X5 98 aa14.39□□□□□ -0.11
TPM1-223ENST00000560445 TLR4O00206 839 aa14.39□□□□□ -0.11
TPM1-223ENST00000560445 C1QTNF9P0C862 333 aa14.39□□□□□ -0.11
TPM1-223ENST00000560445 VAV1P15498 845 aa14.39□□□□□ -0.11
TPM1-223ENST00000560445 TFE3P19532 575 aaPredicted RBP14.39□□□□□ -0.11
TPM1-223ENST00000560445 GPD1P21695 349 aa14.39□□□□□ -0.11
TPM1-223ENST00000560445 AKT2P31751 481 aa14.39□□□□□ -0.11
TPM1-223ENST00000560445 HTR7P34969 479 aa14.39□□□□□ -0.11
TPM1-223ENST00000560445 ADRA1BP35368 520 aa14.39□□□□□ -0.11
TPM1-223ENST00000560445 TPM4P67936 248 aa14.39□□□□□ -0.11
TPM1-223ENST00000560445 CNTN1Q12860 1018 aa14.39□□□□□ -0.11
TPM1-223ENST00000560445 CDO1Q16878 200 aa14.39□□□□□ -0.11
TPM1-223ENST00000560445 CLEC16AQ2KHT3 1053 aa14.39□□□□□ -0.11
TPM1-223ENST00000560445 AGBL4Q5VU57 503 aa14.39□□□□□ -0.11
TPM1-223ENST00000560445 RWDD4Q6NW29 188 aaKnown RBP14.39□□□□□ -0.11
TPM1-223ENST00000560445 CHCHD4Q8N4Q1 142 aa14.39□□□□□ -0.11
TPM1-223ENST00000560445 OR2A12Q8NGT7 310 aa14.39□□□□□ -0.11
TPM1-223ENST00000560445 CASKIN2Q8WXE0 1202 aa14.39□□□□□ -0.11
TPM1-223ENST00000560445 GATA6Q92908 595 aa14.39□□□□□ -0.11
TPM1-223ENST00000560445 ISG20Q96AZ6 181 aaKnown RBP14.39□□□□□ -0.11
TPM1-223ENST00000560445 TBC1D31Q96DN5 1066 aa14.39□□□□□ -0.11
TPM1-223ENST00000560445 ARHGEF26Q96DR7 871 aa14.39□□□□□ -0.11
TPM1-223ENST00000560445 HDAC8Q9BY41 377 aa14.39□□□□□ -0.11
TPM1-223ENST00000560445 MAGEH1Q9H213 219 aa14.39□□□□□ -0.11
TPM1-223ENST00000560445 EVA1BQ9NVM1 165 aa14.39□□□□□ -0.11
TPM1-223ENST00000560445 EIF3CLB5ME19 914 aaKnown RBP14.38□□□□□ -0.11
TPM1-223ENST00000560445 SNAP91O60641 907 aa14.38□□□□□ -0.11
TPM1-223ENST00000560445 RAMP2O60895 175 aa14.38□□□□□ -0.11
TPM1-223ENST00000560445 RTN2O75298 545 aa14.38□□□□□ -0.11
TPM1-223ENST00000560445 C1SP09871 688 aa14.38□□□□□ -0.11
TPM1-223ENST00000560445 UNGP13051 313 aaPredicted RBP14.38□□□□□ -0.11
TPM1-223ENST00000560445 SPINK2P20155 84 aa14.38□□□□□ -0.11
TPM1-223ENST00000560445 IRAK1P51617 712 aa14.38□□□□□ -0.11
TPM1-223ENST00000560445 NEK3P51956 506 aa14.38□□□□□ -0.11
TPM1-223ENST00000560445 NXPH1P58417 271 aa14.38□□□□□ -0.11
TPM1-223ENST00000560445 FAM193AP78312 1265 aa14.38□□□□□ -0.11
TPM1-223ENST00000560445 SCAPQ12770 1279 aa14.38□□□□□ -0.11
TPM1-223ENST00000560445 KIAA1161Q6NSJ0 714 aa14.38□□□□□ -0.11
TPM1-223ENST00000560445 DCUN1D2Q6PH85 259 aa14.38□□□□□ -0.11
TPM1-223ENST00000560445 ERN2Q76MJ5 926 aaKnown RBP14.38□□□□□ -0.11
TPM1-223ENST00000560445 SLFN11Q7Z7L1 901 aa14.38□□□□□ -0.11
TPM1-223ENST00000560445 DCP2Q8IU60 420 aaKnown RBP14.38□□□□□ -0.11
TPM1-223ENST00000560445 DRC7Q8IY82 874 aa14.38□□□□□ -0.11
TPM1-223ENST00000560445 EMC1Q8N766 993 aa14.38□□□□□ -0.11
TPM1-223ENST00000560445 OR52K2Q8NGK3 314 aa14.38□□□□□ -0.11
TPM1-223ENST00000560445 SLC30A5Q8TAD4 765 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms