RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 PITX1P78337 314 aaPredicted RBP17.04■□□□□ 0.32
HERC1-207ENST00000560316 CENPCQ03188 943 aa17.04■□□□□ 0.32
HERC1-207ENST00000560316 FZD2Q14332 565 aa17.04■□□□□ 0.32
HERC1-207ENST00000560316 EDRF1Q3B7T1 1238 aa17.04■□□□□ 0.32
HERC1-207ENST00000560316 ZCCHC8Q6NZY4 707 aaKnown RBP17.04■□□□□ 0.32
HERC1-207ENST00000560316 NEK5Q6P3R8 708 aa17.04■□□□□ 0.32
HERC1-207ENST00000560316 CLEC14AQ86T13 490 aa17.04■□□□□ 0.32
HERC1-207ENST00000560316 ARL14Q8N4G2 192 aa17.04■□□□□ 0.32
HERC1-207ENST00000560316 CCDC47Q96A33 483 aaKnown RBP17.04■□□□□ 0.32
HERC1-207ENST00000560316 GRAMD1AQ96CP6 724 aa17.04■□□□□ 0.32
HERC1-207ENST00000560316 PRMT1Q99873 361 aaKnown RBP17.04■□□□□ 0.32
HERC1-207ENST00000560316 PCDHB4Q9Y5E5 795 aa17.04■□□□□ 0.32
HERC1-207ENST00000560316 TCAF2A6NFQ2 919 aa17.03■□□□□ 0.32
HERC1-207ENST00000560316 A6NNZ2 444 aa17.03■□□□□ 0.32
HERC1-207ENST00000560316 PCDH8O95206 1070 aa17.03■□□□□ 0.32
HERC1-207ENST00000560316 TBXAS1P24557 533 aaPredicted RBP17.03■□□□□ 0.32
HERC1-207ENST00000560316 IRAK1P51617 712 aa17.03■□□□□ 0.32
HERC1-207ENST00000560316 DEFB133Q30KQ1 61 aa17.03■□□□□ 0.32
HERC1-207ENST00000560316 PERM1Q5SV97 790 aa17.03■□□□□ 0.32
HERC1-207ENST00000560316 SMYD4Q8IYR2 804 aaPredicted RBP17.03■□□□□ 0.32
HERC1-207ENST00000560316 SH2D3CQ8N5H7 860 aa17.03■□□□□ 0.32
HERC1-207ENST00000560316 WDR36Q8NI36 951 aaKnown RBP17.03■□□□□ 0.32
HERC1-207ENST00000560316 BMFQ96LC9 184 aa17.03■□□□□ 0.32
HERC1-207ENST00000560316 FEM1AQ9BSK4 669 aa17.03■□□□□ 0.32
HERC1-207ENST00000560316 ST7Q9NRC1 585 aa17.03■□□□□ 0.32
HERC1-207ENST00000560316 USP25Q9UHP3 1055 aa17.03■□□□□ 0.32
HERC1-207ENST00000560316 KLF15Q9UIH9 416 aa17.03■□□□□ 0.32
HERC1-207ENST00000560316 EME2A4GXA9 379 aaPredicted RBP17.02■□□□□ 0.32
HERC1-207ENST00000560316 POM121BA6NF01 834 aa17.02■□□□□ 0.32
HERC1-207ENST00000560316 KCNU1A8MYU2 1149 aa17.02■□□□□ 0.32
HERC1-207ENST00000560316 MUSKO15146 869 aa17.02■□□□□ 0.32
HERC1-207ENST00000560316 CETN3O15182 167 aa17.02■□□□□ 0.32
HERC1-207ENST00000560316 TRUB2O95900 331 aaKnown RBP17.02■□□□□ 0.32
HERC1-207ENST00000560316 MT-CO1P00395 513 aa17.02■□□□□ 0.32
HERC1-207ENST00000560316 CSF2P04141 144 aa17.02■□□□□ 0.32
HERC1-207ENST00000560316 NME1P15531 152 aaKnown RBP17.02■□□□□ 0.32
HERC1-207ENST00000560316 CHRNA3P32297 505 aa17.02■□□□□ 0.32
HERC1-207ENST00000560316 DPYDQ12882 1025 aa17.02■□□□□ 0.32
HERC1-207ENST00000560316 SRSF6Q13247 344 aaKnown RBP17.02■□□□□ 0.32
HERC1-207ENST00000560316 RABGAP1LQ5R372 815 aa17.02■□□□□ 0.32
HERC1-207ENST00000560316 FBXL22Q6P050 247 aa17.02■□□□□ 0.32
HERC1-207ENST00000560316 ATG14Q6ZNE5 492 aa17.02■□□□□ 0.32
HERC1-207ENST00000560316 ATP6V0D2Q8N8Y2 350 aa17.02■□□□□ 0.32
HERC1-207ENST00000560316 EXTL1Q92935 676 aa17.02■□□□□ 0.32
HERC1-207ENST00000560316 KAT5Q92993 513 aa17.02■□□□□ 0.32
HERC1-207ENST00000560316 RNF34Q969K3 372 aa17.02■□□□□ 0.32
HERC1-207ENST00000560316 GPR27Q9NS67 375 aa17.02■□□□□ 0.32
HERC1-207ENST00000560316 STARD5Q9NSY2 213 aa17.02■□□□□ 0.32
HERC1-207ENST00000560316 VPS28Q9UK41 221 aa17.02■□□□□ 0.32
HERC1-207ENST00000560316 RCOR1Q9UKL0 485 aa17.02■□□□□ 0.32
HERC1-207ENST00000560316 ATXN7L1Q9ULK2 861 aaPredicted RBP17.02■□□□□ 0.32
HERC1-207ENST00000560316 RP1P56715 2156 aa17.02■□□□□ 0.31
HERC1-207ENST00000560316 DOPEY2Q9Y3R5 2298 aa17.01■□□□□ 0.31
HERC1-207ENST00000560316 AQP9O43315 295 aa17.01■□□□□ 0.31
HERC1-207ENST00000560316 F13A1P00488 732 aa17.01■□□□□ 0.31
HERC1-207ENST00000560316 IGLV3-25P01717 112 aa17.01■□□□□ 0.31
HERC1-207ENST00000560316 ZSCAN22P10073 491 aaPredicted RBP17.01■□□□□ 0.31
HERC1-207ENST00000560316 SRCP12931 536 aa17.01■□□□□ 0.31
HERC1-207ENST00000560316 PDX1P52945 283 aa17.01■□□□□ 0.31
HERC1-207ENST00000560316 OXCT1P55809 520 aa17.01■□□□□ 0.31
HERC1-207ENST00000560316 DNM1Q05193 864 aaKnown RBP17.01■□□□□ 0.31
HERC1-207ENST00000560316 FGL2Q14314 439 aa17.01■□□□□ 0.31
HERC1-207ENST00000560316 NR0B2Q15466 257 aa17.01■□□□□ 0.31
HERC1-207ENST00000560316 STILQ15468 1287 aa17.01■□□□□ 0.31
HERC1-207ENST00000560316 TMEM259Q4ZIN3 620 aa17.01■□□□□ 0.31
HERC1-207ENST00000560316 TTC39BQ5VTQ0 682 aaPredicted RBP17.01■□□□□ 0.31
HERC1-207ENST00000560316 DCP2Q8IU60 420 aaKnown RBP17.01■□□□□ 0.31
HERC1-207ENST00000560316 OR2A12Q8NGT7 310 aa17.01■□□□□ 0.31
HERC1-207ENST00000560316 TPCN2Q8NHX9 752 aa17.01■□□□□ 0.31
HERC1-207ENST00000560316 LMX1AQ8TE12 382 aa17.01■□□□□ 0.31
HERC1-207ENST00000560316 RPRD1AQ96P16 312 aaPredicted RBP17.01■□□□□ 0.31
HERC1-207ENST00000560316 ARHGAP9Q9BRR9 750 aa17.01■□□□□ 0.31
HERC1-207ENST00000560316 SYNDIG1Q9H7V2 258 aa17.01■□□□□ 0.31
HERC1-207ENST00000560316 DYRK4Q9NR20 520 aa17.01■□□□□ 0.31
HERC1-207ENST00000560316 NCKIPSDQ9NZQ3 722 aa17.01■□□□□ 0.31
HERC1-207ENST00000560316 HPSEQ9Y251 543 aa17.01■□□□□ 0.31
HERC1-207ENST00000560316 FARP1Q9Y4F1 1045 aaPredicted RBP17.01■□□□□ 0.31
HERC1-207ENST00000560316 OR51B4Q9Y5P0 310 aa17.01■□□□□ 0.31
HERC1-207ENST00000560316 HS3ST3A1Q9Y663 406 aa17.01■□□□□ 0.31
HERC1-207ENST00000560316 CSNK1G3Q9Y6M4 447 aa17.01■□□□□ 0.31
HERC1-207ENST00000560316 BSNQ9UPA5 3926 aa17.01■□□□□ 0.31
HERC1-207ENST00000560316 SYNJ2BP-COX16A0A087WUM0 186 aa17■□□□□ 0.31
HERC1-207ENST00000560316 CCDC187A0A096LP49 1063 aa17■□□□□ 0.31
HERC1-207ENST00000560316 SPTY2D1-AS1A0A0U1RR47 76 aa17■□□□□ 0.31
HERC1-207ENST00000560316 H3BM21 787 aa17■□□□□ 0.31
HERC1-207ENST00000560316 K7ELQ4 463 aaPredicted RBP17■□□□□ 0.31
HERC1-207ENST00000560316 K7ERQ8 282 aa17■□□□□ 0.31
HERC1-207ENST00000560316 RAD51BO15315 384 aa17■□□□□ 0.31
HERC1-207ENST00000560316 SART1O43290 800 aaKnown RBP17■□□□□ 0.31
HERC1-207ENST00000560316 SUV39H1O43463 412 aa17■□□□□ 0.31
HERC1-207ENST00000560316 TCEA3O75764 348 aa17■□□□□ 0.31
HERC1-207ENST00000560316 PAK4O96013 591 aaPredicted RBP17■□□□□ 0.31
HERC1-207ENST00000560316 ITGA2BP08514 1039 aa17■□□□□ 0.31
HERC1-207ENST00000560316 ITGB6P18564 788 aa17■□□□□ 0.31
HERC1-207ENST00000560316 CMA1P23946 247 aa17■□□□□ 0.31
HERC1-207ENST00000560316 RPL34P49207 117 aaKnown RBP17■□□□□ 0.31
HERC1-207ENST00000560316 CCDC15Q0P6D6 951 aa17■□□□□ 0.31
HERC1-207ENST00000560316 TGIF1Q15583 401 aa17■□□□□ 0.31
HERC1-207ENST00000560316 TPRG1LQ5T0D9 272 aa17■□□□□ 0.31
HERC1-207ENST00000560316 KYAT3Q6YP21 454 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms