RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 ERMARDQ5T6L9 678 aa5.38□□□□□ -1.55
SPG11-220ENST00000559933 NAIF1Q69YI7 327 aaPredicted RBP5.38□□□□□ -1.55
SPG11-220ENST00000559933 C1orf228Q6PIY5 440 aa5.38□□□□□ -1.55
SPG11-220ENST00000559933 TMEM184AQ6ZMB5 413 aa5.38□□□□□ -1.55
SPG11-220ENST00000559933 SPOCD1Q6ZMY3 1216 aa5.38□□□□□ -1.55
SPG11-220ENST00000559933 BEND5Q7L4P6 421 aa5.38□□□□□ -1.55
SPG11-220ENST00000559933 POLNQ7Z5Q5 900 aa5.38□□□□□ -1.55
SPG11-220ENST00000559933 TFAP2DQ7Z6R9 452 aa5.38□□□□□ -1.55
SPG11-220ENST00000559933 PRUNE1Q86TP1 453 aa5.38□□□□□ -1.55
SPG11-220ENST00000559933 CHSY1Q86X52 802 aa5.38□□□□□ -1.55
SPG11-220ENST00000559933 RFX6Q8HWS3 928 aa5.38□□□□□ -1.55
SPG11-220ENST00000559933 CREG2Q8IUH2 290 aa5.38□□□□□ -1.55
SPG11-220ENST00000559933 CCNJLQ8IV13 435 aa5.38□□□□□ -1.55
SPG11-220ENST00000559933 BBS7Q8IWZ6 715 aa5.38□□□□□ -1.55
SPG11-220ENST00000559933 KATNAL2Q8IYT4 538 aa5.38□□□□□ -1.55
SPG11-220ENST00000559933 CMTM8Q8IZV2 173 aa5.38□□□□□ -1.55
SPG11-220ENST00000559933 LGI2Q8N0V4 545 aa5.38□□□□□ -1.55
SPG11-220ENST00000559933 CFAP52Q8N1V2 620 aa5.38□□□□□ -1.55
SPG11-220ENST00000559933 NPWQ8N729 165 aa5.38□□□□□ -1.55
SPG11-220ENST00000559933 PQLC3Q8N755 202 aa5.38□□□□□ -1.55
SPG11-220ENST00000559933 KCTD6Q8NC69 237 aa5.38□□□□□ -1.55
SPG11-220ENST00000559933 SMRP1Q8NCR6 262 aa5.38□□□□□ -1.55
SPG11-220ENST00000559933 CMASQ8NFW8 434 aaPredicted RBP5.38□□□□□ -1.55
SPG11-220ENST00000559933 PCDH19Q8TAB3 1148 aa5.38□□□□□ -1.55
SPG11-220ENST00000559933 TTC8Q8TAM2 541 aa5.38□□□□□ -1.55
SPG11-220ENST00000559933 HDAC7Q8WUI4 952 aa5.38□□□□□ -1.55
SPG11-220ENST00000559933 DEPDC1BQ8WUY9 529 aa5.38□□□□□ -1.55
SPG11-220ENST00000559933 RSAD2Q8WXG1 361 aa5.38□□□□□ -1.55
SPG11-220ENST00000559933 FGF13Q92913 245 aa5.38□□□□□ -1.55
SPG11-220ENST00000559933 PPP2R3CQ969Q6 453 aa5.38□□□□□ -1.55
SPG11-220ENST00000559933 PABPC5Q96DU9 382 aaKnown RBP5.38□□□□□ -1.55
SPG11-220ENST00000559933 PGAP3Q96FM1 320 aaPredicted RBP5.38□□□□□ -1.55
SPG11-220ENST00000559933 CELF6Q96J87 481 aaKnown RBP5.38□□□□□ -1.55
SPG11-220ENST00000559933 CEP295NLQ96MC4 621 aa5.38□□□□□ -1.55
SPG11-220ENST00000559933 CSPG4P5Q96PW8 444 aa5.38□□□□□ -1.55
SPG11-220ENST00000559933 KXD1Q9BQD3 176 aa5.38□□□□□ -1.55
SPG11-220ENST00000559933 RPP25Q9BUL9 199 aaKnown RBP5.38□□□□□ -1.55
SPG11-220ENST00000559933 CALN1Q9BXU9 219 aa5.38□□□□□ -1.55
SPG11-220ENST00000559933 PLA2G2FQ9BZM2 168 aa5.38□□□□□ -1.55
SPG11-220ENST00000559933 LINC00597Q9H2U6 94 aa5.38□□□□□ -1.55
SPG11-220ENST00000559933 UBE2ZQ9H832 354 aaPredicted RBP5.38□□□□□ -1.55
SPG11-220ENST00000559933 OLA1Q9NTK5 396 aaKnown RBP5.38□□□□□ -1.55
SPG11-220ENST00000559933 PLK2Q9NYY3 685 aa5.38□□□□□ -1.55
SPG11-220ENST00000559933 CWC15Q9P013 229 aaKnown RBP5.38□□□□□ -1.55
SPG11-220ENST00000559933 CD207Q9UJ71 328 aa5.38□□□□□ -1.55
SPG11-220ENST00000559933 AGO1Q9UL18 857 aaKnown RBP5.38□□□□□ -1.55
SPG11-220ENST00000559933 VANGL2Q9ULK5 521 aa5.38□□□□□ -1.55
SPG11-220ENST00000559933 TLR6Q9Y2C9 796 aa5.38□□□□□ -1.55
SPG11-220ENST00000559933 PCDHA3Q9Y5H8 950 aa5.38□□□□□ -1.55
SPG11-220ENST00000559933 WNT6Q9Y6F9 365 aa5.38□□□□□ -1.55
SPG11-220ENST00000559933 NYNRINQ9P2P1 1898 aaKnown RBP5.37□□□□□ -1.55
SPG11-220ENST00000559933 KIF26AQ9ULI4 1882 aaPredicted RBP5.37□□□□□ -1.55
SPG11-220ENST00000559933 ANTXRLA6NF34 631 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 MIF4GDA9UHW6 222 aaKnown RBP5.37□□□□□ -1.55
SPG11-220ENST00000559933 E9PAM4 449 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 F5H423 210 aaPredicted RBP5.37□□□□□ -1.55
SPG11-220ENST00000559933 EEF2KO00418 725 aaKnown RBP5.37□□□□□ -1.55
SPG11-220ENST00000559933 ACSL4O60488 711 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 PAPLNO95428 1278 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 TGFB1P01137 390 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 FGGP02679 453 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 KRT7P08729 469 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 POU2F2P09086 479 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 ARSAP15289 507 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 MAP4P27816 1152 aaKnown RBP5.37□□□□□ -1.55
SPG11-220ENST00000559933 CCR1P32246 355 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 GBP1P32455 592 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 GBP2P32456 591 aaPredicted RBP5.37□□□□□ -1.55
SPG11-220ENST00000559933 AVPR1AP37288 418 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 TERF1P54274 439 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 TPI1P60174 286 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 RPS24P62847 133 aaKnown RBP5.37□□□□□ -1.55
SPG11-220ENST00000559933 SLC7A9P82251 487 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 GBE1Q04446 702 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 SCAPQ12770 1279 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 SEMA3BQ13214 749 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 SNX1Q13596 522 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 AUHQ13825 339 aaKnown RBP5.37□□□□□ -1.55
SPG11-220ENST00000559933 DPYSQ14117 519 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 DPYSL2Q16555 572 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 ANKRD20A8PQ5CZ79 823 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 BRMS1LQ5PSV4 323 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 SEL1L2Q5TEA6 688 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 MANEALQ5VSG8 457 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 LRRC38Q5VT99 294 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 NCBP2-AS2Q69YL0 99 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 TANGO2Q6ICL3 276 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 RWDD4Q6NW29 188 aaKnown RBP5.37□□□□□ -1.55
SPG11-220ENST00000559933 FBXL22Q6P050 247 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 TTC27Q6P3X3 843 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 PAOXQ6QHF9 649 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 PARM1Q6UWI2 310 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 LEKR1Q6ZMV7 388 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 ARHGAP36Q6ZRI8 547 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 TPGS1Q6ZTW0 290 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 RFX8Q6ZV50 586 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 SND1Q7KZF4 910 aaKnown RBP eCLIP5.37□□□□□ -1.55
SPG11-220ENST00000559933 ARID3BQ8IVW6 561 aaPredicted RBP5.37□□□□□ -1.55
SPG11-220ENST00000559933 ZNF683Q8IZ20 524 aa5.37□□□□□ -1.55
SPG11-220ENST00000559933 UBL4BQ8N7F7 174 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms