RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 FBXO43Q4G163 708 aa14.64□□□□□ -0.07
SMAD6-204ENST00000559931 TIGD7Q6NT04 549 aaPredicted RBP14.64□□□□□ -0.07
SMAD6-204ENST00000559931 DARS2Q6PI48 645 aaKnown RBP14.64□□□□□ -0.07
SMAD6-204ENST00000559931 B4GALNT4Q76KP1 1039 aa14.64□□□□□ -0.07
SMAD6-204ENST00000559931 RASGEF1CQ8N431 466 aa14.64□□□□□ -0.07
SMAD6-204ENST00000559931 ZNF513Q8N8E2 541 aaPredicted RBP14.64□□□□□ -0.07
SMAD6-204ENST00000559931 TFB1MQ8WVM0 346 aaKnown RBP14.64□□□□□ -0.07
SMAD6-204ENST00000559931 C1orf54Q8WWF1 131 aa14.64□□□□□ -0.07
SMAD6-204ENST00000559931 LGMNQ99538 433 aa14.64□□□□□ -0.07
SMAD6-204ENST00000559931 FERMT1Q9BQL6 677 aa14.64□□□□□ -0.07
SMAD6-204ENST00000559931 BRD8Q9H0E9 1235 aa14.64□□□□□ -0.07
SMAD6-204ENST00000559931 ZDHHC4Q9NPG8 344 aa14.64□□□□□ -0.07
SMAD6-204ENST00000559931 RBM12Q9NTZ6 932 aaKnown RBP14.64□□□□□ -0.07
SMAD6-204ENST00000559931 SEPT10Q9P0V9 454 aa14.64□□□□□ -0.07
SMAD6-204ENST00000559931 UBA2Q9UBT2 640 aaPredicted RBP14.64□□□□□ -0.07
SMAD6-204ENST00000559931 MTF2Q9Y483 593 aaPredicted RBP14.64□□□□□ -0.07
SMAD6-204ENST00000559931 ZDBF2Q9HCK1 2354 aa14.63□□□□□ -0.07
SMAD6-204ENST00000559931 KRIT1O00522 736 aa14.63□□□□□ -0.07
SMAD6-204ENST00000559931 MAFKO60675 156 aa14.63□□□□□ -0.07
SMAD6-204ENST00000559931 PRAMEF11O60813 436 aa14.63□□□□□ -0.07
SMAD6-204ENST00000559931 RNF40O75150 1001 aa14.63□□□□□ -0.07
SMAD6-204ENST00000559931 ZMPSTE24O75844 475 aa14.63□□□□□ -0.07
SMAD6-204ENST00000559931 MT-CO1P00395 513 aa14.63□□□□□ -0.07
SMAD6-204ENST00000559931 SRPRAP08240 638 aaKnown RBP14.63□□□□□ -0.07
SMAD6-204ENST00000559931 CCNCP24863 283 aa14.63□□□□□ -0.07
SMAD6-204ENST00000559931 WASP42768 502 aa14.63□□□□□ -0.07
SMAD6-204ENST00000559931 ARF5P84085 180 aa14.63□□□□□ -0.07
SMAD6-204ENST00000559931 KLF1Q13351 362 aaPredicted RBP14.63□□□□□ -0.07
SMAD6-204ENST00000559931 XRCC4Q13426 336 aa14.63□□□□□ -0.07
SMAD6-204ENST00000559931 SNX1Q13596 522 aa14.63□□□□□ -0.07
SMAD6-204ENST00000559931 NOMO1Q15155 1222 aa14.63□□□□□ -0.07
SMAD6-204ENST00000559931 EGFLAMQ63HQ2 1017 aa14.63□□□□□ -0.07
SMAD6-204ENST00000559931 SERPINA13PQ6UXR4 307 aa14.63□□□□□ -0.07
SMAD6-204ENST00000559931 CCDC13Q8IYE1 715 aa14.63□□□□□ -0.07
SMAD6-204ENST00000559931 CHPFQ8IZ52 775 aa14.63□□□□□ -0.07
SMAD6-204ENST00000559931 ACTRT1Q8TDG2 376 aa14.63□□□□□ -0.07
SMAD6-204ENST00000559931 EZH1Q92800 747 aaPredicted RBP14.63□□□□□ -0.07
SMAD6-204ENST00000559931 TSGA13Q96PP4 275 aa14.63□□□□□ -0.07
SMAD6-204ENST00000559931 AP1M1Q9BXS5 423 aa14.63□□□□□ -0.07
SMAD6-204ENST00000559931 HOMER3Q9NSC5 361 aa14.63□□□□□ -0.07
SMAD6-204ENST00000559931 SMARCAL1Q9NZC9 954 aa14.63□□□□□ -0.07
SMAD6-204ENST00000559931 SLCO3A1Q9UIG8 710 aa14.63□□□□□ -0.07
SMAD6-204ENST00000559931 TTC7AQ9ULT0 858 aaPredicted RBP14.63□□□□□ -0.07
SMAD6-204ENST00000559931 R3HDM2Q9Y2K5 976 aaKnown RBP14.63□□□□□ -0.07
SMAD6-204ENST00000559931 STARD13Q9Y3M8 1113 aa14.63□□□□□ -0.07
SMAD6-204ENST00000559931 SIT1Q9Y3P8 196 aa14.63□□□□□ -0.07
SMAD6-204ENST00000559931 ACTL7AQ9Y615 435 aa14.63□□□□□ -0.07
SMAD6-204ENST00000559931 GOLGA6L10A0A0M3HER8 536 aa14.62□□□□□ -0.07
SMAD6-204ENST00000559931 ANTXRLA6NF34 631 aa14.62□□□□□ -0.07
SMAD6-204ENST00000559931 HACD1B0YJ81 288 aa14.62□□□□□ -0.07
SMAD6-204ENST00000559931 BNIP3LO60238 219 aa14.62□□□□□ -0.07
SMAD6-204ENST00000559931 KLF8O95600 359 aaPredicted RBP14.62□□□□□ -0.07
SMAD6-204ENST00000559931 PDGFBP01127 241 aaPredicted RBP14.62□□□□□ -0.07
SMAD6-204ENST00000559931 RBP3P10745 1247 aa14.62□□□□□ -0.07
SMAD6-204ENST00000559931 CHRNB1P11230 501 aa14.62□□□□□ -0.07
SMAD6-204ENST00000559931 MRPS21P82921 87 aaKnown RBP14.62□□□□□ -0.07
SMAD6-204ENST00000559931 PPIDQ08752 370 aaKnown RBP14.62□□□□□ -0.07
SMAD6-204ENST00000559931 CCINQ13939 588 aa14.62□□□□□ -0.07
SMAD6-204ENST00000559931 ZNF234Q14588 700 aa14.62□□□□□ -0.07
SMAD6-204ENST00000559931 TRMT11Q7Z4G4 463 aaKnown RBP14.62□□□□□ -0.07
SMAD6-204ENST00000559931 CREG2Q8IUH2 290 aa14.62□□□□□ -0.07
SMAD6-204ENST00000559931 CDKL3Q8IVW4 592 aaPredicted RBP14.62□□□□□ -0.07
SMAD6-204ENST00000559931 BBS5Q8N3I7 341 aa14.62□□□□□ -0.07
SMAD6-204ENST00000559931 SYNPOQ8N3V7 929 aa14.62□□□□□ -0.07
SMAD6-204ENST00000559931 ALLCQ8N6M5 410 aa14.62□□□□□ -0.07
SMAD6-204ENST00000559931 KCNV2Q8TDN2 545 aa14.62□□□□□ -0.07
SMAD6-204ENST00000559931 USP33Q8TEY7 942 aa14.62□□□□□ -0.07
SMAD6-204ENST00000559931 ATG4AQ8WYN0 398 aa14.62□□□□□ -0.07
SMAD6-204ENST00000559931 HDAC11Q96DB2 347 aa14.62□□□□□ -0.07
SMAD6-204ENST00000559931 OLFM3Q96PB7 478 aa14.62□□□□□ -0.07
SMAD6-204ENST00000559931 ACOX2Q99424 681 aa14.62□□□□□ -0.07
SMAD6-204ENST00000559931 FRMD8P1Q9BZ68 369 aaPredicted RBP14.62□□□□□ -0.07
SMAD6-204ENST00000559931 CACNA2D2Q9NY47 1150 aa14.62□□□□□ -0.07
SMAD6-204ENST00000559931 THAP10Q9P2Z0 257 aaPredicted RBP14.62□□□□□ -0.07
SMAD6-204ENST00000559931 RNF14Q9UBS8 474 aa14.62□□□□□ -0.07
SMAD6-204ENST00000559931 ZNF148Q9UQR1 794 aa14.62□□□□□ -0.07
SMAD6-204ENST00000559931 TTC34A8MYJ7 566 aa14.61□□□□□ -0.07
SMAD6-204ENST00000559931 WASH3PC4AMC7 463 aa14.61□□□□□ -0.07
SMAD6-204ENST00000559931 K7ERQ8 282 aa14.61□□□□□ -0.07
SMAD6-204ENST00000559931 NPC1O15118 1278 aa14.61□□□□□ -0.07
SMAD6-204ENST00000559931 MATN3O15232 486 aa14.61□□□□□ -0.07
SMAD6-204ENST00000559931 SMAD6O43541 496 aaKnown RBP14.61□□□□□ -0.07
SMAD6-204ENST00000559931 ZNF500O60304 480 aaPredicted RBP14.61□□□□□ -0.07
SMAD6-204ENST00000559931 STK10O94804 968 aaKnown RBP14.61□□□□□ -0.07
SMAD6-204ENST00000559931 SRCP12931 536 aa14.61□□□□□ -0.07
SMAD6-204ENST00000559931 CCNB1P14635 433 aa14.61□□□□□ -0.07
SMAD6-204ENST00000559931 HNRNPLP14866 589 aaKnown RBP eCLIP14.61□□□□□ -0.07
SMAD6-204ENST00000559931 NTSR1P30989 418 aa14.61□□□□□ -0.07
SMAD6-204ENST00000559931 KIR2DL1P43626 348 aaPredicted RBP14.61□□□□□ -0.07
SMAD6-204ENST00000559931 SERPINH1P50454 418 aaKnown RBP14.61□□□□□ -0.07
SMAD6-204ENST00000559931 RENBPP51606 427 aa14.61□□□□□ -0.07
SMAD6-204ENST00000559931 ITKQ08881 620 aa14.61□□□□□ -0.07
SMAD6-204ENST00000559931 BYSLQ13895 437 aaKnown RBP14.61□□□□□ -0.07
SMAD6-204ENST00000559931 ZNF235Q14590 738 aa14.61□□□□□ -0.07
SMAD6-204ENST00000559931 LBRQ14739 615 aaKnown RBP14.61□□□□□ -0.07
SMAD6-204ENST00000559931 DLG2Q15700 870 aa14.61□□□□□ -0.07
SMAD6-204ENST00000559931 CCNG2Q16589 344 aa14.61□□□□□ -0.07
SMAD6-204ENST00000559931 PTPRNQ16849 979 aa14.61□□□□□ -0.07
SMAD6-204ENST00000559931 SLC45A4Q5BKX6 768 aa14.61□□□□□ -0.07
SMAD6-204ENST00000559931 TMCO4Q5TGY1 634 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms