RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 GRAMD4Q6IC98 578 aa10.84□□□□□ -0.67
CARMIL3-202ENST00000559694 BBS12Q6ZW61 710 aa10.84□□□□□ -0.67
CARMIL3-202ENST00000559694 PTAR1Q7Z6K3 402 aaPredicted RBP10.84□□□□□ -0.67
CARMIL3-202ENST00000559694 TTC7BQ86TV6 843 aa10.84□□□□□ -0.67
CARMIL3-202ENST00000559694 ATXN2LQ8WWM7 1075 aaKnown RBP10.84□□□□□ -0.67
CARMIL3-202ENST00000559694 RIPOR3Q96MK2 946 aa10.84□□□□□ -0.67
CARMIL3-202ENST00000559694 TOX2Q96NM4 488 aa10.84□□□□□ -0.67
CARMIL3-202ENST00000559694 VAT1Q99536 393 aa10.84□□□□□ -0.67
CARMIL3-202ENST00000559694 MTO1Q9Y2Z2 717 aaKnown RBP10.84□□□□□ -0.67
CARMIL3-202ENST00000559694 CES2O00748 559 aa10.84□□□□□ -0.67
CARMIL3-202ENST00000559694 PTGESO14684 152 aa10.84□□□□□ -0.67
CARMIL3-202ENST00000559694 ADH1CP00326 375 aa10.84□□□□□ -0.67
CARMIL3-202ENST00000559694 C1RP00736 705 aa10.84□□□□□ -0.67
CARMIL3-202ENST00000559694 KRT4P19013 534 aa10.84□□□□□ -0.67
CARMIL3-202ENST00000559694 CDH17Q12864 832 aa10.84□□□□□ -0.67
CARMIL3-202ENST00000559694 CBX2Q14781 532 aaPredicted RBP10.84□□□□□ -0.67
CARMIL3-202ENST00000559694 CYTH1Q15438 398 aa10.84□□□□□ -0.67
CARMIL3-202ENST00000559694 TXNDC8Q6A555 127 aa10.84□□□□□ -0.67
CARMIL3-202ENST00000559694 SNRNP27Q8WVK2 155 aaKnown RBP10.84□□□□□ -0.67
CARMIL3-202ENST00000559694 TSPAN17Q96FV3 270 aa10.84□□□□□ -0.67
CARMIL3-202ENST00000559694 UPF3AQ9H1J1 476 aaKnown RBP10.84□□□□□ -0.67
CARMIL3-202ENST00000559694 LRCH1Q9Y2L9 728 aa10.84□□□□□ -0.67
CARMIL3-202ENST00000559694 ADGRA2Q96PE1 1338 aa10.84□□□□□ -0.67
CARMIL3-202ENST00000559694 SNRPAP09012 282 aaKnown RBP10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 ITGALP20701 1170 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 EEF1B2P24534 225 aaKnown RBP10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 RPL21P46778 160 aaKnown RBP10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 GJA8P48165 433 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 GPR15P49685 360 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 RGS4P49798 205 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 SGCGQ13326 291 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 ARMC12Q5T9G4 340 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 RIBC1Q8N443 379 aaPredicted RBP10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 SEMA3CQ99985 751 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 BCO2Q9BYV7 579 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 HAPLN2Q9GZV7 340 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 XYLT2Q9H1B5 865 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 RNPEPL1Q9HAU8 725 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 PTPRHQ9HD43 1115 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 WHRNQ9P202 907 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 PAIP2BQ9ULR5 123 aaKnown RBP10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 BAIAP3O94812 1187 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 ETS1P14921 441 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 PTPN4P29074 926 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 SERPINA4P29622 427 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 SERPINB9P50453 376 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 ATXN1P54253 815 aaKnown RBP10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 HABP4Q5JVS0 413 aaKnown RBP10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 CES3Q6UWW8 571 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 AGR3Q8TD06 166 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 FNIP1Q8TF40 1166 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 KLHL5Q96PQ7 755 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 DRC3Q9H069 523 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 MANSC1Q9H8J5 431 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 CYLDQ9NQC7 956 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 PCMTD2Q9NV79 361 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 COG5Q9UP83 839 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 ASB3Q9Y575 518 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 ECM29Q5VYK3 1845 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 hCG_1818297A0A087WSY0 165 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 BTNL10A8MVZ5 291 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 ZBTB42B2RXF5 422 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 ACSL4O60488 711 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 TTC4O95801 387 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 IL1BP01584 269 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 UNGP13051 313 aaPredicted RBP10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 CCNHP51946 323 aaPredicted RBP10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 SNRPD1P62314 119 aaKnown RBP10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 FSCBQ5H9T9 825 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 SYPL2Q5VXT5 272 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 ERAP2Q6P179 960 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 CCNJLQ8IV13 435 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 FAM126BQ8IXS8 530 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 ST13P5Q8NFI4 369 aaPredicted RBP10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 TASP1Q9H6P5 420 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 ZFP14Q9HCL3 533 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 GRIN2DO15399 1336 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 C2CD4BA6NLJ0 364 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 CLDN11O75508 207 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 CBX6O95503 412 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 FAM163BP0C2L3 166 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 TACR2P21452 398 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 GSCP56915 257 aaPredicted RBP10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 POLR2LP62875 67 aaKnown RBP10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 OCRLQ01968 901 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 DSG1Q02413 1049 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 BTKQ06187 659 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 CYLC2Q14093 348 aaPredicted RBP10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 KIAA1324Q6UXG2 1013 aaKnown RBP10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 ARHGAP22Q7Z5H3 698 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 SBF2Q86WG5 1849 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 MRPL46Q9H2W6 279 aaKnown RBP10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 IARS2Q9NSE4 1012 aaKnown RBP10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 SNX10Q9Y5X0 201 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 MYH4Q9Y623 1939 aa10.83□□□□□ -0.68
CARMIL3-202ENST00000559694 MTMR11A4FU01 709 aa10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 BUD23O43709 281 aaKnown RBP10.82□□□□□ -0.68
CARMIL3-202ENST00000559694 MGEA5O60502 916 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms