RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 TAF4BQ92750 862 aa9.21□□□□□ -0.94
SNRPA1-208ENST00000559686 DHX58Q96C10 678 aa9.21□□□□□ -0.94
SNRPA1-208ENST00000559686 BMFQ96LC9 184 aa9.21□□□□□ -0.94
SNRPA1-208ENST00000559686 DNAI2Q9GZS0 605 aa9.21□□□□□ -0.94
SNRPA1-208ENST00000559686 NIF3L1Q9GZT8 377 aa9.21□□□□□ -0.94
SNRPA1-208ENST00000559686 BLZF1Q9H2G9 400 aa9.21□□□□□ -0.94
SNRPA1-208ENST00000559686 TCEAL2Q9H3H9 227 aaPredicted RBP9.21□□□□□ -0.94
SNRPA1-208ENST00000559686 CYP3A43Q9HB55 503 aa9.21□□□□□ -0.94
SNRPA1-208ENST00000559686 SIRPGQ9P1W8 387 aa9.21□□□□□ -0.94
SNRPA1-208ENST00000559686 GULP1Q9UBP9 304 aa9.21□□□□□ -0.94
SNRPA1-208ENST00000559686 SMC3Q9UQE7 1217 aa9.21□□□□□ -0.94
SNRPA1-208ENST00000559686 SCN8AQ9UQD0 1980 aa9.21□□□□□ -0.94
SNRPA1-208ENST00000559686 LRRK1Q38SD2 2015 aa9.21□□□□□ -0.94
SNRPA1-208ENST00000559686 A1L4Q6 167 aa9.2□□□□□ -0.94
SNRPA1-208ENST00000559686 POM121BA6NF01 834 aa9.2□□□□□ -0.94
SNRPA1-208ENST00000559686 A6NNZ2 444 aa9.2□□□□□ -0.94
SNRPA1-208ENST00000559686 KPNA3O00505 521 aaPredicted RBP9.2□□□□□ -0.94
SNRPA1-208ENST00000559686 CD2BP2O95400 341 aaKnown RBP9.2□□□□□ -0.94
SNRPA1-208ENST00000559686 TRIM49P0CI25 452 aa9.2□□□□□ -0.94
SNRPA1-208ENST00000559686 TRIM49CP0CI26 452 aa9.2□□□□□ -0.94
SNRPA1-208ENST00000559686 CASRP41180 1078 aa9.2□□□□□ -0.94
SNRPA1-208ENST00000559686 GCLMP48507 274 aa9.2□□□□□ -0.94
SNRPA1-208ENST00000559686 RGS7P49802 495 aa9.2□□□□□ -0.94
SNRPA1-208ENST00000559686 MAPK10P53779 464 aa9.2□□□□□ -0.94
SNRPA1-208ENST00000559686 POLE2P56282 527 aa9.2□□□□□ -0.94
SNRPA1-208ENST00000559686 CLDN10P78369 228 aa9.2□□□□□ -0.94
SNRPA1-208ENST00000559686 MS4A13Q5J8X5 152 aa9.2□□□□□ -0.94
SNRPA1-208ENST00000559686 RAP1GAP2Q684P5 730 aa9.2□□□□□ -0.94
SNRPA1-208ENST00000559686 NUGGCQ68CJ6 796 aa9.2□□□□□ -0.94
SNRPA1-208ENST00000559686 BORAQ6PGQ7 559 aa9.2□□□□□ -0.94
SNRPA1-208ENST00000559686 ABI3BPQ7Z7G0 1075 aa9.2□□□□□ -0.94
SNRPA1-208ENST00000559686 HORMAD1Q86X24 394 aa9.2□□□□□ -0.94
SNRPA1-208ENST00000559686 SLC4A11Q8NBS3 891 aa9.2□□□□□ -0.94
SNRPA1-208ENST00000559686 TAS1R2Q8TE23 839 aa9.2□□□□□ -0.94
SNRPA1-208ENST00000559686 FRS2Q8WU20 508 aa9.2□□□□□ -0.94
SNRPA1-208ENST00000559686 LIN37Q96GY3 246 aaPredicted RBP9.2□□□□□ -0.94
SNRPA1-208ENST00000559686 ANP32EQ9BTT0 268 aa9.2□□□□□ -0.94
SNRPA1-208ENST00000559686 STRADBQ9C0K7 418 aa9.2□□□□□ -0.94
SNRPA1-208ENST00000559686 TNMDQ9H2S6 317 aa9.2□□□□□ -0.94
SNRPA1-208ENST00000559686 PREBQ9HCU5 417 aa9.2□□□□□ -0.94
SNRPA1-208ENST00000559686 ABCC13Q9NSE7 274 aa9.2□□□□□ -0.94
SNRPA1-208ENST00000559686 XPO7Q9UIA9 1087 aaKnown RBP9.2□□□□□ -0.94
SNRPA1-208ENST00000559686 ZFR2Q9UPR6 939 aaKnown RBP9.2□□□□□ -0.94
SNRPA1-208ENST00000559686 PCDHB11Q9Y5F2 797 aa9.2□□□□□ -0.94
SNRPA1-208ENST00000559686 PCDHGA7Q9Y5G6 932 aa9.2□□□□□ -0.94
SNRPA1-208ENST00000559686 USP9YO00507 2555 aaPredicted RBP9.2□□□□□ -0.94
SNRPA1-208ENST00000559686 RP1P56715 2156 aa9.2□□□□□ -0.94
SNRPA1-208ENST00000559686 TLN1Q9Y490 2541 aaKnown RBP9.2□□□□□ -0.94
SNRPA1-208ENST00000559686 RNF103O00237 685 aa9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 RAD51BO15315 384 aa9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 MTSS1O43312 755 aa9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 GCATO75600 419 aa9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 PAK4O96013 591 aaPredicted RBP9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 IGLV3-27P01718 113 aa9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 CSF2P04141 144 aa9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 NEFLP07196 543 aa9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 NME1P15531 152 aaKnown RBP9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 ETV5P41161 510 aa9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 RPIAP49247 311 aa9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 RAD23BP54727 409 aa9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 ADKP55263 362 aaKnown RBP9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 SNRPFP62306 86 aaKnown RBP9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 CCL7P80098 99 aa9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 NUCB2P80303 420 aa9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 PDE1CQ14123 709 aaPredicted RBP9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 MORC3Q14149 939 aa9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 DLG2Q15700 870 aa9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 KNOP1Q1ED39 458 aaKnown RBP9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 PRRT3Q5FWE3 981 aa9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 TPRG1LQ5T0D9 272 aa9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 C1orf220Q5T0J3 134 aa9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 PIP5KL1Q5T9C9 394 aa9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 PARGQ86W56 976 aa9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 CHSY1Q86X52 802 aa9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 C12orf56Q8IXR9 622 aa9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 SDR16C5Q8N3Y7 309 aa9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 ANKRD52Q8NB46 1076 aa9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 CLEC4CQ8WTT0 213 aa9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 GLMNQ92990 594 aa9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 USP7Q93009 1102 aa9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 CCDC74AQ96AQ1 378 aa9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 FAM131CQ96AQ9 280 aa9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 TMX3Q96JJ7 454 aa9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 GFM1Q96RP9 751 aaKnown RBP9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 DDX50Q9BQ39 737 aaKnown RBP9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 CPEB1Q9BZB8 566 aaKnown RBP9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 DYRK4Q9NR20 520 aa9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 NCKIPSDQ9NZQ3 722 aa9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 FOXJ2Q9P0K8 574 aa9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 SALL4Q9UJQ4 1053 aa9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 SLC25A13Q9UJS0 675 aa9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 TSPAN16Q9UKR8 245 aa9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 PPM1HQ9ULR3 514 aa9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 PADI4Q9UM07 663 aa9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 LOXL2Q9Y4K0 774 aa9.19□□□□□ -0.94
SNRPA1-208ENST00000559686 SPTY2D1-AS1A0A0U1RR47 76 aa9.18□□□□□ -0.94
SNRPA1-208ENST00000559686 XPO1O14980 1071 aaKnown RBP9.18□□□□□ -0.94
SNRPA1-208ENST00000559686 ANKRD17O75179 2603 aaKnown RBP9.18□□□□□ -0.94
SNRPA1-208ENST00000559686 AGFG2O95081 481 aa9.18□□□□□ -0.94
SNRPA1-208ENST00000559686 CELA2BP08218 269 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms