RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 GOT1P17174 413 aa12.88□□□□□ -0.35
LRRC28-214ENST00000559433 PBX1P40424 430 aa12.88□□□□□ -0.35
LRRC28-214ENST00000559433 MAPKAPK2P49137 400 aa12.88□□□□□ -0.35
LRRC28-214ENST00000559433 AFF3P51826 1226 aaKnown RBP12.88□□□□□ -0.35
LRRC28-214ENST00000559433 OGDHQ02218 1023 aa12.88□□□□□ -0.35
LRRC28-214ENST00000559433 GRIK2Q13002 908 aa12.88□□□□□ -0.35
LRRC28-214ENST00000559433 MAMLD1Q13495 774 aa12.88□□□□□ -0.35
LRRC28-214ENST00000559433 TDRD12Q587J7 1177 aaKnown RBP12.88□□□□□ -0.35
LRRC28-214ENST00000559433 FAM46CQ5VWP2 391 aa12.88□□□□□ -0.35
LRRC28-214ENST00000559433 KIAA0895LQ68EN5 471 aa12.88□□□□□ -0.35
LRRC28-214ENST00000559433 RETSATQ6NUM9 610 aa12.88□□□□□ -0.35
LRRC28-214ENST00000559433 NCEH1Q6PIU2 408 aa12.88□□□□□ -0.35
LRRC28-214ENST00000559433 TMC6Q7Z403 805 aa12.88□□□□□ -0.35
LRRC28-214ENST00000559433 ADAT2Q7Z6V5 191 aaKnown RBP12.88□□□□□ -0.35
LRRC28-214ENST00000559433 DEFB124Q8NES8 71 aa12.88□□□□□ -0.35
LRRC28-214ENST00000559433 OR2I1PQ8NGU4 316 aa12.88□□□□□ -0.35
LRRC28-214ENST00000559433 OR2T34Q8NGX1 318 aa12.88□□□□□ -0.35
LRRC28-214ENST00000559433 SKA1Q96BD8 255 aa12.88□□□□□ -0.35
LRRC28-214ENST00000559433 ZNF653Q96CK0 615 aa12.88□□□□□ -0.35
LRRC28-214ENST00000559433 CCDC114Q96M63 670 aa12.88□□□□□ -0.35
LRRC28-214ENST00000559433 MAGEB5Q9BZ81 275 aa12.88□□□□□ -0.35
LRRC28-214ENST00000559433 IFNKQ9P0W0 207 aa12.88□□□□□ -0.35
LRRC28-214ENST00000559433 DNAI1Q9UI46 699 aa12.88□□□□□ -0.35
LRRC28-214ENST00000559433 NEU3Q9UQ49 428 aa12.88□□□□□ -0.35
LRRC28-214ENST00000559433 PLK4O00444 970 aa12.87□□□□□ -0.35
LRRC28-214ENST00000559433 MCF2LO15068 1137 aa12.87□□□□□ -0.35
LRRC28-214ENST00000559433 SMAD6O43541 496 aaKnown RBP12.87□□□□□ -0.35
LRRC28-214ENST00000559433 RTN2O75298 545 aa12.87□□□□□ -0.35
LRRC28-214ENST00000559433 IGHV4-34P06331 123 aa12.87□□□□□ -0.35
LRRC28-214ENST00000559433 GZMAP12544 262 aa12.87□□□□□ -0.35
LRRC28-214ENST00000559433 RHOQP17081 205 aa12.87□□□□□ -0.35
LRRC28-214ENST00000559433 PSMA2P25787 234 aa12.87□□□□□ -0.35
LRRC28-214ENST00000559433 CD27P26842 260 aa12.87□□□□□ -0.35
LRRC28-214ENST00000559433 DRD3P35462 400 aa12.87□□□□□ -0.35
LRRC28-214ENST00000559433 ETFBP38117 255 aa12.87□□□□□ -0.35
LRRC28-214ENST00000559433 SERPINH1P50454 418 aaKnown RBP12.87□□□□□ -0.35
LRRC28-214ENST00000559433 CLCN6P51797 869 aa12.87□□□□□ -0.35
LRRC28-214ENST00000559433 METAP1P53582 386 aa12.87□□□□□ -0.35
LRRC28-214ENST00000559433 GALCP54803 685 aa12.87□□□□□ -0.35
LRRC28-214ENST00000559433 ADPRHP54922 357 aa12.87□□□□□ -0.35
LRRC28-214ENST00000559433 AIF1P55008 147 aa12.87□□□□□ -0.35
LRRC28-214ENST00000559433 CCDC15Q0P6D6 951 aa12.87□□□□□ -0.35
LRRC28-214ENST00000559433 SLC14A1Q13336 389 aa12.87□□□□□ -0.35
LRRC28-214ENST00000559433 POM121L1PQ3SYA9 428 aa12.87□□□□□ -0.35
LRRC28-214ENST00000559433 PLEKHA7Q6IQ23 1121 aa12.87□□□□□ -0.35
LRRC28-214ENST00000559433 C22orf39Q6P5X5 142 aa12.87□□□□□ -0.35
LRRC28-214ENST00000559433 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.87□□□□□ -0.35
LRRC28-214ENST00000559433 NLRP14Q86W24 1093 aa12.87□□□□□ -0.35
LRRC28-214ENST00000559433 PYROXD2Q8N2H3 581 aa12.87□□□□□ -0.35
LRRC28-214ENST00000559433 OR14C36Q8NHC7 312 aa12.87□□□□□ -0.35
LRRC28-214ENST00000559433 PIP4K2CQ8TBX8 421 aa12.87□□□□□ -0.35
LRRC28-214ENST00000559433 CPLX3Q8WVH0 158 aa12.87□□□□□ -0.35
LRRC28-214ENST00000559433 IQCDQ96DY2 449 aa12.87□□□□□ -0.35
LRRC28-214ENST00000559433 TRIM11Q96F44 468 aa12.87□□□□□ -0.35
LRRC28-214ENST00000559433 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.87□□□□□ -0.35
LRRC28-214ENST00000559433 RETREG1Q9H6L5 497 aa12.87□□□□□ -0.35
LRRC28-214ENST00000559433 NDFIP2Q9NV92 336 aa12.87□□□□□ -0.35
LRRC28-214ENST00000559433 TMEM248Q9NWD8 314 aa12.87□□□□□ -0.35
LRRC28-214ENST00000559433 CNOT8Q9UFF9 292 aaKnown RBP12.87□□□□□ -0.35
LRRC28-214ENST00000559433 ANGPTL2Q9UKU9 493 aa12.87□□□□□ -0.35
LRRC28-214ENST00000559433 SARDHQ9UL12 918 aa12.87□□□□□ -0.35
LRRC28-214ENST00000559433 PPM1HQ9ULR3 514 aa12.87□□□□□ -0.35
LRRC28-214ENST00000559433 FZD10Q9ULW2 581 aa12.87□□□□□ -0.35
LRRC28-214ENST00000559433 SLCO1B1Q9Y6L6 691 aa12.87□□□□□ -0.35
LRRC28-214ENST00000559433 TBC1D3DA0A087WVF3 549 aa12.86□□□□□ -0.35
LRRC28-214ENST00000559433 TBC1D3IA0A087WXS9 549 aa12.86□□□□□ -0.35
LRRC28-214ENST00000559433 TBC1D3EA0A087X179 549 aa12.86□□□□□ -0.35
LRRC28-214ENST00000559433 TBC1D3KA0A087X1G2 549 aa12.86□□□□□ -0.35
LRRC28-214ENST00000559433 TBC1D3FA6NER0 549 aaPredicted RBP12.86□□□□□ -0.35
LRRC28-214ENST00000559433 TBC1D3LB9A6J9 549 aa12.86□□□□□ -0.35
LRRC28-214ENST00000559433 GIPC1O14908 333 aa12.86□□□□□ -0.35
LRRC28-214ENST00000559433 CREB3O43889 395 aa12.86□□□□□ -0.35
LRRC28-214ENST00000559433 RAMP2O60895 175 aa12.86□□□□□ -0.35
LRRC28-214ENST00000559433 ZMPSTE24O75844 475 aa12.86□□□□□ -0.35
LRRC28-214ENST00000559433 CER1O95813 267 aa12.86□□□□□ -0.35
LRRC28-214ENST00000559433 TPM3P06753 285 aa12.86□□□□□ -0.35
LRRC28-214ENST00000559433 TBC1D3HP0C7X1 549 aa12.86□□□□□ -0.35
LRRC28-214ENST00000559433 EPHB2P29323 1055 aa12.86□□□□□ -0.35
LRRC28-214ENST00000559433 L1CAMP32004 1257 aa12.86□□□□□ -0.35
LRRC28-214ENST00000559433 ACVRL1P37023 503 aa12.86□□□□□ -0.35
LRRC28-214ENST00000559433 RECQLP46063 649 aaPredicted RBP12.86□□□□□ -0.35
LRRC28-214ENST00000559433 CSNK1EP49674 416 aaKnown RBP12.86□□□□□ -0.35
LRRC28-214ENST00000559433 C21orf59P57076 290 aa12.86□□□□□ -0.35
LRRC28-214ENST00000559433 ARF5P84085 180 aa12.86□□□□□ -0.35
LRRC28-214ENST00000559433 ZBED6P86452 979 aa12.86□□□□□ -0.35
LRRC28-214ENST00000559433 ZNF252P-AS1Q0IIN9 211 aa12.86□□□□□ -0.35
LRRC28-214ENST00000559433 HNRNPDQ14103 355 aaKnown RBP12.86□□□□□ -0.35
LRRC28-214ENST00000559433 SUZ12Q15022 739 aaKnown RBP12.86□□□□□ -0.35
LRRC28-214ENST00000559433 TBC1D3GQ6DHY5 549 aa12.86□□□□□ -0.35
LRRC28-214ENST00000559433 TBC1D3CQ6IPX1 549 aa12.86□□□□□ -0.35
LRRC28-214ENST00000559433 TBC1D3Q8IZP1 549 aaPredicted RBP12.86□□□□□ -0.35
LRRC28-214ENST00000559433 OR2A12Q8NGT7 310 aa12.86□□□□□ -0.35
LRRC28-214ENST00000559433 C1orf216Q8TAB5 229 aa12.86□□□□□ -0.35
LRRC28-214ENST00000559433 SYN2Q92777 582 aaPredicted RBP12.86□□□□□ -0.35
LRRC28-214ENST00000559433 ARHGEF2Q92974 986 aaKnown RBP12.86□□□□□ -0.35
LRRC28-214ENST00000559433 EPAS1Q99814 870 aa12.86□□□□□ -0.35
LRRC28-214ENST00000559433 CEP44Q9C0F1 390 aa12.86□□□□□ -0.35
LRRC28-214ENST00000559433 TNKS2Q9H2K2 1166 aa12.86□□□□□ -0.35
LRRC28-214ENST00000559433 TSPY26PQ9H489 355 aa12.86□□□□□ -0.35
LRRC28-214ENST00000559433 GAREM1Q9H706 876 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms