RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 A0A0D9SEW6 157 aa15.29■□□□□ 0.04
LRRC28-213ENST00000559399 PRAMEF26H0Y7S4 382 aa15.29■□□□□ 0.04
LRRC28-213ENST00000559399 KPNA3O00505 521 aaPredicted RBP15.29■□□□□ 0.04
LRRC28-213ENST00000559399 LDOC1O95751 146 aaPredicted RBP15.29■□□□□ 0.04
LRRC28-213ENST00000559399 PRNPP04156 253 aa15.29■□□□□ 0.04
LRRC28-213ENST00000559399 CTSLP07711 333 aa15.29■□□□□ 0.04
LRRC28-213ENST00000559399 MMEP08473 750 aa15.29■□□□□ 0.04
LRRC28-213ENST00000559399 RRM1P23921 792 aa15.29■□□□□ 0.04
LRRC28-213ENST00000559399 OR1E1P30953 314 aa15.29■□□□□ 0.04
LRRC28-213ENST00000559399 CHRNA3P32297 505 aa15.29■□□□□ 0.04
LRRC28-213ENST00000559399 RXRGP48443 463 aa15.29■□□□□ 0.04
LRRC28-213ENST00000559399 TAS2R38P59533 333 aa15.29■□□□□ 0.04
LRRC28-213ENST00000559399 NOMO3P69849 1222 aa15.29■□□□□ 0.04
LRRC28-213ENST00000559399 STAT4Q14765 748 aa15.29■□□□□ 0.04
LRRC28-213ENST00000559399 PIP5KL1Q5T9C9 394 aa15.29■□□□□ 0.04
LRRC28-213ENST00000559399 NAA35Q5VZE5 725 aa15.29■□□□□ 0.04
LRRC28-213ENST00000559399 TRNP1Q6NT89 227 aa15.29■□□□□ 0.04
LRRC28-213ENST00000559399 LINGO4Q6UY18 593 aa15.29■□□□□ 0.04
LRRC28-213ENST00000559399 ZNF783Q6ZMS7 281 aa15.29■□□□□ 0.04
LRRC28-213ENST00000559399 ARCQ7LC44 396 aa15.29■□□□□ 0.04
LRRC28-213ENST00000559399 TMPRSS12Q86WS5 348 aa15.29■□□□□ 0.04
LRRC28-213ENST00000559399 FAM131BQ86XD5 332 aa15.29■□□□□ 0.04
LRRC28-213ENST00000559399 SPATS2Q86XZ4 545 aaKnown RBP15.29■□□□□ 0.04
LRRC28-213ENST00000559399 EID2Q8N6I1 236 aa15.29■□□□□ 0.04
LRRC28-213ENST00000559399 CFAP57Q96MR6 1250 aa15.29■□□□□ 0.04
LRRC28-213ENST00000559399 HAPLN3Q96S86 360 aa15.29■□□□□ 0.04
LRRC28-213ENST00000559399 DYRK4Q9NR20 520 aa15.29■□□□□ 0.04
LRRC28-213ENST00000559399 TMPRSS4Q9NRS4 437 aa15.29■□□□□ 0.04
LRRC28-213ENST00000559399 TAB2Q9NYJ8 693 aa15.29■□□□□ 0.04
LRRC28-213ENST00000559399 TMEM59LQ9UK28 342 aa15.29■□□□□ 0.04
LRRC28-213ENST00000559399 GPSM3Q9Y4H4 160 aa15.29■□□□□ 0.04
LRRC28-213ENST00000559399 NUMA1Q14980 2115 aa15.28■□□□□ 0.04
LRRC28-213ENST00000559399 TRABD2BA6NFA1 517 aa15.28■□□□□ 0.04
LRRC28-213ENST00000559399 CBX4O00257 560 aa15.28■□□□□ 0.04
LRRC28-213ENST00000559399 SMAD6O43541 496 aaKnown RBP15.28■□□□□ 0.04
LRRC28-213ENST00000559399 RNGTTO60942 597 aaKnown RBP15.28■□□□□ 0.04
LRRC28-213ENST00000559399 SRGAP2O75044 1071 aa15.28■□□□□ 0.04
LRRC28-213ENST00000559399 RFPL3O75679 317 aa15.28■□□□□ 0.04
LRRC28-213ENST00000559399 CDK4P11802 303 aa15.28■□□□□ 0.04
LRRC28-213ENST00000559399 RECQLP46063 649 aaPredicted RBP15.28■□□□□ 0.04
LRRC28-213ENST00000559399 DNAJC3Q13217 504 aa15.28■□□□□ 0.04
LRRC28-213ENST00000559399 SFMBT2Q5VUG0 894 aa15.28■□□□□ 0.04
LRRC28-213ENST00000559399 RETSATQ6NUM9 610 aa15.28■□□□□ 0.04
LRRC28-213ENST00000559399 NEK5Q6P3R8 708 aa15.28■□□□□ 0.04
LRRC28-213ENST00000559399 C22orf39Q6P5X5 142 aa15.28■□□□□ 0.04
LRRC28-213ENST00000559399 BNIPLQ7Z465 357 aa15.28■□□□□ 0.04
LRRC28-213ENST00000559399 ZNF677Q86XU0 584 aa15.28■□□□□ 0.04
LRRC28-213ENST00000559399 PDCD7Q8N8D1 485 aaKnown RBP15.28■□□□□ 0.04
LRRC28-213ENST00000559399 TMIEQ8NEW7 156 aa15.28■□□□□ 0.04
LRRC28-213ENST00000559399 CPA5Q8WXQ8 436 aa15.28■□□□□ 0.04
LRRC28-213ENST00000559399 ZYG11BQ9C0D3 744 aa15.28■□□□□ 0.04
LRRC28-213ENST00000559399 RAXQ9Y2V3 346 aa15.28■□□□□ 0.04
LRRC28-213ENST00000559399 DMXL2Q8TDJ6 3036 aa15.28■□□□□ 0.04
LRRC28-213ENST00000559399 PKD1L2Q7Z442 2459 aa15.27■□□□□ 0.04
LRRC28-213ENST00000559399 A0A1W2PQU0 124 aa15.27■□□□□ 0.04
LRRC28-213ENST00000559399 ILVBLA1L0T0 632 aa15.27■□□□□ 0.04
LRRC28-213ENST00000559399 C1SP09871 688 aa15.27■□□□□ 0.04
LRRC28-213ENST00000559399 PRLRP16471 622 aa15.27■□□□□ 0.04
LRRC28-213ENST00000559399 HNF1BP35680 557 aa15.27■□□□□ 0.04
LRRC28-213ENST00000559399 ACADVLP49748 655 aa15.27■□□□□ 0.04
LRRC28-213ENST00000559399 CAMK2BQ13554 666 aa15.27■□□□□ 0.04
LRRC28-213ENST00000559399 HORMAD1Q86X24 394 aa15.27■□□□□ 0.04
LRRC28-213ENST00000559399 TMEM145Q8NBT3 493 aa15.27■□□□□ 0.04
LRRC28-213ENST00000559399 CHST14Q8NCH0 376 aa15.27■□□□□ 0.04
LRRC28-213ENST00000559399 OR7D4Q8NG98 312 aa15.27■□□□□ 0.04
LRRC28-213ENST00000559399 GRIN3AQ8TCU5 1115 aa15.27■□□□□ 0.04
LRRC28-213ENST00000559399 ARRDC3Q96B67 414 aa15.27■□□□□ 0.04
LRRC28-213ENST00000559399 PPP1R16AQ96I34 528 aa15.27■□□□□ 0.04
LRRC28-213ENST00000559399 SPON2Q9BUD6 331 aa15.27■□□□□ 0.04
LRRC28-213ENST00000559399 CEP44Q9C0F1 390 aa15.27■□□□□ 0.04
LRRC28-213ENST00000559399 GANQ9H2C0 597 aa15.27■□□□□ 0.04
LRRC28-213ENST00000559399 TNKS2Q9H2K2 1166 aa15.27■□□□□ 0.04
LRRC28-213ENST00000559399 ATP13A1Q9HD20 1204 aa15.27■□□□□ 0.04
LRRC28-213ENST00000559399 METTL5Q9NRN9 209 aaKnown RBP15.27■□□□□ 0.04
LRRC28-213ENST00000559399 ZNF212Q9UDV6 495 aa15.27■□□□□ 0.04
LRRC28-213ENST00000559399 IL36AQ9UHA7 158 aa15.27■□□□□ 0.04
LRRC28-213ENST00000559399 NOCTQ9UK39 431 aaKnown RBP15.27■□□□□ 0.04
LRRC28-213ENST00000559399 CA5BQ9Y2D0 317 aa15.27■□□□□ 0.04
LRRC28-213ENST00000559399 SLC31A1O15431 190 aa15.26■□□□□ 0.03
LRRC28-213ENST00000559399 GFPT2O94808 682 aa15.26■□□□□ 0.03
LRRC28-213ENST00000559399 TPM2P07951 284 aa15.26■□□□□ 0.03
LRRC28-213ENST00000559399 MMP8P22894 467 aa15.26■□□□□ 0.03
LRRC28-213ENST00000559399 GLDCP23378 1020 aa15.26■□□□□ 0.03
LRRC28-213ENST00000559399 SERPINH1P50454 418 aaKnown RBP15.26■□□□□ 0.03
LRRC28-213ENST00000559399 ATP11AP98196 1134 aa15.26■□□□□ 0.03
LRRC28-213ENST00000559399 CDR2Q01850 454 aa15.26■□□□□ 0.03
LRRC28-213ENST00000559399 CYP4F3Q08477 520 aa15.26■□□□□ 0.03
LRRC28-213ENST00000559399 BNIP3Q12983 259 aa15.26■□□□□ 0.03
LRRC28-213ENST00000559399 ZNF284Q2VY69 593 aa15.26■□□□□ 0.03
LRRC28-213ENST00000559399 ARSIQ5FYB1 569 aa15.26■□□□□ 0.03
LRRC28-213ENST00000559399 ARTNQ5T4W7 220 aa15.26■□□□□ 0.03
LRRC28-213ENST00000559399 C19orf48Q6RUI8 117 aa15.26■□□□□ 0.03
LRRC28-213ENST00000559399 DPY19L3Q6ZPD9 716 aa15.26■□□□□ 0.03
LRRC28-213ENST00000559399 ERN2Q76MJ5 926 aaKnown RBP15.26■□□□□ 0.03
LRRC28-213ENST00000559399 KANSL1Q7Z3B3 1105 aa15.26■□□□□ 0.03
LRRC28-213ENST00000559399 EMC1Q8N766 993 aa15.26■□□□□ 0.03
LRRC28-213ENST00000559399 ENOX1Q8TC92 643 aaKnown RBP15.26■□□□□ 0.03
LRRC28-213ENST00000559399 SLC20A1Q8WUM9 679 aa15.26■□□□□ 0.03
LRRC28-213ENST00000559399 TSC1Q92574 1164 aa15.26■□□□□ 0.03
LRRC28-213ENST00000559399 KLHDC7BQ96G42 594 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms