RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 ACE2Q9BYF1 805 aaPredicted RBP8.68□□□□□ -1.02
TPM1-213ENST00000558400 CEP44Q9C0F1 390 aa8.68□□□□□ -1.02
TPM1-213ENST00000558400 THAP2Q9H0W7 228 aa8.68□□□□□ -1.02
TPM1-213ENST00000558400 ATP13A1Q9HD20 1204 aa8.68□□□□□ -1.02
TPM1-213ENST00000558400 ABHD10Q9NUJ1 306 aa8.68□□□□□ -1.02
TPM1-213ENST00000558400 UVRAGQ9P2Y5 699 aa8.68□□□□□ -1.02
TPM1-213ENST00000558400 ZNF212Q9UDV6 495 aa8.68□□□□□ -1.02
TPM1-213ENST00000558400 SUSD2Q9UGT4 822 aa8.68□□□□□ -1.02
TPM1-213ENST00000558400 EVLQ9UI08 416 aaPredicted RBP8.68□□□□□ -1.02
TPM1-213ENST00000558400 SNX10Q9Y5X0 201 aa8.68□□□□□ -1.02
TPM1-213ENST00000558400 DCDC2BA2VCK2 349 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 C1QTNF3-AMACRE9PGA6 284 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 FAM72CH0Y354 149 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 DAPK3O43293 454 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 CREB3O43889 395 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 MFAP3LO75121 409 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 IL1BP01584 269 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 GOT1P17174 413 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 MIPP30301 263 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 STK19P49842 368 aaPredicted RBP8.67□□□□□ -1.02
TPM1-213ENST00000558400 NDST2P52849 883 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 GALCP54803 685 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 ADKP55263 362 aaKnown RBP8.67□□□□□ -1.02
TPM1-213ENST00000558400 TPI1P60174 286 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 TBX2Q13207 712 aaPredicted RBP8.67□□□□□ -1.02
TPM1-213ENST00000558400 SEMA3BQ13214 749 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 HADHQ16836 314 aaKnown RBP8.67□□□□□ -1.02
TPM1-213ENST00000558400 ASTE1Q2TB18 679 aaPredicted RBP8.67□□□□□ -1.02
TPM1-213ENST00000558400 PARP15Q460N3 678 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 RAB6CQ53S08 254 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 ARTNQ5T4W7 220 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 FAM72AQ5TYM5 149 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 ZFYVE26Q68DK2 2539 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 FAM72DQ6L9T8 149 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 FAM72BQ86X60 149 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 MMAAQ8IVH4 418 aaKnown RBP8.67□□□□□ -1.02
TPM1-213ENST00000558400 RGL4Q8IZJ4 473 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 ABCA7Q8IZY2 2146 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 UMODL1-AS1Q8N2C9 162 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 STK40Q8N2I9 435 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 LZTR1Q8N653 840 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 FRMD1Q8N878 549 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 NIPA2Q8N8Q9 360 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 RTL3Q8N8U3 475 aaKnown RBP8.67□□□□□ -1.02
TPM1-213ENST00000558400 TMIEQ8NEW7 156 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 NETO1Q8TDF5 533 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 GANCQ8TET4 914 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 CASKIN2Q8WXE0 1202 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 DNASE2BQ8WZ79 361 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 ARHGEF2Q92974 986 aaKnown RBP8.67□□□□□ -1.02
TPM1-213ENST00000558400 ERLEC1Q96DZ1 483 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 MRFAP1L1Q96HT8 127 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 PSMB7Q99436 277 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 NUP85Q9BW27 656 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 GPR174Q9BXC1 333 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 NUSAP1Q9BXS6 441 aaKnown RBP8.67□□□□□ -1.02
TPM1-213ENST00000558400 RAB6CQ9H0N0 254 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 SLC6A17Q9H1V8 727 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 PABPC3Q9H361 631 aaKnown RBP8.67□□□□□ -1.02
TPM1-213ENST00000558400 KDM4CQ9H3R0 1056 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 DHX35Q9H5Z1 703 aaKnown RBP8.67□□□□□ -1.02
TPM1-213ENST00000558400 ZWILCHQ9H900 591 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 NHEJ1Q9H9Q4 299 aaPredicted RBP8.67□□□□□ -1.02
TPM1-213ENST00000558400 PARD6AQ9NPB6 346 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 FBXL12Q9NXK8 326 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 PCSK1NQ9UHG2 260 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 DNAI1Q9UI46 699 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 VPS51Q9UID3 782 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 PILRBQ9UKJ0 227 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 INTUQ9ULD6 942 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 PPM1HQ9ULR3 514 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 FZD4Q9ULV1 537 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 AP4E1Q9UPM8 1137 aa8.67□□□□□ -1.02
TPM1-213ENST00000558400 LRRC72A6NJI9 287 aa8.66□□□□□ -1.02
TPM1-213ENST00000558400 EEF2KO00418 725 aaKnown RBP8.66□□□□□ -1.02
TPM1-213ENST00000558400 SLC7A4O43246 635 aa8.66□□□□□ -1.02
TPM1-213ENST00000558400 KDELR3O43731 214 aa8.66□□□□□ -1.02
TPM1-213ENST00000558400 SNAP91O60641 907 aa8.66□□□□□ -1.02
TPM1-213ENST00000558400 LRCH4O75427 683 aa8.66□□□□□ -1.02
TPM1-213ENST00000558400 ZMPSTE24O75844 475 aa8.66□□□□□ -1.02
TPM1-213ENST00000558400 SEMA4FO95754 770 aa8.66□□□□□ -1.02
TPM1-213ENST00000558400 MT-CO1P00395 513 aa8.66□□□□□ -1.02
TPM1-213ENST00000558400 PRNPP04156 253 aa8.66□□□□□ -1.02
TPM1-213ENST00000558400 SYPP08247 313 aa8.66□□□□□ -1.02
TPM1-213ENST00000558400 SERPINF2P08697 491 aa8.66□□□□□ -1.02
TPM1-213ENST00000558400 SRCP12931 536 aa8.66□□□□□ -1.02
TPM1-213ENST00000558400 ARL4AP40617 200 aa8.66□□□□□ -1.02
TPM1-213ENST00000558400 ARHGAP25P42331 645 aa8.66□□□□□ -1.02
TPM1-213ENST00000558400 PTGER3P43115 390 aa8.66□□□□□ -1.02
TPM1-213ENST00000558400 LIMK1P53667 647 aa8.66□□□□□ -1.02
TPM1-213ENST00000558400 GFPT1Q06210 699 aaPredicted RBP8.66□□□□□ -1.02
TPM1-213ENST00000558400 RAD51Q06609 339 aa8.66□□□□□ -1.02
TPM1-213ENST00000558400 AASDHQ4L235 1098 aaPredicted RBP8.66□□□□□ -1.02
TPM1-213ENST00000558400 INO80DQ53TQ3 878 aaPredicted RBP8.66□□□□□ -1.02
TPM1-213ENST00000558400 PEAR1Q5VY43 1037 aaPredicted RBP8.66□□□□□ -1.02
TPM1-213ENST00000558400 SLC23A3Q6PIS1 610 aa8.66□□□□□ -1.02
TPM1-213ENST00000558400 RHOT2Q8IXI1 618 aa8.66□□□□□ -1.02
TPM1-213ENST00000558400 CCDC170Q8IYT3 715 aa8.66□□□□□ -1.02
TPM1-213ENST00000558400 PYROXD2Q8N2H3 581 aa8.66□□□□□ -1.02
TPM1-213ENST00000558400 HDDC3Q8N4P3 179 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms