RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 NFKB1P19838 968 aa14.15□□□□□ -0.14
SPG11-210ENST00000558319 PNPLA4P41247 253 aa14.15□□□□□ -0.14
SPG11-210ENST00000558319 TBX4P57082 545 aa14.15□□□□□ -0.14
SPG11-210ENST00000558319 USP46P62068 366 aa14.15□□□□□ -0.14
SPG11-210ENST00000558319 ERVK-9P63128 1117 aa14.15□□□□□ -0.14
SPG11-210ENST00000558319 MCL1Q07820 350 aa14.15□□□□□ -0.14
SPG11-210ENST00000558319 HLA-DQA1Q5Y7H0 255 aa14.15□□□□□ -0.14
SPG11-210ENST00000558319 ZNF544Q6NX49 715 aa14.15□□□□□ -0.14
SPG11-210ENST00000558319 CLYBLQ8N0X4 340 aa14.15□□□□□ -0.14
SPG11-210ENST00000558319 TMEM132CQ8N3T6 1108 aa14.15□□□□□ -0.14
SPG11-210ENST00000558319 AGO4Q9HCK5 861 aaKnown RBP14.15□□□□□ -0.14
SPG11-210ENST00000558319 ACSS2Q9NR19 701 aa14.15□□□□□ -0.14
SPG11-210ENST00000558319 TBC1D3BA6NDS4 549 aa14.15□□□□□ -0.14
SPG11-210ENST00000558319 CCNA2P20248 432 aa14.15□□□□□ -0.14
SPG11-210ENST00000558319 BACE1P56817 501 aa14.15□□□□□ -0.14
SPG11-210ENST00000558319 LDLRAP1Q5SW96 308 aa14.15□□□□□ -0.14
SPG11-210ENST00000558319 KCNMB4Q86W47 210 aa14.15□□□□□ -0.14
SPG11-210ENST00000558319 FRMD6Q96NE9 622 aa14.15□□□□□ -0.14
SPG11-210ENST00000558319 EPB41L4BQ9H329 900 aa14.15□□□□□ -0.14
SPG11-210ENST00000558319 CRISPLD1Q9H336 500 aa14.15□□□□□ -0.14
SPG11-210ENST00000558319 CPSF1Q10570 1443 aaKnown RBP14.15□□□□□ -0.14
SPG11-210ENST00000558319 CES2O00748 559 aa14.15□□□□□ -0.14
SPG11-210ENST00000558319 PIRTP0C851 137 aa14.15□□□□□ -0.14
SPG11-210ENST00000558319 TYMPP19971 482 aa14.15□□□□□ -0.14
SPG11-210ENST00000558319 PSMD4P55036 377 aaKnown RBP14.15□□□□□ -0.14
SPG11-210ENST00000558319 MGAT5Q09328 741 aa14.15□□□□□ -0.14
SPG11-210ENST00000558319 CCNG2Q16589 344 aa14.15□□□□□ -0.14
SPG11-210ENST00000558319 GRTP1Q5TC63 336 aa14.15□□□□□ -0.14
SPG11-210ENST00000558319 BROXQ5VW32 411 aa14.15□□□□□ -0.14
SPG11-210ENST00000558319 ARHGEF40Q8TER5 1519 aa14.15□□□□□ -0.14
SPG11-210ENST00000558319 ADORA2AP29274 412 aa14.15□□□□□ -0.14
SPG11-210ENST00000558319 PPP2R1BP30154 601 aa14.15□□□□□ -0.14
SPG11-210ENST00000558319 GJA8P48165 433 aa14.15□□□□□ -0.14
SPG11-210ENST00000558319 POLD2P49005 469 aa14.15□□□□□ -0.14
SPG11-210ENST00000558319 GIT2Q14161 759 aa14.15□□□□□ -0.14
SPG11-210ENST00000558319 FBXW8Q8N3Y1 598 aa14.15□□□□□ -0.14
SPG11-210ENST00000558319 OMDQ99983 421 aa14.15□□□□□ -0.14
SPG11-210ENST00000558319 ANAPC2Q9UJX6 822 aa14.15□□□□□ -0.14
SPG11-210ENST00000558319 SPATA31A1Q5TZJ5 1347 aa14.15□□□□□ -0.14
SPG11-210ENST00000558319 SCRN3Q0VDG4 424 aa14.15□□□□□ -0.15
SPG11-210ENST00000558319 DENND5AQ6IQ26 1287 aa14.15□□□□□ -0.15
SPG11-210ENST00000558319 POLNQ7Z5Q5 900 aa14.15□□□□□ -0.15
SPG11-210ENST00000558319 AMIGO2Q86SJ2 522 aa14.15□□□□□ -0.15
SPG11-210ENST00000558319 OR10G6Q8NH81 332 aa14.15□□□□□ -0.15
SPG11-210ENST00000558319 ADGRE3Q9BY15 652 aa14.15□□□□□ -0.15
SPG11-210ENST00000558319 SEMA4BQ9NPR2 832 aaPredicted RBP14.15□□□□□ -0.15
SPG11-210ENST00000558319 RFX7Q2KHR2 1363 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 GAKO14976 1311 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 A0A096LPK6 155 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 LACTBL1A8MY62 500 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 TSPAN4O14817 238 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 IL1R1P14778 569 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 CCNJLQ8IV13 435 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 FBXO39Q8N4B4 442 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 EXOC2Q96KP1 924 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 CORO1BQ9BR76 489 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 TBC1D10AQ9BXI6 508 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 REEP1Q9H902 201 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 ELL3Q9HB65 397 aaPredicted RBP14.14□□□□□ -0.15
SPG11-210ENST00000558319 ZNF224Q9NZL3 707 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 CLEC4AQ9UMR7 237 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 TECPR2O15040 1411 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 BTN3A1O00481 513 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 KPNA5O15131 536 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 TEX28O15482 410 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 CRTAMO95727 393 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 SLC26A3P40879 764 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 CEBPGP53567 150 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 MSLNQ13421 630 aaPredicted RBP14.14□□□□□ -0.15
SPG11-210ENST00000558319 MFSD10Q14728 455 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 PDK2Q15119 407 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 SLC15A2Q16348 729 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 IRAK1BP1Q5VVH5 260 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 IQCF2Q8IXL9 164 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 ELMO1Q92556 727 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 REXO5Q96IC2 774 aaKnown RBP14.14□□□□□ -0.15
SPG11-210ENST00000558319 FRMD8P1Q9BZ68 369 aaPredicted RBP14.14□□□□□ -0.15
SPG11-210ENST00000558319 SF3B1O75533 1304 aaKnown RBP eCLIP14.14□□□□□ -0.154e-8■■■■■ 34.5
SPG11-210ENST00000558319 CDC40O60508 579 aaKnown RBP eCLIP14.14□□□□□ -0.15
SPG11-210ENST00000558319 NDUFS2O75306 463 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 NTRK1P04629 796 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 CYP4B1P13584 511 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 ATF4P18848 351 aaPredicted RBP14.14□□□□□ -0.15
SPG11-210ENST00000558319 BCAT1P54687 386 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 PFKPQ01813 784 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 ZCCHC8Q6NZY4 707 aaKnown RBP14.14□□□□□ -0.15
SPG11-210ENST00000558319 ZHX1-C8orf76Q96EF9 292 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 MLPHQ9BV36 600 aaPredicted RBP14.14□□□□□ -0.15
SPG11-210ENST00000558319 TM6SF2Q9BZW4 377 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 SAR1AQ9NR31 198 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 HBS1LQ9Y450 684 aaKnown RBP14.14□□□□□ -0.15
SPG11-210ENST00000558319 DGKBQ9Y6T7 804 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 TMEM114B3SHH9 223 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 ZSCAN5DPP0CG00 497 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 VDRP11473 427 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 ARF4P18085 180 aaPredicted RBP14.14□□□□□ -0.15
SPG11-210ENST00000558319 NET1Q7Z628 596 aaPredicted RBP14.14□□□□□ -0.15
SPG11-210ENST00000558319 OR6K2Q8NGY2 324 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 H3BRB1 525 aa14.14□□□□□ -0.15
SPG11-210ENST00000558319 OR6A2O95222 327 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms