RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 LINC00271P0C7V0 271 aa6.57□□□□□ -1.36
RTF1-204ENST00000558117 DRD4P21917 467 aa6.57□□□□□ -1.36
RTF1-204ENST00000558117 SP100P23497 879 aaPredicted RBP6.57□□□□□ -1.36
RTF1-204ENST00000558117 PDE1AP54750 535 aa6.57□□□□□ -1.36
RTF1-204ENST00000558117 SLC29A2Q14542 456 aa6.57□□□□□ -1.36
RTF1-204ENST00000558117 COG2Q14746 738 aa6.57□□□□□ -1.36
RTF1-204ENST00000558117 CCDC6Q16204 474 aa6.57□□□□□ -1.36
RTF1-204ENST00000558117 MAP9Q49MG5 647 aa6.57□□□□□ -1.36
RTF1-204ENST00000558117 SLC9A4Q6AI14 798 aa6.57□□□□□ -1.36
RTF1-204ENST00000558117 IL31Q6EBC2 164 aa6.57□□□□□ -1.36
RTF1-204ENST00000558117 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.57□□□□□ -1.36
RTF1-204ENST00000558117 ADGRD2Q7Z7M1 963 aa6.57□□□□□ -1.36
RTF1-204ENST00000558117 IZUMO1Q8IYV9 350 aa6.57□□□□□ -1.36
RTF1-204ENST00000558117 MAML2Q8IZL2 1156 aaPredicted RBP6.57□□□□□ -1.36
RTF1-204ENST00000558117 LRRC71Q8N4P6 559 aa6.57□□□□□ -1.36
RTF1-204ENST00000558117 PI4KAP1Q8N8J0 262 aa6.57□□□□□ -1.36
RTF1-204ENST00000558117 PARD3BQ8TEW8 1205 aa6.57□□□□□ -1.36
RTF1-204ENST00000558117 OSCP1Q8WVF1 389 aa6.57□□□□□ -1.36
RTF1-204ENST00000558117 ERVK-5Q9HDB9 667 aa6.57□□□□□ -1.36
RTF1-204ENST00000558117 HOXC10Q9NYD6 342 aa6.57□□□□□ -1.36
RTF1-204ENST00000558117 C2CD3Q4AC94 2353 aa6.56□□□□□ -1.36
RTF1-204ENST00000558117 ANO9A1A5B4 782 aa6.56□□□□□ -1.36
RTF1-204ENST00000558117 POM121BA6NF01 834 aa6.56□□□□□ -1.36
RTF1-204ENST00000558117 C2CD4DB7Z1M9 353 aa6.56□□□□□ -1.36
RTF1-204ENST00000558117 CCP110O43303 1012 aa6.56□□□□□ -1.36
RTF1-204ENST00000558117 RRP9O43818 475 aaKnown RBP6.56□□□□□ -1.36
RTF1-204ENST00000558117 NBNO60934 754 aa6.56□□□□□ -1.36
RTF1-204ENST00000558117 SRGAP2O75044 1071 aa6.56□□□□□ -1.36
RTF1-204ENST00000558117 DDX58O95786 925 aaKnown RBP6.56□□□□□ -1.36
RTF1-204ENST00000558117 MYL1P05976 194 aa6.56□□□□□ -1.36
RTF1-204ENST00000558117 RB1P06400 928 aa6.56□□□□□ -1.36
RTF1-204ENST00000558117 PARP1P09874 1014 aaKnown RBP6.56□□□□□ -1.36
RTF1-204ENST00000558117 ACVR2AP27037 513 aa6.56□□□□□ -1.36
RTF1-204ENST00000558117 ITPKBP27987 946 aa6.56□□□□□ -1.36
RTF1-204ENST00000558117 NEK3P51956 506 aa6.56□□□□□ -1.36
RTF1-204ENST00000558117 TPTEP56180 551 aa6.56□□□□□ -1.36
RTF1-204ENST00000558117 MRPS21P82921 87 aaKnown RBP6.56□□□□□ -1.36
RTF1-204ENST00000558117 ZNF750Q32MQ0 723 aa6.56□□□□□ -1.36
RTF1-204ENST00000558117 RRAGBQ5VZM2 374 aa6.56□□□□□ -1.36
RTF1-204ENST00000558117 ANKRD16Q6P6B7 361 aa6.56□□□□□ -1.36
RTF1-204ENST00000558117 C19orf48Q6RUI8 117 aa6.56□□□□□ -1.36
RTF1-204ENST00000558117 WDR53Q7Z5U6 358 aaPredicted RBP6.56□□□□□ -1.36
RTF1-204ENST00000558117 YAF2Q8IY57 180 aa6.56□□□□□ -1.36
RTF1-204ENST00000558117 SPARTQ8N0X7 666 aa6.56□□□□□ -1.36
RTF1-204ENST00000558117 RNF152Q8N8N0 203 aa6.56□□□□□ -1.36
RTF1-204ENST00000558117 ZBTB45Q96K62 511 aaPredicted RBP6.56□□□□□ -1.36
RTF1-204ENST00000558117 TRIM5Q9C035 493 aa6.56□□□□□ -1.36
RTF1-204ENST00000558117 S1PR5Q9H228 398 aa6.56□□□□□ -1.36
RTF1-204ENST00000558117 PNPLA8Q9NP80 782 aa6.56□□□□□ -1.36
RTF1-204ENST00000558117 RXFP3Q9NSD7 469 aa6.56□□□□□ -1.36
RTF1-204ENST00000558117 GJB4Q9NTQ9 266 aa6.56□□□□□ -1.36
RTF1-204ENST00000558117 DLGAP2Q9P1A6 1054 aa6.56□□□□□ -1.36
RTF1-204ENST00000558117 PADI4Q9UM07 663 aa6.56□□□□□ -1.36
RTF1-204ENST00000558117 MAPK8IP3Q9UPT6 1336 aa6.55□□□□□ -1.36
RTF1-204ENST00000558117 FBN2P35556 2912 aa6.55□□□□□ -1.36
RTF1-204ENST00000558117 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.55□□□□□ -1.36
RTF1-204ENST00000558117 LRRC3CA6NJW4 275 aa6.55□□□□□ -1.36
RTF1-204ENST00000558117 FOXN3O00409 490 aaPredicted RBP6.55□□□□□ -1.36
RTF1-204ENST00000558117 RGS10O43665 173 aa6.55□□□□□ -1.36
RTF1-204ENST00000558117 C1QL1O75973 258 aa6.55□□□□□ -1.36
RTF1-204ENST00000558117 SLC25A27O95847 323 aa6.55□□□□□ -1.36
RTF1-204ENST00000558117 MMP1P03956 469 aa6.55□□□□□ -1.36
RTF1-204ENST00000558117 ANXA2P07355 339 aaKnown RBP6.55□□□□□ -1.36
RTF1-204ENST00000558117 FAM163BP0C2L3 166 aa6.55□□□□□ -1.36
RTF1-204ENST00000558117 FBLP22087 321 aaKnown RBP6.55□□□□□ -1.36
RTF1-204ENST00000558117 IL1R2P27930 398 aa6.55□□□□□ -1.36
RTF1-204ENST00000558117 BTDP43251 543 aa6.55□□□□□ -1.36
RTF1-204ENST00000558117 CPT1AP50416 773 aa6.55□□□□□ -1.36
RTF1-204ENST00000558117 NEXNQ0ZGT2 675 aa6.55□□□□□ -1.36
RTF1-204ENST00000558117 BFSP2Q13515 415 aa6.55□□□□□ -1.36
RTF1-204ENST00000558117 CCDC57Q2TAC2 916 aa6.55□□□□□ -1.36
RTF1-204ENST00000558117 SUMO4Q6EEV6 95 aa6.55□□□□□ -1.36
RTF1-204ENST00000558117 CEP85Q6P2H3 762 aa6.55□□□□□ -1.36
RTF1-204ENST00000558117 SLC29A4Q7RTT9 530 aa6.55□□□□□ -1.36
RTF1-204ENST00000558117 SPATA18Q8TC71 538 aa6.55□□□□□ -1.36
RTF1-204ENST00000558117 ACER1Q8TDN7 264 aa6.55□□□□□ -1.36
RTF1-204ENST00000558117 ATP8B4Q8TF62 1192 aa6.55□□□□□ -1.36
RTF1-204ENST00000558117 XAGE5Q8WWM1 108 aa6.55□□□□□ -1.36
RTF1-204ENST00000558117 DHX36Q9H2U1 1008 aaKnown RBP6.55□□□□□ -1.36
RTF1-204ENST00000558117 ABHD16BQ9H3Z7 469 aa6.55□□□□□ -1.36
RTF1-204ENST00000558117 PI4KBQ9UBF8 816 aa6.55□□□□□ -1.36
RTF1-204ENST00000558117 DKK4Q9UBT3 224 aa6.55□□□□□ -1.36
RTF1-204ENST00000558117 ZNF212Q9UDV6 495 aa6.55□□□□□ -1.36
RTF1-204ENST00000558117 ADAM21Q9UKJ8 722 aa6.55□□□□□ -1.36
RTF1-204ENST00000558117 RAI2Q9Y5P3 530 aa6.55□□□□□ -1.36
RTF1-204ENST00000558117 FBN3Q75N90 2809 aa6.55□□□□□ -1.36
RTF1-204ENST00000558117 TANC1Q9C0D5 1861 aa6.55□□□□□ -1.36
RTF1-204ENST00000558117 KAT6AQ92794 2004 aa6.55□□□□□ -1.36
RTF1-204ENST00000558117 COL12A1Q99715 3063 aa6.55□□□□□ -1.36
RTF1-204ENST00000558117 ZNFX1Q9P2E3 1918 aaKnown RBP6.54□□□□□ -1.36
RTF1-204ENST00000558117 CELSR3Q9NYQ7 3312 aa6.54□□□□□ -1.36
RTF1-204ENST00000558117 PIAS2O75928 621 aa6.54□□□□□ -1.36
RTF1-204ENST00000558117 CSPG5O95196 566 aa6.54□□□□□ -1.36
RTF1-204ENST00000558117 PRB1P04280 392 aa6.54□□□□□ -1.36
RTF1-204ENST00000558117 HNRNPCP07910 306 aaKnown RBP eCLIP6.54□□□□□ -1.36
RTF1-204ENST00000558117 NBPF7P0C2Y1 421 aaPredicted RBP6.54□□□□□ -1.36
RTF1-204ENST00000558117 TSHRP16473 764 aa6.54□□□□□ -1.36
RTF1-204ENST00000558117 TPH1P17752 444 aa6.54□□□□□ -1.36
RTF1-204ENST00000558117 CTNNB1P35222 781 aa6.54□□□□□ -1.36
RTF1-204ENST00000558117 NRIP1P48552 1158 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms