RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 RBM17Q96I25 401 aaKnown RBP3.66□□□□□ -1.82
SPG11-206ENST00000558093 ZNF333Q96JL9 665 aa3.66□□□□□ -1.82
SPG11-206ENST00000558093 ZPBPQ9BS86 351 aa3.66□□□□□ -1.82
SPG11-206ENST00000558093 NTPCRQ9BSD7 190 aaKnown RBP3.66□□□□□ -1.82
SPG11-206ENST00000558093 POLDIP3Q9BY77 421 aaKnown RBP3.66□□□□□ -1.82
SPG11-206ENST00000558093 MYLK2Q9H1R3 596 aa3.66□□□□□ -1.82
SPG11-206ENST00000558093 RMI1Q9H9A7 625 aa3.66□□□□□ -1.82
SPG11-206ENST00000558093 SLC22A11Q9NSA0 550 aa3.66□□□□□ -1.82
SPG11-206ENST00000558093 ZDHHC7Q9NXF8 308 aa3.66□□□□□ -1.82
SPG11-206ENST00000558093 FZD10Q9ULW2 581 aa3.66□□□□□ -1.82
SPG11-206ENST00000558093 EVPLQ92817 2033 aa3.66□□□□□ -1.82
SPG11-206ENST00000558093 IRAK2O43187 625 aa3.65□□□□□ -1.83
SPG11-206ENST00000558093 HBP1O60381 514 aa3.65□□□□□ -1.83
SPG11-206ENST00000558093 TCEA3O75764 348 aa3.65□□□□□ -1.83
SPG11-206ENST00000558093 METTL18O95568 372 aa3.65□□□□□ -1.83
SPG11-206ENST00000558093 UNGP13051 313 aaPredicted RBP3.65□□□□□ -1.83
SPG11-206ENST00000558093 TNNT1P13805 278 aa3.65□□□□□ -1.83
SPG11-206ENST00000558093 ARSBP15848 533 aa3.65□□□□□ -1.83
SPG11-206ENST00000558093 RXRAP19793 462 aa3.65□□□□□ -1.83
SPG11-206ENST00000558093 RFC1P35251 1148 aaPredicted RBP3.65□□□□□ -1.83
SPG11-206ENST00000558093 ADD2P35612 726 aa3.65□□□□□ -1.83
SPG11-206ENST00000558093 AVPR1AP37288 418 aa3.65□□□□□ -1.83
SPG11-206ENST00000558093 MLH1P40692 756 aa3.65□□□□□ -1.83
SPG11-206ENST00000558093 GRK6P43250 576 aa3.65□□□□□ -1.83
SPG11-206ENST00000558093 RASSF2P50749 326 aa3.65□□□□□ -1.83
SPG11-206ENST00000558093 ROR2Q01974 943 aaKnown RBP3.65□□□□□ -1.83
SPG11-206ENST00000558093 GRAMD1BQ3KR37 738 aa3.65□□□□□ -1.83
SPG11-206ENST00000558093 ZNF484Q5JVG2 852 aa3.65□□□□□ -1.83
SPG11-206ENST00000558093 DCAF12L2Q5VW00 463 aa3.65□□□□□ -1.83
SPG11-206ENST00000558093 RUSC1-AS1Q66K80 236 aa3.65□□□□□ -1.83
SPG11-206ENST00000558093 AADACL2Q6P093 401 aa3.65□□□□□ -1.83
SPG11-206ENST00000558093 RASGRP2Q7LDG7 609 aa3.65□□□□□ -1.83
SPG11-206ENST00000558093 TMEM57Q8N5G2 664 aa3.65□□□□□ -1.83
SPG11-206ENST00000558093 ANKRD44Q8N8A2 993 aa3.65□□□□□ -1.83
SPG11-206ENST00000558093 SCAIQ8N9R8 606 aa3.65□□□□□ -1.83
SPG11-206ENST00000558093 ADAMTS15Q8TE58 950 aa3.65□□□□□ -1.83
SPG11-206ENST00000558093 TEFMQ96QE5 360 aaKnown RBP3.65□□□□□ -1.83
SPG11-206ENST00000558093 WDR77Q9BQA1 342 aaPredicted RBP3.65□□□□□ -1.83
SPG11-206ENST00000558093 DCLK3Q9C098 648 aa3.65□□□□□ -1.83
SPG11-206ENST00000558093 PLAC1Q9HBJ0 212 aa3.65□□□□□ -1.83
SPG11-206ENST00000558093 PLK2Q9NYY3 685 aa3.65□□□□□ -1.83
SPG11-206ENST00000558093 PLEKHB1Q9UF11 243 aaPredicted RBP3.65□□□□□ -1.83
SPG11-206ENST00000558093 SUFUQ9UMX1 484 aa3.65□□□□□ -1.83
SPG11-206ENST00000558093 RRP7AQ9Y3A4 280 aaKnown RBP3.65□□□□□ -1.83
SPG11-206ENST00000558093 RIPOR2Q9Y4F9 1068 aa3.65□□□□□ -1.83
SPG11-206ENST00000558093 OR6C75A6NL08 312 aa3.64□□□□□ -1.83
SPG11-206ENST00000558093 KRTAP29-1A8MX34 341 aaPredicted RBP3.64□□□□□ -1.83
SPG11-206ENST00000558093 LIASO43766 372 aa3.64□□□□□ -1.83
SPG11-206ENST00000558093 KIF1CO43896 1103 aaKnown RBP3.64□□□□□ -1.83
SPG11-206ENST00000558093 NBNO60934 754 aa3.64□□□□□ -1.83
SPG11-206ENST00000558093 DDAH2O95865 285 aa3.64□□□□□ -1.83
SPG11-206ENST00000558093 TK1P04183 234 aa3.64□□□□□ -1.83
SPG11-206ENST00000558093 NGFRP08138 427 aa3.64□□□□□ -1.83
SPG11-206ENST00000558093 AVPR2P30518 371 aa3.64□□□□□ -1.83
SPG11-206ENST00000558093 HOXA11P31270 313 aaPredicted RBP3.64□□□□□ -1.83
SPG11-206ENST00000558093 ARRB2P32121 409 aa3.64□□□□□ -1.83
SPG11-206ENST00000558093 SELENOVP59797 346 aa3.64□□□□□ -1.83
SPG11-206ENST00000558093 ACTR2P61160 394 aa3.64□□□□□ -1.83
SPG11-206ENST00000558093 ARHGAP8P85298 464 aa3.64□□□□□ -1.83
SPG11-206ENST00000558093 BYSLQ13895 437 aaKnown RBP3.64□□□□□ -1.83
SPG11-206ENST00000558093 ERV3-1Q14264 604 aa3.64□□□□□ -1.83
SPG11-206ENST00000558093 TAF5Q15542 800 aa3.64□□□□□ -1.83
SPG11-206ENST00000558093 AP5B1Q2VPB7 878 aa3.64□□□□□ -1.83
SPG11-206ENST00000558093 DNTTIP2Q5QJE6 756 aaKnown RBP3.64□□□□□ -1.83
SPG11-206ENST00000558093 FAM83BQ5T0W9 1011 aa3.64□□□□□ -1.83
SPG11-206ENST00000558093 ANO1Q5XXA6 986 aa3.64□□□□□ -1.83
SPG11-206ENST00000558093 HEPHL1Q6MZM0 1159 aa3.64□□□□□ -1.83
SPG11-206ENST00000558093 C2CD5Q86YS7 1000 aa3.64□□□□□ -1.83
SPG11-206ENST00000558093 GHDCQ8N2G8 530 aa3.64□□□□□ -1.83
SPG11-206ENST00000558093 KDM1BQ8NB78 822 aa3.64□□□□□ -1.83
SPG11-206ENST00000558093 SPATA5Q8NB90 893 aa3.64□□□□□ -1.83
SPG11-206ENST00000558093 ENGASEQ8NFI3 743 aa3.64□□□□□ -1.83
SPG11-206ENST00000558093 LINS1Q8NG48 757 aa3.64□□□□□ -1.83
SPG11-206ENST00000558093 CEP70Q8NHQ1 597 aa3.64□□□□□ -1.83
SPG11-206ENST00000558093 B4GALNT2Q8NHY0 566 aa3.64□□□□□ -1.83
SPG11-206ENST00000558093 CEP76Q8TAP6 659 aa3.64□□□□□ -1.83
SPG11-206ENST00000558093 BICD2Q8TD16 824 aa3.64□□□□□ -1.83
SPG11-206ENST00000558093 NCSTNQ92542 709 aa3.64□□□□□ -1.83
SPG11-206ENST00000558093 MIB2Q96AX9 1013 aa3.64□□□□□ -1.83
SPG11-206ENST00000558093 ZNF479Q96JC4 524 aa3.64□□□□□ -1.83
SPG11-206ENST00000558093 CAMK1GQ96NX5 476 aa3.64□□□□□ -1.83
SPG11-206ENST00000558093 ARPC5LQ9BPX5 153 aa3.64□□□□□ -1.83
SPG11-206ENST00000558093 PCDHA7Q9UN72 937 aa3.64□□□□□ -1.83
SPG11-206ENST00000558093 DERAQ9Y315 318 aa3.64□□□□□ -1.83
SPG11-206ENST00000558093 PTGDR2Q9Y5Y4 395 aa3.64□□□□□ -1.83
SPG11-206ENST00000558093 CKAP5Q14008 2032 aa3.63□□□□□ -1.83
SPG11-206ENST00000558093 A0A0A0MQY5 61 aa3.63□□□□□ -1.83
SPG11-206ENST00000558093 A0A1B0GVT2 93 aa3.63□□□□□ -1.83
SPG11-206ENST00000558093 C17orf102A2RUQ5 167 aa3.63□□□□□ -1.83
SPG11-206ENST00000558093 BECN2A8MW95 431 aa3.63□□□□□ -1.83
SPG11-206ENST00000558093 MS4A18H0YCH9 400 aa3.63□□□□□ -1.83
SPG11-206ENST00000558093 STX16-NPEPL1H3BU86 382 aa3.63□□□□□ -1.83
SPG11-206ENST00000558093 STX16O14662 325 aa3.63□□□□□ -1.83
SPG11-206ENST00000558093 RNMTO43148 476 aaKnown RBP3.63□□□□□ -1.83
SPG11-206ENST00000558093 ANP32CO43423 234 aa3.63□□□□□ -1.83
SPG11-206ENST00000558093 RGS14O43566 566 aa3.63□□□□□ -1.83
SPG11-206ENST00000558093 SPRY3O43610 288 aa3.63□□□□□ -1.83
SPG11-206ENST00000558093 IL1AP01583 271 aa3.63□□□□□ -1.83
SPG11-206ENST00000558093 MMP3P08254 477 aa3.63□□□□□ -1.83
SPG11-206ENST00000558093 MYZAPP0CAP1 466 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms