RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 MUC3BQ9H195 1237 aa16.35■□□□□ 0.21
SCFD1-224ENST00000557713 WDCPQ9H6R7 721 aa16.35■□□□□ 0.21
SCFD1-224ENST00000557713 RRN3Q9NYV6 651 aa16.35■□□□□ 0.21
SCFD1-224ENST00000557713 A0A1W2PQU0 124 aa16.34■□□□□ 0.21
SCFD1-224ENST00000557713 K7ERQ8 282 aa16.34■□□□□ 0.21
SCFD1-224ENST00000557713 RNF103O00237 685 aa16.34■□□□□ 0.21
SCFD1-224ENST00000557713 SMAD6O43541 496 aaKnown RBP16.34■□□□□ 0.21
SCFD1-224ENST00000557713 SIGLEC6O43699 453 aa16.34■□□□□ 0.21
SCFD1-224ENST00000557713 SNAP91O60641 907 aa16.34■□□□□ 0.21
SCFD1-224ENST00000557713 SDC3O75056 442 aa16.34■□□□□ 0.21
SCFD1-224ENST00000557713 CHRNA3P32297 505 aa16.34■□□□□ 0.21
SCFD1-224ENST00000557713 ABCG1P45844 678 aa16.34■□□□□ 0.21
SCFD1-224ENST00000557713 SEMG2Q02383 582 aa16.34■□□□□ 0.21
SCFD1-224ENST00000557713 ZNF211Q13398 564 aaPredicted RBP16.34■□□□□ 0.21
SCFD1-224ENST00000557713 BRMS1LQ5PSV4 323 aa16.34■□□□□ 0.21
SCFD1-224ENST00000557713 ARTNQ5T4W7 220 aa16.34■□□□□ 0.21
SCFD1-224ENST00000557713 SLC47A2Q86VL8 602 aa16.34■□□□□ 0.21
SCFD1-224ENST00000557713 ZDHHC17Q8IUH5 632 aa16.34■□□□□ 0.21
SCFD1-224ENST00000557713 ATP11CQ8NB49 1132 aa16.34■□□□□ 0.21
SCFD1-224ENST00000557713 ARRDC3Q96B67 414 aa16.34■□□□□ 0.21
SCFD1-224ENST00000557713 PGAP3Q96FM1 320 aaPredicted RBP16.34■□□□□ 0.21
SCFD1-224ENST00000557713 C2orf49Q9BVC5 232 aaPredicted RBP16.34■□□□□ 0.21
SCFD1-224ENST00000557713 PLCB1Q9NQ66 1216 aa16.34■□□□□ 0.21
SCFD1-224ENST00000557713 KIAA1468Q9P260 1216 aa16.34■□□□□ 0.21
SCFD1-224ENST00000557713 VPS51Q9UID3 782 aa16.34■□□□□ 0.21
SCFD1-224ENST00000557713 DNAJC12Q9UKB3 198 aa16.34■□□□□ 0.21
SCFD1-224ENST00000557713 FARP1Q9Y4F1 1045 aaPredicted RBP16.34■□□□□ 0.21
SCFD1-224ENST00000557713 AK5Q9Y6K8 562 aa16.34■□□□□ 0.21
SCFD1-224ENST00000557713 SLC31A1O15431 190 aa16.33■□□□□ 0.2
SCFD1-224ENST00000557713 RHOCP08134 193 aa16.33■□□□□ 0.2
SCFD1-224ENST00000557713 THEGLP0DJG4 465 aa16.33■□□□□ 0.2
SCFD1-224ENST00000557713 DGKAP23743 735 aa16.33■□□□□ 0.2
SCFD1-224ENST00000557713 INSM1Q01101 510 aaPredicted RBP16.33■□□□□ 0.2
SCFD1-224ENST00000557713 KCNMA1Q12791 1236 aa16.33■□□□□ 0.2
SCFD1-224ENST00000557713 ZNF284Q2VY69 593 aa16.33■□□□□ 0.2
SCFD1-224ENST00000557713 DPY19L2P1Q6NXN4 242 aa16.33■□□□□ 0.2
SCFD1-224ENST00000557713 SETD3Q86TU7 594 aaPredicted RBP16.33■□□□□ 0.2
SCFD1-224ENST00000557713 HORMAD1Q86X24 394 aa16.33■□□□□ 0.2
SCFD1-224ENST00000557713 FAM71AQ8IYT1 594 aa16.33■□□□□ 0.2
SCFD1-224ENST00000557713 DCBLD1Q8N8Z6 715 aa16.33■□□□□ 0.2
SCFD1-224ENST00000557713 CHST14Q8NCH0 376 aa16.33■□□□□ 0.2
SCFD1-224ENST00000557713 KLK6Q92876 244 aa16.33■□□□□ 0.2
SCFD1-224ENST00000557713 C1orf74Q96LT6 269 aa16.33■□□□□ 0.2
SCFD1-224ENST00000557713 SYNCQ9H7C4 482 aa16.33■□□□□ 0.2
SCFD1-224ENST00000557713 KLHL11Q9NVR0 708 aa16.33■□□□□ 0.2
SCFD1-224ENST00000557713 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.33■□□□□ 0.2
SCFD1-224ENST00000557713 SNX10Q9Y5X0 201 aa16.33■□□□□ 0.2
SCFD1-224ENST00000557713 DOCK9Q9BZ29 2069 aa16.33■□□□□ 0.2
SCFD1-224ENST00000557713 IGLV3-10A0A075B6K4 115 aa16.32■□□□□ 0.2
SCFD1-224ENST00000557713 A0A0D9SEW6 157 aa16.32■□□□□ 0.2
SCFD1-224ENST00000557713 KPNA3O00505 521 aaPredicted RBP16.32■□□□□ 0.2
SCFD1-224ENST00000557713 F9P00740 461 aa16.32■□□□□ 0.2
SCFD1-224ENST00000557713 PRNPP04156 253 aa16.32■□□□□ 0.2
SCFD1-224ENST00000557713 PNMA6AP0CW24 399 aaPredicted RBP16.32■□□□□ 0.2
SCFD1-224ENST00000557713 GIMD1P0DJR0 217 aa16.32■□□□□ 0.2
SCFD1-224ENST00000557713 PRLRP16471 622 aa16.32■□□□□ 0.2
SCFD1-224ENST00000557713 GLDCP23378 1020 aa16.32■□□□□ 0.2
SCFD1-224ENST00000557713 RRM1P23921 792 aa16.32■□□□□ 0.2
SCFD1-224ENST00000557713 CDH5P33151 784 aaPredicted RBP16.32■□□□□ 0.2
SCFD1-224ENST00000557713 GABRB2P47870 512 aa16.32■□□□□ 0.2
SCFD1-224ENST00000557713 CLCN6P51797 869 aa16.32■□□□□ 0.2
SCFD1-224ENST00000557713 RNASE9P60153 205 aaKnown RBP16.32■□□□□ 0.2
SCFD1-224ENST00000557713 E2F1Q01094 437 aa16.32■□□□□ 0.2
SCFD1-224ENST00000557713 CCDC15Q0P6D6 951 aa16.32■□□□□ 0.2
SCFD1-224ENST00000557713 DCAF4L2Q8NA75 395 aa16.32■□□□□ 0.2
SCFD1-224ENST00000557713 OR4C6Q8NH72 309 aa16.32■□□□□ 0.2
SCFD1-224ENST00000557713 CCDC114Q96M63 670 aa16.32■□□□□ 0.2
SCFD1-224ENST00000557713 MYOCQ99972 504 aa16.32■□□□□ 0.2
SCFD1-224ENST00000557713 HDAC8Q9BY41 377 aa16.32■□□□□ 0.2
SCFD1-224ENST00000557713 PRORYQ9H606 182 aa16.32■□□□□ 0.2
SCFD1-224ENST00000557713 TMPRSS4Q9NRS4 437 aa16.32■□□□□ 0.2
SCFD1-224ENST00000557713 UCKL1Q9NWZ5 548 aa16.32■□□□□ 0.2
SCFD1-224ENST00000557713 ZFR2Q9UPR6 939 aaKnown RBP16.32■□□□□ 0.2
SCFD1-224ENST00000557713 CLCA2Q9UQC9 943 aa16.32■□□□□ 0.2
SCFD1-224ENST00000557713 ARID1BQ8NFD5 2236 aaPredicted RBP16.31■□□□□ 0.2
SCFD1-224ENST00000557713 ZNF821O75541 412 aaPredicted RBP16.31■□□□□ 0.2
SCFD1-224ENST00000557713 SCNN1AP37088 669 aa16.31■□□□□ 0.2
SCFD1-224ENST00000557713 MTIF2P46199 727 aaKnown RBP16.31■□□□□ 0.2
SCFD1-224ENST00000557713 SULT1E1P49888 294 aa16.31■□□□□ 0.2
SCFD1-224ENST00000557713 DEUP1Q05D60 604 aa16.31■□□□□ 0.2
SCFD1-224ENST00000557713 CAMK4Q16566 473 aa16.31■□□□□ 0.2
SCFD1-224ENST00000557713 SLC25A52Q3SY17 297 aa16.31■□□□□ 0.2
SCFD1-224ENST00000557713 ARSIQ5FYB1 569 aa16.31■□□□□ 0.2
SCFD1-224ENST00000557713 ACBD5Q5T8D3 534 aaPredicted RBP16.31■□□□□ 0.2
SCFD1-224ENST00000557713 LRRC31Q6UY01 552 aa16.31■□□□□ 0.2
SCFD1-224ENST00000557713 LINGO4Q6UY18 593 aa16.31■□□□□ 0.2
SCFD1-224ENST00000557713 LRRC69Q6ZNQ3 347 aa16.31■□□□□ 0.2
SCFD1-224ENST00000557713 ERN2Q76MJ5 926 aaKnown RBP16.31■□□□□ 0.2
SCFD1-224ENST00000557713 OR13H1Q8NG92 308 aa16.31■□□□□ 0.2
SCFD1-224ENST00000557713 SNIP1Q8TAD8 396 aaKnown RBP16.31■□□□□ 0.2
SCFD1-224ENST00000557713 UBL7Q96S82 380 aaPredicted RBP16.31■□□□□ 0.2
SCFD1-224ENST00000557713 TBCBQ99426 244 aa16.31■□□□□ 0.2
SCFD1-224ENST00000557713 CAAP1Q9H8G2 361 aa16.31■□□□□ 0.2
SCFD1-224ENST00000557713 FZD3Q9NPG1 666 aa16.31■□□□□ 0.2
SCFD1-224ENST00000557713 TMEM51Q9NW97 253 aa16.31■□□□□ 0.2
SCFD1-224ENST00000557713 MPP6Q9NZW5 540 aa16.31■□□□□ 0.2
SCFD1-224ENST00000557713 ZNF212Q9UDV6 495 aa16.31■□□□□ 0.2
SCFD1-224ENST00000557713 STAP1Q9ULZ2 295 aa16.31■□□□□ 0.2
SCFD1-224ENST00000557713 RAI2Q9Y5P3 530 aa16.31■□□□□ 0.2
SCFD1-224ENST00000557713 KNTC1P50748 2209 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms