RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 C2orf42Q9NWW7 574 aa15.6■□□□□ 0.09
NEDD1-213ENST00000557644 R3HDM2Q9Y2K5 976 aaKnown RBP15.6■□□□□ 0.09
NEDD1-213ENST00000557644 APOC4-APOC2K7ER74 178 aa15.6■□□□□ 0.09
NEDD1-213ENST00000557644 PRAMEF11O60813 436 aa15.6■□□□□ 0.09
NEDD1-213ENST00000557644 APOC2P02655 101 aa15.6■□□□□ 0.09
NEDD1-213ENST00000557644 FGGP02679 453 aa15.6■□□□□ 0.09
NEDD1-213ENST00000557644 HLA-EP13747 358 aa15.6■□□□□ 0.09
NEDD1-213ENST00000557644 OTUD4Q01804 1114 aaKnown RBP15.6■□□□□ 0.09
NEDD1-213ENST00000557644 LRRC32Q14392 662 aa15.6■□□□□ 0.09
NEDD1-213ENST00000557644 FNDC3BQ53EP0 1204 aaKnown RBP15.6■□□□□ 0.09
NEDD1-213ENST00000557644 PAPD7Q5XG87 772 aaKnown RBP15.6■□□□□ 0.09
NEDD1-213ENST00000557644 ATP11CQ8NB49 1132 aa15.6■□□□□ 0.09
NEDD1-213ENST00000557644 TXNDC5Q8NBS9 432 aaKnown RBP15.6■□□□□ 0.09
NEDD1-213ENST00000557644 CCNYQ8ND76 341 aa15.6■□□□□ 0.09
NEDD1-213ENST00000557644 ACTL9Q8TC94 416 aa15.6■□□□□ 0.09
NEDD1-213ENST00000557644 PBXIP1Q96AQ6 731 aa15.6■□□□□ 0.09
NEDD1-213ENST00000557644 CLDN23Q96B33 292 aa15.6■□□□□ 0.09
NEDD1-213ENST00000557644 SP110Q9HB58 689 aa15.6■□□□□ 0.09
NEDD1-213ENST00000557644 WDFY4Q6ZS81 3184 aa15.6■□□□□ 0.09
NEDD1-213ENST00000557644 TTC34A8MYJ7 566 aa15.59■□□□□ 0.09
NEDD1-213ENST00000557644 ADAM23O75077 832 aa15.59■□□□□ 0.09
NEDD1-213ENST00000557644 KLF8O95600 359 aaPredicted RBP15.59■□□□□ 0.09
NEDD1-213ENST00000557644 ASLP04424 464 aa15.59■□□□□ 0.09
NEDD1-213ENST00000557644 HNRNPLP14866 589 aaKnown RBP eCLIP15.59■□□□□ 0.09
NEDD1-213ENST00000557644 VAV1P15498 845 aa15.59■□□□□ 0.09
NEDD1-213ENST00000557644 PRKCHP24723 683 aa15.59■□□□□ 0.09
NEDD1-213ENST00000557644 ZC3H18Q86VM9 953 aaKnown RBP15.59■□□□□ 0.09
NEDD1-213ENST00000557644 OSBPL6Q9BZF3 934 aa15.59■□□□□ 0.09
NEDD1-213ENST00000557644 C10orf88Q9H8K7 445 aa15.59■□□□□ 0.09
NEDD1-213ENST00000557644 SLC25A13Q9UJS0 675 aa15.59■□□□□ 0.09
NEDD1-213ENST00000557644 HS3ST2Q9Y278 367 aa15.59■□□□□ 0.09
NEDD1-213ENST00000557644 FCF1Q9Y324 198 aaKnown RBP15.59■□□□□ 0.09
NEDD1-213ENST00000557644 SGK1O00141 431 aa15.58■□□□□ 0.09
NEDD1-213ENST00000557644 PEX11BO96011 259 aa15.58■□□□□ 0.09
NEDD1-213ENST00000557644 SRCP12931 536 aa15.58■□□□□ 0.09
NEDD1-213ENST00000557644 CASQ1P31415 396 aa15.58■□□□□ 0.09
NEDD1-213ENST00000557644 NR2C2P49116 596 aa15.58■□□□□ 0.09
NEDD1-213ENST00000557644 SERPINH1P50454 418 aaKnown RBP15.58■□□□□ 0.09
NEDD1-213ENST00000557644 MRPS21P82921 87 aaKnown RBP15.58■□□□□ 0.09
NEDD1-213ENST00000557644 RETSATQ6NUM9 610 aa15.58■□□□□ 0.09
NEDD1-213ENST00000557644 SERPINA13PQ6UXR4 307 aa15.58■□□□□ 0.09
NEDD1-213ENST00000557644 SH2D3CQ8N5H7 860 aa15.58■□□□□ 0.09
NEDD1-213ENST00000557644 PBKQ96KB5 322 aa15.58■□□□□ 0.09
NEDD1-213ENST00000557644 TMEM245Q9H330 911 aa15.58■□□□□ 0.09
NEDD1-213ENST00000557644 C11orf16Q9NQ32 467 aa15.58■□□□□ 0.09
NEDD1-213ENST00000557644 RAD54BQ9Y620 910 aa15.58■□□□□ 0.09
NEDD1-213ENST00000557644 STON1Q9Y6Q2 735 aa15.58■□□□□ 0.09
NEDD1-213ENST00000557644 NCAM2O15394 837 aa15.58■□□□□ 0.08
NEDD1-213ENST00000557644 SRPRAP08240 638 aaKnown RBP15.58■□□□□ 0.08
NEDD1-213ENST00000557644 AOC1P19801 751 aa15.58■□□□□ 0.08
NEDD1-213ENST00000557644 MX2P20592 715 aa15.58■□□□□ 0.08
NEDD1-213ENST00000557644 ACCSLQ4AC99 568 aa15.58■□□□□ 0.08
NEDD1-213ENST00000557644 SYNPOQ8N3V7 929 aa15.58■□□□□ 0.08
NEDD1-213ENST00000557644 ATG4AQ8WYN0 398 aa15.58■□□□□ 0.08
NEDD1-213ENST00000557644 HDAC11Q96DB2 347 aa15.58■□□□□ 0.08
NEDD1-213ENST00000557644 ZNF419Q96HQ0 510 aaPredicted RBP15.58■□□□□ 0.08
NEDD1-213ENST00000557644 DLGAP2Q9P1A6 1054 aa15.58■□□□□ 0.08
NEDD1-213ENST00000557644 NTSR1P30989 418 aa15.57■□□□□ 0.08
NEDD1-213ENST00000557644 ST8SIA6P61647 398 aa15.57■□□□□ 0.08
NEDD1-213ENST00000557644 IL10RBQ08334 325 aa15.57■□□□□ 0.08
NEDD1-213ENST00000557644 AP1B1Q10567 949 aa15.57■□□□□ 0.08
NEDD1-213ENST00000557644 PDK1Q15118 436 aa15.57■□□□□ 0.08
NEDD1-213ENST00000557644 NOMO1Q15155 1222 aa15.57■□□□□ 0.08
NEDD1-213ENST00000557644 SIX1Q15475 284 aaPredicted RBP15.57■□□□□ 0.08
NEDD1-213ENST00000557644 DLG2Q15700 870 aa15.57■□□□□ 0.08
NEDD1-213ENST00000557644 LONRF2Q1L5Z9 754 aa15.57■□□□□ 0.08
NEDD1-213ENST00000557644 RASGEF1CQ8N431 466 aa15.57■□□□□ 0.08
NEDD1-213ENST00000557644 FRS2Q8WU20 508 aa15.57■□□□□ 0.08
NEDD1-213ENST00000557644 CHRDQ9H2X0 955 aa15.57■□□□□ 0.08
NEDD1-213ENST00000557644 UBA2Q9UBT2 640 aaPredicted RBP15.57■□□□□ 0.08
NEDD1-213ENST00000557644 SAR1BQ9Y6B6 198 aa15.57■□□□□ 0.08
NEDD1-213ENST00000557644 KCNK1O00180 336 aa15.57■□□□□ 0.08
NEDD1-213ENST00000557644 ZNF821O75541 412 aaPredicted RBP15.57■□□□□ 0.08
NEDD1-213ENST00000557644 TMCC1O94876 653 aa15.57■□□□□ 0.08
NEDD1-213ENST00000557644 TCP1P17987 556 aaKnown RBP15.57■□□□□ 0.08
NEDD1-213ENST00000557644 PPIDQ08752 370 aaKnown RBP15.57■□□□□ 0.08
NEDD1-213ENST00000557644 SLC10A7Q0GE19 358 aa15.57■□□□□ 0.08
NEDD1-213ENST00000557644 MTAPQ13126 283 aa15.57■□□□□ 0.08
NEDD1-213ENST00000557644 ENPP2Q13822 863 aa15.57■□□□□ 0.08
NEDD1-213ENST00000557644 KIAA1211LQ6NV74 962 aa15.57■□□□□ 0.08
NEDD1-213ENST00000557644 KCNV2Q8TDN2 545 aa15.57■□□□□ 0.08
NEDD1-213ENST00000557644 CAPZA3Q96KX2 299 aa15.57■□□□□ 0.08
NEDD1-213ENST00000557644 TNKS2Q9H2K2 1166 aa15.57■□□□□ 0.08
NEDD1-213ENST00000557644 MUC22E2RYF6 1773 aaPredicted RBP15.57■□□□□ 0.08
NEDD1-213ENST00000557644 ZSCAN5CA6NGD5 496 aaPredicted RBP15.56■□□□□ 0.08
NEDD1-213ENST00000557644 ATP9BO43861 1147 aa15.56■□□□□ 0.08
NEDD1-213ENST00000557644 BNIP3LO60238 219 aa15.56■□□□□ 0.08
NEDD1-213ENST00000557644 EPHX1P07099 455 aa15.56■□□□□ 0.08
NEDD1-213ENST00000557644 RPS9P46781 194 aaKnown RBP15.56■□□□□ 0.08
NEDD1-213ENST00000557644 Q6ZVU0 165 aa15.56■□□□□ 0.08
NEDD1-213ENST00000557644 LRRC49Q8IUZ0 686 aa15.56■□□□□ 0.08
NEDD1-213ENST00000557644 TMEM105Q8N8V8 129 aa15.56■□□□□ 0.08
NEDD1-213ENST00000557644 C1orf54Q8WWF1 131 aa15.56■□□□□ 0.08
NEDD1-213ENST00000557644 ZNF592Q92610 1267 aa15.56■□□□□ 0.08
NEDD1-213ENST00000557644 TSGA13Q96PP4 275 aa15.56■□□□□ 0.08
NEDD1-213ENST00000557644 PPP1R12AO14974 1030 aaPredicted RBP15.56■□□□□ 0.08
NEDD1-213ENST00000557644 PRLRP16471 622 aa15.56■□□□□ 0.08
NEDD1-213ENST00000557644 COL9A1P20849 921 aa15.56■□□□□ 0.08
NEDD1-213ENST00000557644 CCNCP24863 283 aa15.56■□□□□ 0.08
NEDD1-213ENST00000557644 NNMTP40261 264 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms