RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 IQCA1Q86XH1 822 aa5.04□□□□□ -1.6
ATXN3-246ENST00000557030 ATG4AQ8WYN0 398 aa5.04□□□□□ -1.6
ATXN3-246ENST00000557030 CELF1Q92879 486 aaKnown RBP5.04□□□□□ -1.6
ATXN3-246ENST00000557030 SECISBP2LQ93073 1101 aaKnown RBP5.04□□□□□ -1.6
ATXN3-246ENST00000557030 DHTKD1Q96HY7 919 aaPredicted RBP5.04□□□□□ -1.6
ATXN3-246ENST00000557030 EPSTI1Q96J88 318 aa5.04□□□□□ -1.6
ATXN3-246ENST00000557030 FAM84BQ96KN1 310 aaPredicted RBP5.04□□□□□ -1.6
ATXN3-246ENST00000557030 ALS2CR12Q96Q35 445 aa5.04□□□□□ -1.6
ATXN3-246ENST00000557030 SELENOOQ9BVL4 669 aa5.04□□□□□ -1.6
ATXN3-246ENST00000557030 CAPS2Q9BXY5 557 aa5.04□□□□□ -1.6
ATXN3-246ENST00000557030 DPH1Q9BZG8 443 aa5.04□□□□□ -1.6
ATXN3-246ENST00000557030 INO80BQ9C086 356 aaPredicted RBP5.04□□□□□ -1.6
ATXN3-246ENST00000557030 LRRC27Q9C0I9 530 aa5.04□□□□□ -1.6
ATXN3-246ENST00000557030 ZNF700Q9H0M5 742 aa5.04□□□□□ -1.6
ATXN3-246ENST00000557030 VPS16Q9H269 839 aa5.04□□□□□ -1.6
ATXN3-246ENST00000557030 CXorf36Q9H7Y0 433 aa5.04□□□□□ -1.6
ATXN3-246ENST00000557030 CPNE5Q9HCH3 593 aa5.04□□□□□ -1.6
ATXN3-246ENST00000557030 SH3GLB2Q9NR46 395 aa5.04□□□□□ -1.6
ATXN3-246ENST00000557030 TAB2Q9NYJ8 693 aa5.04□□□□□ -1.6
ATXN3-246ENST00000557030 RNF14Q9UBS8 474 aa5.04□□□□□ -1.6
ATXN3-246ENST00000557030 SRP68Q9UHB9 627 aaKnown RBP5.04□□□□□ -1.6
ATXN3-246ENST00000557030 OGDHLQ9ULD0 1010 aa5.04□□□□□ -1.6
ATXN3-246ENST00000557030 SLC4A4Q9Y6R1 1079 aa5.04□□□□□ -1.6
ATXN3-246ENST00000557030 SCN7AQ01118 1682 aa5.04□□□□□ -1.6
ATXN3-246ENST00000557030 THSD7AQ9UPZ6 1657 aa5.04□□□□□ -1.6
ATXN3-246ENST00000557030 ECM29Q5VYK3 1845 aa5.04□□□□□ -1.6
ATXN3-246ENST00000557030 COL24A1Q17RW2 1714 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 TAF1P21675 1872 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 CACNA1SQ13698 1873 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 TTC26A0AVF1 554 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 PMM2O15305 246 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 CREB3O43889 395 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 HSF2BPO75031 334 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 FGFR1OPO95684 399 aaKnown RBP5.03□□□□□ -1.6
ATXN3-246ENST00000557030 TTLL1O95922 423 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 ATP1A1P05023 1023 aaKnown RBP5.03□□□□□ -1.6
ATXN3-246ENST00000557030 CYP2C9P11712 490 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 IDEP14735 1019 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 TRIM21P19474 475 aaKnown RBP5.03□□□□□ -1.6
ATXN3-246ENST00000557030 GPD1P21695 349 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 DRD4P21917 467 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 KLRK1P26718 216 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 PPIFP30405 207 aaKnown RBP5.03□□□□□ -1.6
ATXN3-246ENST00000557030 TM4SF1P30408 202 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 LRPAP1P30533 357 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 KIF5BP33176 963 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 STAT6P42226 847 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 PAFAH1B1P43034 410 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 PRKAG1P54619 331 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 DYNLL1P63167 89 aaKnown RBP5.03□□□□□ -1.6
ATXN3-246ENST00000557030 TFF2Q03403 129 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 MYO1EQ12965 1108 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 BMPR2Q13873 1038 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 POLD3Q15054 466 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-246ENST00000557030 CNGA2Q16280 664 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 MGAT5BQ3V5L5 792 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 PLA1AQ53H76 456 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 GALNT17Q6IS24 598 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 TMTC3Q6ZXV5 915 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 USP49Q70CQ1 688 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 ANKRD18AQ8IVF6 992 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 ADSSL1Q8N142 457 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 MIGA1Q8NAN2 632 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 C1orf131Q8NDD1 294 aaKnown RBP5.03□□□□□ -1.6
ATXN3-246ENST00000557030 OR56A3Q8NH54 315 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 AENQ8WTP8 325 aaKnown RBP5.03□□□□□ -1.6
ATXN3-246ENST00000557030 ATRIPQ8WXE1 791 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.03□□□□□ -1.6
ATXN3-246ENST00000557030 DPF1Q92782 380 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 MMS19Q96T76 1030 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 MYCBPQ99417 103 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-246ENST00000557030 SH3GL2Q99962 352 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 NCAPGQ9BPX3 1015 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 MESP1Q9BRJ9 268 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 RIOK1Q9BRS2 568 aaKnown RBP5.03□□□□□ -1.6
ATXN3-246ENST00000557030 SYT17Q9BSW7 474 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 BRIP1Q9BX63 1249 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 EDEM3Q9BZQ6 932 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 ZNF518BQ9C0D4 1074 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 ZNF287Q9HBT7 754 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 EXOC1Q9NV70 894 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 ZSCAN32Q9NX65 697 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 VPS54Q9P1Q0 977 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 NARFQ9UHQ1 456 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 SNX12Q9UMY4 172 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 HYOU1Q9Y4L1 999 aa5.03□□□□□ -1.6
ATXN3-246ENST00000557030 NHSQ6T4R5 1651 aa5.02□□□□□ -1.61
ATXN3-246ENST00000557030 ABCB11O95342 1321 aa5.02□□□□□ -1.61
ATXN3-246ENST00000557030 CYP2D7A0A087X1C5 515 aa5.02□□□□□ -1.61
ATXN3-246ENST00000557030 A0A0U1RQJ8 604 aa5.02□□□□□ -1.61
ATXN3-246ENST00000557030 PES1O00541 588 aaKnown RBP5.02□□□□□ -1.61
ATXN3-246ENST00000557030 EIF3HO15372 352 aaKnown RBP eCLIP5.02□□□□□ -1.61
ATXN3-246ENST00000557030 SLC16A3O15427 465 aaKnown RBP5.02□□□□□ -1.61
ATXN3-246ENST00000557030 RASSF9O75901 435 aa5.02□□□□□ -1.61
ATXN3-246ENST00000557030 FESP07332 822 aa5.02□□□□□ -1.61
ATXN3-246ENST00000557030 MYF5P13349 255 aa5.02□□□□□ -1.61
ATXN3-246ENST00000557030 SCG2P13521 617 aa5.02□□□□□ -1.61
ATXN3-246ENST00000557030 CCNE1P24864 410 aa5.02□□□□□ -1.61
ATXN3-246ENST00000557030 ADORA2AP29274 412 aa5.02□□□□□ -1.61
ATXN3-246ENST00000557030 HNRNPH3P31942 346 aaKnown RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms