RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 RPRD1AQ96P16 312 aaPredicted RBP9.27□□□□□ -0.93
HNRNPC-227ENST00000556897 TSG101Q99816 390 aa9.27□□□□□ -0.93
HNRNPC-227ENST00000556897 FEM1AQ9BSK4 669 aa9.27□□□□□ -0.93
HNRNPC-227ENST00000556897 TRIM62Q9BVG3 475 aa9.27□□□□□ -0.93
HNRNPC-227ENST00000556897 DPH1Q9BZG8 443 aa9.27□□□□□ -0.93
HNRNPC-227ENST00000556897 GOLPH3LQ9H4A5 285 aa9.27□□□□□ -0.93
HNRNPC-227ENST00000556897 FAM204AQ9H8W3 233 aa9.27□□□□□ -0.93
HNRNPC-227ENST00000556897 POPDC2Q9HBU9 364 aa9.27□□□□□ -0.93
HNRNPC-227ENST00000556897 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.27□□□□□ -0.93
HNRNPC-227ENST00000556897 DNAJC28Q9NX36 388 aa9.27□□□□□ -0.93
HNRNPC-227ENST00000556897 AHCTF1Q8WYP5 2266 aa9.27□□□□□ -0.93
HNRNPC-227ENST00000556897 PTPN13Q12923 2485 aa9.27□□□□□ -0.93
HNRNPC-227ENST00000556897 KIF26BQ2KJY2 2108 aa9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 RP1P56715 2156 aa9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 SYNJ2BP-COX16A0A087WUM0 186 aa9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 PMS2P1A4D2B8 440 aa9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 TRIM49BA6NDI0 452 aa9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 K7ENP7 123 aa9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 RNF103O00237 685 aa9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 KPNA3O00505 521 aaPredicted RBP9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 SCAMP1O15126 338 aa9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 ARHGAP6O43182 974 aa9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 ZNF202O95125 648 aa9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 PCDH8O95206 1070 aa9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 MT-CO1P00395 513 aa9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 TGM2P21980 687 aa9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 HNRNPA2B1P22626 353 aaKnown RBP9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 RBMS1P29558 406 aaKnown RBP9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 GGCXP38435 758 aa9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 DUSP3P51452 185 aaPredicted RBP9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 OXCT1P55809 520 aa9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 YWHAZP63104 245 aaKnown RBP9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 EIF4EBP2Q13542 120 aaPredicted RBP9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 TAF5Q15542 800 aa9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 CDKN3Q16667 212 aa9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 OR6B2Q6IFH4 312 aa9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 NEK5Q6P3R8 708 aa9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 DENND1BQ6P3S1 775 aa9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 INO80CQ6PI98 192 aaPredicted RBP9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 GCNT7Q6ZNI0 430 aa9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 Q6ZSR6 202 aa9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 PTAR1Q7Z6K3 402 aaPredicted RBP9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 ABI3BPQ7Z7G0 1075 aa9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 SH2D3CQ8N5H7 860 aa9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 ATP6V0D2Q8N8Y2 350 aa9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 ZNF548Q8NEK5 533 aaPredicted RBP9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 IFI44Q8TCB0 444 aa9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 SNX21Q969T3 373 aa9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 ARRDC3Q96B67 414 aa9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 SLC46A1Q96NT5 459 aa9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 PPP1R9BQ96SB3 815 aa9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 DUSP23Q9BVJ7 150 aa9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 SLC4A5Q9BY07 1137 aa9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 USP29Q9HBJ7 922 aa9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 EVA1BQ9NVM1 165 aa9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 DDIT4Q9NX09 232 aa9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 COX16Q9P0S2 106 aa9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 SLC12A6Q9UHW9 1150 aa9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 VPS28Q9UK41 221 aa9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 VANGL2Q9ULK5 521 aa9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 OR51B4Q9Y5P0 310 aa9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 TRPM6Q9BX84 2022 aa9.26□□□□□ -0.93
HNRNPC-227ENST00000556897 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.25□□□□□ -0.93
HNRNPC-227ENST00000556897 CPED1A4D0V7 1026 aa9.25□□□□□ -0.93
HNRNPC-227ENST00000556897 E5RJQ4 531 aa9.25□□□□□ -0.93
HNRNPC-227ENST00000556897 K7ERQ8 282 aa9.25□□□□□ -0.93
HNRNPC-227ENST00000556897 LZTS3O60299 673 aaPredicted RBP9.25□□□□□ -0.93
HNRNPC-227ENST00000556897 WISP1O95388 367 aa9.25□□□□□ -0.93
HNRNPC-227ENST00000556897 SLC2A3P11169 496 aa9.25□□□□□ -0.93
HNRNPC-227ENST00000556897 SRCP12931 536 aa9.25□□□□□ -0.93
HNRNPC-227ENST00000556897 NME1P15531 152 aaKnown RBP9.25□□□□□ -0.93
HNRNPC-227ENST00000556897 CCR1P32246 355 aa9.25□□□□□ -0.93
HNRNPC-227ENST00000556897 CHRNA3P32297 505 aa9.25□□□□□ -0.93
HNRNPC-227ENST00000556897 ACADSBP45954 432 aa9.25□□□□□ -0.93
HNRNPC-227ENST00000556897 HNRNPKP61978 463 aaKnown RBP eCLIP9.25□□□□□ -0.93
HNRNPC-227ENST00000556897 KRT85P78386 507 aa9.25□□□□□ -0.93
HNRNPC-227ENST00000556897 CCDC15Q0P6D6 951 aa9.25□□□□□ -0.93
HNRNPC-227ENST00000556897 ZNF177Q13360 481 aaPredicted RBP9.25□□□□□ -0.93
HNRNPC-227ENST00000556897 PNOCQ13519 176 aa9.25□□□□□ -0.93
HNRNPC-227ENST00000556897 AUHQ13825 339 aaKnown RBP9.25□□□□□ -0.93
HNRNPC-227ENST00000556897 ZCCHC8Q6NZY4 707 aaKnown RBP9.25□□□□□ -0.93
HNRNPC-227ENST00000556897 GUSBP11Q6P575 273 aa9.25□□□□□ -0.93
HNRNPC-227ENST00000556897 FOXR1Q6PIV2 292 aa9.25□□□□□ -0.93
HNRNPC-227ENST00000556897 IGF2-ASQ6U949 168 aa9.25□□□□□ -0.93
HNRNPC-227ENST00000556897 CRTC1Q6UUV9 634 aa9.25□□□□□ -0.93
HNRNPC-227ENST00000556897 PRICKLE2Q7Z3G6 844 aa9.25□□□□□ -0.93
HNRNPC-227ENST00000556897 TMEM110Q86TL2 294 aa9.25□□□□□ -0.93
HNRNPC-227ENST00000556897 ARHGEF19Q8IW93 802 aa9.25□□□□□ -0.93
HNRNPC-227ENST00000556897 ATP11CQ8NB49 1132 aa9.25□□□□□ -0.93
HNRNPC-227ENST00000556897 OR2A12Q8NGT7 310 aa9.25□□□□□ -0.93
HNRNPC-227ENST00000556897 LMO3Q8TAP4 145 aa9.25□□□□□ -0.93
HNRNPC-227ENST00000556897 GRIN3AQ8TCU5 1115 aa9.25□□□□□ -0.93
HNRNPC-227ENST00000556897 STK32AQ8WU08 396 aa9.25□□□□□ -0.93
HNRNPC-227ENST00000556897 RNF34Q969K3 372 aa9.25□□□□□ -0.93
HNRNPC-227ENST00000556897 IFT43Q96FT9 208 aa9.25□□□□□ -0.93
HNRNPC-227ENST00000556897 MS4A3Q96HJ5 214 aa9.25□□□□□ -0.93
HNRNPC-227ENST00000556897 MED15Q96RN5 788 aa9.25□□□□□ -0.93
HNRNPC-227ENST00000556897 MUC3BQ9H195 1237 aa9.25□□□□□ -0.93
HNRNPC-227ENST00000556897 THAP9Q9H5L6 903 aa9.25□□□□□ -0.93
HNRNPC-227ENST00000556897 METTL14Q9HCE5 456 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms