RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 PCED1AQ9H1Q7 454 aa23.37■■□□□ 1.33
TDP1-216ENST00000556867 NOL6Q9H6R4 1146 aaKnown RBP23.37■■□□□ 1.33
TDP1-216ENST00000556867 SPTLC3Q9NUV7 552 aa23.37■■□□□ 1.33
TDP1-216ENST00000556867 EEF2KO00418 725 aaKnown RBP23.36■■□□□ 1.33
TDP1-216ENST00000556867 MID1O15344 667 aa23.36■■□□□ 1.33
TDP1-216ENST00000556867 SMAD6O43541 496 aaKnown RBP23.36■■□□□ 1.33
TDP1-216ENST00000556867 ADH1BP00325 375 aa23.36■■□□□ 1.33
TDP1-216ENST00000556867 TMEM253P0C7T8 217 aa23.36■■□□□ 1.33
TDP1-216ENST00000556867 IL1R2P27930 398 aa23.36■■□□□ 1.33
TDP1-216ENST00000556867 HOXD12P35452 270 aa23.36■■□□□ 1.33
TDP1-216ENST00000556867 PSMD8P48556 350 aa23.36■■□□□ 1.33
TDP1-216ENST00000556867 SFSWAPQ12872 951 aaKnown RBP23.36■■□□□ 1.33
TDP1-216ENST00000556867 POLD3Q15054 466 aaPredicted RBP23.36■■□□□ 1.33
TDP1-216ENST00000556867 BOLA3Q53S33 107 aa23.36■■□□□ 1.33
TDP1-216ENST00000556867 C22orf39Q6P5X5 142 aa23.36■■□□□ 1.33
TDP1-216ENST00000556867 FAM124AQ86V42 546 aa23.36■■□□□ 1.33
TDP1-216ENST00000556867 SYT12Q8IV01 421 aa23.36■■□□□ 1.33
TDP1-216ENST00000556867 UMODL1-AS1Q8N2C9 162 aa23.36■■□□□ 1.33
TDP1-216ENST00000556867 DEFB119Q8N690 84 aa23.36■■□□□ 1.33
TDP1-216ENST00000556867 PIGKQ92643 395 aa23.36■■□□□ 1.33
TDP1-216ENST00000556867 CEP44Q9C0F1 390 aa23.36■■□□□ 1.33
TDP1-216ENST00000556867 DONSONQ9NYP3 566 aa23.36■■□□□ 1.33
TDP1-216ENST00000556867 CTTNBP2NLQ9P2B4 639 aa23.36■■□□□ 1.33
TDP1-216ENST00000556867 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.36■■□□□ 1.33
TDP1-216ENST00000556867 MCF2LO15068 1137 aa23.35■■□□□ 1.33
TDP1-216ENST00000556867 TCF4P15884 667 aa23.35■■□□□ 1.33
TDP1-216ENST00000556867 C5AR1P21730 350 aa23.35■■□□□ 1.33
TDP1-216ENST00000556867 ITPKAP23677 461 aa23.35■■□□□ 1.33
TDP1-216ENST00000556867 SLC8A1P32418 973 aa23.35■■□□□ 1.33
TDP1-216ENST00000556867 GEMIN4P57678 1058 aaKnown RBP23.35■■□□□ 1.33
TDP1-216ENST00000556867 YBEYP58557 167 aaPredicted RBP23.35■■□□□ 1.33
TDP1-216ENST00000556867 SF3A2Q15428 464 aaKnown RBP23.35■■□□□ 1.33
TDP1-216ENST00000556867 DPYSL2Q16555 572 aa23.35■■□□□ 1.33
TDP1-216ENST00000556867 RFX8Q6ZV50 586 aa23.35■■□□□ 1.33
TDP1-216ENST00000556867 CCDC114Q96M63 670 aa23.35■■□□□ 1.33
TDP1-216ENST00000556867 BTBD1Q9H0C5 482 aa23.35■■□□□ 1.33
TDP1-216ENST00000556867 SMOC1Q9H4F8 434 aa23.35■■□□□ 1.33
TDP1-216ENST00000556867 SGK2Q9HBY8 427 aa23.35■■□□□ 1.33
TDP1-216ENST00000556867 FBXL12Q9NXK8 326 aa23.35■■□□□ 1.33
TDP1-216ENST00000556867 LCMT1Q9UIC8 334 aa23.35■■□□□ 1.33
TDP1-216ENST00000556867 PILRBQ9UKJ0 227 aa23.35■■□□□ 1.33
TDP1-216ENST00000556867 HPCAL4Q9UM19 191 aa23.35■■□□□ 1.33
TDP1-216ENST00000556867 NCKAP1Q9Y2A7 1128 aa23.35■■□□□ 1.33
TDP1-216ENST00000556867 CD160O95971 181 aa23.34■■□□□ 1.33
TDP1-216ENST00000556867 IL1BP01584 269 aa23.34■■□□□ 1.33
TDP1-216ENST00000556867 GOT1P17174 413 aa23.34■■□□□ 1.33
TDP1-216ENST00000556867 ACSL1P33121 698 aa23.34■■□□□ 1.33
TDP1-216ENST00000556867 HCAR3P49019 387 aa23.34■■□□□ 1.33
TDP1-216ENST00000556867 SLC25A11Q02978 314 aaKnown RBP23.34■■□□□ 1.33
TDP1-216ENST00000556867 PARP15Q460N3 678 aa23.34■■□□□ 1.33
TDP1-216ENST00000556867 PPP6R3Q5H9R7 873 aaPredicted RBP23.34■■□□□ 1.33
TDP1-216ENST00000556867 C12orf50Q8NA57 414 aaPredicted RBP23.34■■□□□ 1.33
TDP1-216ENST00000556867 OR2A12Q8NGT7 310 aa23.34■■□□□ 1.33
TDP1-216ENST00000556867 TEKT4Q8WW24 435 aa23.34■■□□□ 1.33
TDP1-216ENST00000556867 ANP32EQ9BTT0 268 aa23.34■■□□□ 1.33
TDP1-216ENST00000556867 SERGEFQ9UGK8 458 aa23.34■■□□□ 1.33
TDP1-216ENST00000556867 PPM1HQ9ULR3 514 aa23.34■■□□□ 1.33
TDP1-216ENST00000556867 FZD4Q9ULV1 537 aa23.34■■□□□ 1.33
TDP1-216ENST00000556867 A0A1W2PP55 124 aa23.33■■□□□ 1.33
TDP1-216ENST00000556867 ZSCAN5CA6NGD5 496 aaPredicted RBP23.33■■□□□ 1.33
TDP1-216ENST00000556867 PRR5-ARHGAP8B1AHC4 643 aa23.33■■□□□ 1.33
TDP1-216ENST00000556867 KDELR3O43731 214 aa23.33■■□□□ 1.33
TDP1-216ENST00000556867 ZNF821O75541 412 aaPredicted RBP23.33■■□□□ 1.33
TDP1-216ENST00000556867 PROSCO94903 275 aa23.33■■□□□ 1.33
TDP1-216ENST00000556867 ARHGAP8P85298 464 aa23.33■■□□□ 1.33
TDP1-216ENST00000556867 SMTNL2Q2TAL5 461 aa23.33■■□□□ 1.33
TDP1-216ENST00000556867 KCNT1Q5JUK3 1230 aa23.33■■□□□ 1.33
TDP1-216ENST00000556867 SYCP2LQ5T4T6 812 aa23.33■■□□□ 1.33
TDP1-216ENST00000556867 AADATQ8N5Z0 425 aa23.33■■□□□ 1.33
TDP1-216ENST00000556867 PCDH20Q8N6Y1 951 aaKnown RBP23.33■■□□□ 1.33
TDP1-216ENST00000556867 GANCQ8TET4 914 aa23.33■■□□□ 1.33
TDP1-216ENST00000556867 ISG20Q96AZ6 181 aaKnown RBP23.33■■□□□ 1.33
TDP1-216ENST00000556867 HMCESQ96FZ2 354 aa23.33■■□□□ 1.33
TDP1-216ENST00000556867 ZWILCHQ9H900 591 aa23.33■■□□□ 1.33
TDP1-216ENST00000556867 TMEM74BQ9NUR3 256 aa23.33■■□□□ 1.33
TDP1-216ENST00000556867 CWC15Q9P013 229 aaKnown RBP23.33■■□□□ 1.33
TDP1-216ENST00000556867 EVLQ9UI08 416 aaPredicted RBP23.33■■□□□ 1.33
TDP1-216ENST00000556867 FARP1Q9Y4F1 1045 aaPredicted RBP23.33■■□□□ 1.33
TDP1-216ENST00000556867 ATXN2Q99700 1313 aaKnown RBP23.33■■□□□ 1.32
TDP1-216ENST00000556867 METTL12A8MUP2 240 aa23.32■■□□□ 1.32
TDP1-216ENST00000556867 MEI4A8MW99 385 aa23.32■■□□□ 1.32
TDP1-216ENST00000556867 RASA4BC9J798 803 aa23.32■■□□□ 1.32
TDP1-216ENST00000556867 C1QTNF3-AMACRE9PGA6 284 aa23.32■■□□□ 1.32
TDP1-216ENST00000556867 RASA4O43374 803 aa23.32■■□□□ 1.32
TDP1-216ENST00000556867 BNIP3LO60238 219 aa23.32■■□□□ 1.32
TDP1-216ENST00000556867 SEMA4FO95754 770 aa23.32■■□□□ 1.32
TDP1-216ENST00000556867 RARAP10276 462 aa23.32■■□□□ 1.32
TDP1-216ENST00000556867 NDST2P52849 883 aa23.32■■□□□ 1.32
TDP1-216ENST00000556867 SERINC3Q13530 473 aa23.32■■□□□ 1.32
TDP1-216ENST00000556867 DPYSQ14117 519 aa23.32■■□□□ 1.32
TDP1-216ENST00000556867 WDR45BQ5MNZ6 344 aa23.32■■□□□ 1.32
TDP1-216ENST00000556867 FAM46CQ5VWP2 391 aa23.32■■□□□ 1.32
TDP1-216ENST00000556867 TXNRD3NBQ6F5E7 133 aa23.32■■□□□ 1.32
TDP1-216ENST00000556867 TCEAL6Q6IPX3 200 aa23.32■■□□□ 1.32
TDP1-216ENST00000556867 DNASE2BQ8WZ79 361 aa23.32■■□□□ 1.32
TDP1-216ENST00000556867 TCEAL3Q969E4 200 aa23.32■■□□□ 1.32
TDP1-216ENST00000556867 FAM131CQ96AQ9 280 aa23.32■■□□□ 1.32
TDP1-216ENST00000556867 PANX2Q96RD6 677 aa23.32■■□□□ 1.32
TDP1-216ENST00000556867 OMDQ99983 421 aa23.32■■□□□ 1.32
TDP1-216ENST00000556867 TNKS2Q9H2K2 1166 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms