RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 TJP2Q9UDY2 1190 aa8.72□□□□□ -1.01
MARK3-210ENST00000556463 AGTPBP1Q9UPW5 1226 aa8.72□□□□□ -1.01
MARK3-210ENST00000556463 ANKRD34BA5PLL1 514 aa8.72□□□□□ -1.01
MARK3-210ENST00000556463 KRT3P12035 628 aa8.72□□□□□ -1.01
MARK3-210ENST00000556463 TNNI1P19237 187 aa8.72□□□□□ -1.01
MARK3-210ENST00000556463 JAK1P23458 1154 aa8.72□□□□□ -1.01
MARK3-210ENST00000556463 ASPAP45381 313 aa8.72□□□□□ -1.01
MARK3-210ENST00000556463 TGFB2P61812 414 aa8.72□□□□□ -1.01
MARK3-210ENST00000556463 MRPS22P82650 360 aaKnown RBP8.72□□□□□ -1.01
MARK3-210ENST00000556463 HADHQ16836 314 aaKnown RBP8.72□□□□□ -1.01
MARK3-210ENST00000556463 DOK7Q18PE1 504 aa8.72□□□□□ -1.01
MARK3-210ENST00000556463 FAM47CQ5HY64 1035 aa8.72□□□□□ -1.01
MARK3-210ENST00000556463 CYP4A22Q5TCH4 519 aa8.72□□□□□ -1.01
MARK3-210ENST00000556463 UBE2UQ5VVX9 321 aa8.72□□□□□ -1.01
MARK3-210ENST00000556463 SNRNP48Q6IEG0 339 aaKnown RBP8.72□□□□□ -1.01
MARK3-210ENST00000556463 DARS2Q6PI48 645 aaKnown RBP8.72□□□□□ -1.01
MARK3-210ENST00000556463 NPNTQ6UXI9 565 aa8.72□□□□□ -1.01
MARK3-210ENST00000556463 PLD5Q8N7P1 536 aa8.72□□□□□ -1.01
MARK3-210ENST00000556463 HTRA1Q92743 480 aa8.72□□□□□ -1.01
MARK3-210ENST00000556463 IMPG2Q9BZV3 1241 aa8.72□□□□□ -1.01
MARK3-210ENST00000556463 PNPOQ9NVS9 261 aa8.72□□□□□ -1.01
MARK3-210ENST00000556463 CDH7Q9ULB5 785 aa8.72□□□□□ -1.01
MARK3-210ENST00000556463 PTPRFP10586 1907 aa8.72□□□□□ -1.01
MARK3-210ENST00000556463 H3BUI4 141 aa8.72□□□□□ -1.01
MARK3-210ENST00000556463 ZNF701M0R085 212 aaPredicted RBP8.72□□□□□ -1.01
MARK3-210ENST00000556463 TOM1L1O75674 476 aa8.72□□□□□ -1.01
MARK3-210ENST00000556463 RPL10P27635 214 aaKnown RBP8.72□□□□□ -1.01
MARK3-210ENST00000556463 SOX11P35716 441 aa8.72□□□□□ -1.01
MARK3-210ENST00000556463 ACOT2P49753 483 aa8.72□□□□□ -1.01
MARK3-210ENST00000556463 AP3M2P53677 418 aa8.72□□□□□ -1.01
MARK3-210ENST00000556463 TUBA1BP68363 451 aa8.72□□□□□ -1.01
MARK3-210ENST00000556463 SLC10A2Q12908 348 aaPredicted RBP8.72□□□□□ -1.01
MARK3-210ENST00000556463 KLF10Q13118 480 aa8.72□□□□□ -1.01
MARK3-210ENST00000556463 RFTN1Q14699 578 aaPredicted RBP8.72□□□□□ -1.01
MARK3-210ENST00000556463 FAM214AQ32MH5 1076 aa8.72□□□□□ -1.01
MARK3-210ENST00000556463 IRAK1BP1Q5VVH5 260 aa8.72□□□□□ -1.01
MARK3-210ENST00000556463 DENND1BQ6P3S1 775 aa8.72□□□□□ -1.01
MARK3-210ENST00000556463 C4orf22Q6V702 233 aa8.72□□□□□ -1.01
MARK3-210ENST00000556463 TUBA1AQ71U36 451 aa8.72□□□□□ -1.01
MARK3-210ENST00000556463 FAM20CQ8IXL6 584 aa8.72□□□□□ -1.01
MARK3-210ENST00000556463 PQLC3Q8N755 202 aa8.72□□□□□ -1.01
MARK3-210ENST00000556463 TRPC4APQ8TEL6 797 aa8.72□□□□□ -1.01
MARK3-210ENST00000556463 CFAP36Q96G28 342 aa8.72□□□□□ -1.01
MARK3-210ENST00000556463 XYLT2Q9H1B5 865 aa8.72□□□□□ -1.01
MARK3-210ENST00000556463 RPAP3Q9H6T3 665 aaPredicted RBP8.72□□□□□ -1.01
MARK3-210ENST00000556463 POLE4Q9NR33 117 aa8.72□□□□□ -1.01
MARK3-210ENST00000556463 CISHQ9NSE2 258 aa8.72□□□□□ -1.01
MARK3-210ENST00000556463 RBAKQ9NYW8 714 aaPredicted RBP8.72□□□□□ -1.01
MARK3-210ENST00000556463 PCDHB12Q9Y5F1 795 aa8.72□□□□□ -1.01
MARK3-210ENST00000556463 SQORQ9Y6N5 450 aa8.72□□□□□ -1.01
MARK3-210ENST00000556463 LOC285556D6RIA3 1793 aa8.72□□□□□ -1.01
MARK3-210ENST00000556463 GOLGA8CPA6NN73 597 aa8.71□□□□□ -1.01
MARK3-210ENST00000556463 FAM47E-STBD1D6RA91 191 aa8.71□□□□□ -1.01
MARK3-210ENST00000556463 TMX2-CTNND1H3BSU7 103 aa8.71□□□□□ -1.01
MARK3-210ENST00000556463 PSMD12O00232 456 aaPredicted RBP8.71□□□□□ -1.01
MARK3-210ENST00000556463 BCAS2O75934 225 aaPredicted RBP8.71□□□□□ -1.01
MARK3-210ENST00000556463 KRT8P05787 483 aa8.71□□□□□ -1.01
MARK3-210ENST00000556463 THRAP10827 490 aa8.71□□□□□ -1.01
MARK3-210ENST00000556463 CHRNB1P11230 501 aa8.71□□□□□ -1.01
MARK3-210ENST00000556463 PSMC3P17980 439 aa8.71□□□□□ -1.01
MARK3-210ENST00000556463 TCF7P36402 384 aaPredicted RBP8.71□□□□□ -1.01
MARK3-210ENST00000556463 TRPC1P48995 793 aa8.71□□□□□ -1.01
MARK3-210ENST00000556463 KCNC4Q03721 635 aa8.71□□□□□ -1.01
MARK3-210ENST00000556463 ARL13BQ3SXY8 428 aa8.71□□□□□ -1.01
MARK3-210ENST00000556463 RARS2Q5T160 578 aaKnown RBP8.71□□□□□ -1.01
MARK3-210ENST00000556463 RSBN1Q5VWQ0 802 aaPredicted RBP8.71□□□□□ -1.01
MARK3-210ENST00000556463 SLFN12LQ6IEE8 588 aa8.71□□□□□ -1.01
MARK3-210ENST00000556463 TRNP1Q6NT89 227 aa8.71□□□□□ -1.01
MARK3-210ENST00000556463 FAM196AQ6ZSG2 479 aa8.71□□□□□ -1.01
MARK3-210ENST00000556463 UHRF1Q96T88 793 aaPredicted RBP8.71□□□□□ -1.01
MARK3-210ENST00000556463 TRPV6Q9H1D0 765 aa8.71□□□□□ -1.01
MARK3-210ENST00000556463 CYP26B1Q9NR63 512 aa8.71□□□□□ -1.01
MARK3-210ENST00000556463 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.71□□□□□ -1.01
MARK3-210ENST00000556463 PKD2L1Q9P0L9 805 aa8.71□□□□□ -1.01
MARK3-210ENST00000556463 USP18Q9UMW8 372 aa8.71□□□□□ -1.01
MARK3-210ENST00000556463 PCDHA10Q9Y5I2 948 aa8.71□□□□□ -1.01
MARK3-210ENST00000556463 A0A1W2PPW3 197 aa8.71□□□□□ -1.02
MARK3-210ENST00000556463 GLRA3O75311 464 aa8.71□□□□□ -1.02
MARK3-210ENST00000556463 GCATO75600 419 aa8.71□□□□□ -1.02
MARK3-210ENST00000556463 PRKACAP17612 351 aa8.71□□□□□ -1.02
MARK3-210ENST00000556463 ACADVLP49748 655 aa8.71□□□□□ -1.02
MARK3-210ENST00000556463 RAB15P59190 212 aa8.71□□□□□ -1.02
MARK3-210ENST00000556463 ABCE1P61221 599 aaKnown RBP8.71□□□□□ -1.02
MARK3-210ENST00000556463 TUBA4AP68366 448 aa8.71□□□□□ -1.02
MARK3-210ENST00000556463 DEPDC1Q5TB30 811 aa8.71□□□□□ -1.02
MARK3-210ENST00000556463 GALNT18Q6P9A2 607 aa8.71□□□□□ -1.02
MARK3-210ENST00000556463 MAMDC4Q6UXC1 1216 aa8.71□□□□□ -1.02
MARK3-210ENST00000556463 TMEM92Q6UXU6 159 aa8.71□□□□□ -1.02
MARK3-210ENST00000556463 MCF2L2Q86YR7 1114 aa8.71□□□□□ -1.02
MARK3-210ENST00000556463 WDR49Q8IV35 697 aa8.71□□□□□ -1.02
MARK3-210ENST00000556463 PARP8Q8N3A8 854 aa8.71□□□□□ -1.02
MARK3-210ENST00000556463 MPP5Q8N3R9 675 aa8.71□□□□□ -1.02
MARK3-210ENST00000556463 ZSCAN18Q8TBC5 510 aaPredicted RBP8.71□□□□□ -1.02
MARK3-210ENST00000556463 DLG3Q92796 817 aa8.71□□□□□ -1.02
MARK3-210ENST00000556463 AKT1S1Q96B36 256 aa8.71□□□□□ -1.02
MARK3-210ENST00000556463 RNF157Q96PX1 679 aa8.71□□□□□ -1.02
MARK3-210ENST00000556463 MCMBPQ9BTE3 642 aa8.71□□□□□ -1.02
MARK3-210ENST00000556463 COPG2Q9UBF2 871 aa8.71□□□□□ -1.02
MARK3-210ENST00000556463 DCDC2Q9UHG0 476 aa8.71□□□□□ -1.02
MARK3-210ENST00000556463 TOR1BO14657 336 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms