RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 ITGB6P18564 788 aa7.16□□□□□ -1.26
ATXN3-236ENST00000556220 CR2P20023 1033 aa7.16□□□□□ -1.26
ATXN3-236ENST00000556220 GALCP54803 685 aa7.16□□□□□ -1.26
ATXN3-236ENST00000556220 OXCT1P55809 520 aa7.16□□□□□ -1.26
ATXN3-236ENST00000556220 NXPH1P58417 271 aa7.16□□□□□ -1.26
ATXN3-236ENST00000556220 ASIC1P78348 528 aa7.16□□□□□ -1.26
ATXN3-236ENST00000556220 NFKB2Q00653 900 aa7.16□□□□□ -1.26
ATXN3-236ENST00000556220 ARID5AQ03989 594 aa7.16□□□□□ -1.26
ATXN3-236ENST00000556220 KCNA1Q09470 495 aa7.16□□□□□ -1.26
ATXN3-236ENST00000556220 TTC31Q49AM3 519 aaPredicted RBP7.16□□□□□ -1.26
ATXN3-236ENST00000556220 USP30Q70CQ3 517 aa7.16□□□□□ -1.26
ATXN3-236ENST00000556220 GOLGA1Q92805 767 aa7.16□□□□□ -1.26
ATXN3-236ENST00000556220 SLC46A1Q96NT5 459 aa7.16□□□□□ -1.26
ATXN3-236ENST00000556220 DEPDC7Q96QD5 511 aa7.16□□□□□ -1.26
ATXN3-236ENST00000556220 ACCSQ96QU6 501 aa7.16□□□□□ -1.26
ATXN3-236ENST00000556220 FBXO44Q9H4M3 255 aa7.16□□□□□ -1.26
ATXN3-236ENST00000556220 DMAP1Q9NPF5 467 aaPredicted RBP7.16□□□□□ -1.26
ATXN3-236ENST00000556220 PRSS16Q9NQE7 514 aa7.16□□□□□ -1.26
ATXN3-236ENST00000556220 AASDHPPTQ9NRN7 309 aa7.16□□□□□ -1.26
ATXN3-236ENST00000556220 OSER1Q9NX31 292 aa7.16□□□□□ -1.26
ATXN3-236ENST00000556220 PLA2G4CQ9UP65 541 aa7.16□□□□□ -1.26
ATXN3-236ENST00000556220 NCKAP1Q9Y2A7 1128 aa7.16□□□□□ -1.26
ATXN3-236ENST00000556220 ATP8B3O60423 1300 aa7.16□□□□□ -1.26
ATXN3-236ENST00000556220 SPENQ96T58 3664 aaKnown RBP7.16□□□□□ -1.26
ATXN3-236ENST00000556220 MYH11P35749 1972 aa7.15□□□□□ -1.26
ATXN3-236ENST00000556220 ICE1Q9Y2F5 2266 aa7.15□□□□□ -1.26
ATXN3-236ENST00000556220 VWA3AA6NCI4 1184 aa7.15□□□□□ -1.26
ATXN3-236ENST00000556220 FAM47DPA6NHR8 397 aa7.15□□□□□ -1.26
ATXN3-236ENST00000556220 C10orf142B7Z368 130 aa7.15□□□□□ -1.26
ATXN3-236ENST00000556220 TRIM38O00635 465 aa7.15□□□□□ -1.26
ATXN3-236ENST00000556220 MDM4O15151 490 aa7.15□□□□□ -1.26
ATXN3-236ENST00000556220 OPA1O60313 960 aa7.15□□□□□ -1.26
ATXN3-236ENST00000556220 STC2O76061 302 aa7.15□□□□□ -1.26
ATXN3-236ENST00000556220 PRPF6O94906 941 aaKnown RBP7.15□□□□□ -1.26
ATXN3-236ENST00000556220 SFTPCP11686 197 aa7.15□□□□□ -1.26
ATXN3-236ENST00000556220 RARGP13631 454 aa7.15□□□□□ -1.26
ATXN3-236ENST00000556220 RBMS1P29558 406 aaKnown RBP7.15□□□□□ -1.26
ATXN3-236ENST00000556220 INHBCP55103 352 aa7.15□□□□□ -1.26
ATXN3-236ENST00000556220 SURF1Q15526 300 aa7.15□□□□□ -1.26
ATXN3-236ENST00000556220 FNDC3BQ53EP0 1204 aaKnown RBP7.15□□□□□ -1.26
ATXN3-236ENST00000556220 L1TD1Q5T7N2 865 aaKnown RBP7.15□□□□□ -1.26
ATXN3-236ENST00000556220 NCEH1Q6PIU2 408 aa7.15□□□□□ -1.26
ATXN3-236ENST00000556220 TRAPPC11Q7Z392 1133 aa7.15□□□□□ -1.26
ATXN3-236ENST00000556220 ZNF366Q8N895 744 aa7.15□□□□□ -1.26
ATXN3-236ENST00000556220 ZMIZ2Q8NF64 920 aa7.15□□□□□ -1.26
ATXN3-236ENST00000556220 GPBAR1Q8TDU6 330 aa7.15□□□□□ -1.26
ATXN3-236ENST00000556220 CYB5D2Q8WUJ1 264 aa7.15□□□□□ -1.26
ATXN3-236ENST00000556220 RAD54LQ92698 747 aa7.15□□□□□ -1.26
ATXN3-236ENST00000556220 CALML4Q96GE6 196 aa7.15□□□□□ -1.26
ATXN3-236ENST00000556220 SMARCD1Q96GM5 515 aa7.15□□□□□ -1.26
ATXN3-236ENST00000556220 HRASLS5Q96KN8 279 aa7.15□□□□□ -1.26
ATXN3-236ENST00000556220 SMOQ99835 787 aa7.15□□□□□ -1.26
ATXN3-236ENST00000556220 SEMA3CQ99985 751 aa7.15□□□□□ -1.26
ATXN3-236ENST00000556220 CBWD1Q9BRT8 395 aa7.15□□□□□ -1.26
ATXN3-236ENST00000556220 MED10Q9BTT4 135 aa7.15□□□□□ -1.26
ATXN3-236ENST00000556220 SLC2A11Q9BYW1 496 aa7.15□□□□□ -1.26
ATXN3-236ENST00000556220 CEP44Q9C0F1 390 aa7.15□□□□□ -1.26
ATXN3-236ENST00000556220 PCIF1Q9H4Z3 704 aa7.15□□□□□ -1.26
ATXN3-236ENST00000556220 FBXL12Q9NXK8 326 aa7.15□□□□□ -1.26
ATXN3-236ENST00000556220 SUN2Q9UH99 717 aa7.15□□□□□ -1.26
ATXN3-236ENST00000556220 NUDT5Q9UKK9 219 aa7.15□□□□□ -1.26
ATXN3-236ENST00000556220 SCML1Q9UN30 329 aa7.15□□□□□ -1.26
ATXN3-236ENST00000556220 SCML2Q9UQR0 700 aa7.15□□□□□ -1.26
ATXN3-236ENST00000556220 TMEM131Q92545 1883 aa7.15□□□□□ -1.27
ATXN3-236ENST00000556220 ZFHX3Q15911 3703 aa7.14□□□□□ -1.27
ATXN3-236ENST00000556220 LRRC72A6NJI9 287 aa7.14□□□□□ -1.27
ATXN3-236ENST00000556220 ZNF233A6NK53 670 aa7.14□□□□□ -1.27
ATXN3-236ENST00000556220 ENO4A6NNW6 628 aa7.14□□□□□ -1.27
ATXN3-236ENST00000556220 CSO75390 466 aaKnown RBP7.14□□□□□ -1.27
ATXN3-236ENST00000556220 BEST1O76090 585 aa7.14□□□□□ -1.27
ATXN3-236ENST00000556220 CYBBP04839 570 aa7.14□□□□□ -1.27
ATXN3-236ENST00000556220 RNASE1P07998 156 aaKnown RBP7.14□□□□□ -1.27
ATXN3-236ENST00000556220 CKMT1AP12532 417 aa7.14□□□□□ -1.27
ATXN3-236ENST00000556220 GSTT1P30711 240 aa7.14□□□□□ -1.27
ATXN3-236ENST00000556220 DDIT3P35638 169 aa7.14□□□□□ -1.27
ATXN3-236ENST00000556220 UBA7P41226 1012 aa7.14□□□□□ -1.27
ATXN3-236ENST00000556220 CCR5P51681 352 aa7.14□□□□□ -1.27
ATXN3-236ENST00000556220 ANAPC15P60006 121 aa7.14□□□□□ -1.27
ATXN3-236ENST00000556220 TNNC1P63316 161 aa7.14□□□□□ -1.27
ATXN3-236ENST00000556220 COG7P83436 770 aa7.14□□□□□ -1.27
ATXN3-236ENST00000556220 DAB2P98082 770 aa7.14□□□□□ -1.27
ATXN3-236ENST00000556220 TLE1Q04724 770 aa7.14□□□□□ -1.27
ATXN3-236ENST00000556220 CKAP5Q14008 2032 aa7.14□□□□□ -1.27
ATXN3-236ENST00000556220 KCNJ12Q14500 433 aa7.14□□□□□ -1.27
ATXN3-236ENST00000556220 WDR72Q3MJ13 1102 aa7.14□□□□□ -1.27
ATXN3-236ENST00000556220 ZSCAN23Q3MJ62 389 aa7.14□□□□□ -1.27
ATXN3-236ENST00000556220 SLC45A4Q5BKX6 768 aa7.14□□□□□ -1.27
ATXN3-236ENST00000556220 C10orf120Q5SQS8 335 aa7.14□□□□□ -1.27
ATXN3-236ENST00000556220 ARL6IP4Q66PJ3 421 aaKnown RBP7.14□□□□□ -1.27
ATXN3-236ENST00000556220 ZNF776Q68DI1 518 aaPredicted RBP7.14□□□□□ -1.27
ATXN3-236ENST00000556220 SFR1Q86XK3 245 aa7.14□□□□□ -1.27
ATXN3-236ENST00000556220 SPATS2Q86XZ4 545 aaKnown RBP7.14□□□□□ -1.27
ATXN3-236ENST00000556220 RP1L1Q8IWN7 2480 aaPredicted RBP7.14□□□□□ -1.27
ATXN3-236ENST00000556220 FUKQ8N0W3 1084 aa7.14□□□□□ -1.27
ATXN3-236ENST00000556220 GPD1LQ8N335 351 aa7.14□□□□□ -1.27
ATXN3-236ENST00000556220 SLC25A45Q8N413 288 aa7.14□□□□□ -1.27
ATXN3-236ENST00000556220 MFSD2AQ8NA29 543 aa7.14□□□□□ -1.27
ATXN3-236ENST00000556220 OR2T34Q8NGX1 318 aa7.14□□□□□ -1.27
ATXN3-236ENST00000556220 FBF1Q8TES7 1133 aa7.14□□□□□ -1.27
ATXN3-236ENST00000556220 GANCQ8TET4 914 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms