RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 PCDHGA11Q9Y5H2 935 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 SNX11Q9Y5W9 270 aa6.9□□□□□ -1.3
PSEN1-216ENST00000556066 DOCK4Q8N1I0 1966 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 ZNF462Q96JM2 2506 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 HECTD1Q9ULT8 2610 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 A0A1B0GVM2 712 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 TARSL2A2RTX5 802 aaKnown RBP6.89□□□□□ -1.31
PSEN1-216ENST00000556066 GTPBP10A4D1E9 387 aaKnown RBP6.89□□□□□ -1.31
PSEN1-216ENST00000556066 TMEM8BA6NDV4 472 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 TCAF2A6NFQ2 919 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 LRRC72A6NJI9 287 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 M0QYT0 321 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 BNIP3LO60238 219 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 MAN1A2O60476 641 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 HSF2BPO75031 334 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 IGLV3-25P01717 112 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 ERBB2P04626 1255 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 IGHV4-34P06331 123 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 GLI1P08151 1106 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 VAV1P15498 845 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 MZF1P28698 734 aaPredicted RBP6.89□□□□□ -1.31
PSEN1-216ENST00000556066 GRIA4P48058 902 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 GALCP54803 685 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 C21orf59P57076 290 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 SNX16P57768 344 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 IL9RQ01113 521 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 CENPCQ03188 943 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 DPCR1Q3MIW9 517 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 POM121L1PQ3SYA9 428 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 CRTC2Q53ET0 693 aaPredicted RBP6.89□□□□□ -1.31
PSEN1-216ENST00000556066 C9orf64Q5T6V5 341 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 FBXL22Q6P050 247 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 USP30Q70CQ3 517 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 RAB44Q7Z6P3 723 aaPredicted RBP6.89□□□□□ -1.31
PSEN1-216ENST00000556066 AADATQ8N5Z0 425 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 OR14C36Q8NHC7 312 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 SLC6A18Q96N87 628 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 SLC2A13Q96QE2 648 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 FAM129BQ96TA1 746 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 PRMT1Q99873 361 aaKnown RBP6.89□□□□□ -1.31
PSEN1-216ENST00000556066 PLCD4Q9BRC7 762 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 TUBGCP2Q9BSJ2 902 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 NDST4Q9H3R1 872 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 CLSTN2Q9H4D0 955 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 SIX2Q9NPC8 291 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 AASDHPPTQ9NRN7 309 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 SLC25A13Q9UJS0 675 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 PCOLCE2Q9UKZ9 415 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 SCML1Q9UN30 329 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 BTBD3Q9Y2F9 522 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 KNTC1P50748 2209 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 SPTA1P02549 2419 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 TENM4Q6N022 2769 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 LOC400499M0QZD8 3231 aa6.89□□□□□ -1.31
PSEN1-216ENST00000556066 ITIH6Q6UXX5 1313 aa6.88□□□□□ -1.31
PSEN1-216ENST00000556066 TBC1D3DA0A087WVF3 549 aa6.88□□□□□ -1.31
PSEN1-216ENST00000556066 TBC1D3IA0A087WXS9 549 aa6.88□□□□□ -1.31
PSEN1-216ENST00000556066 TBC1D3EA0A087X179 549 aa6.88□□□□□ -1.31
PSEN1-216ENST00000556066 TBC1D3KA0A087X1G2 549 aa6.88□□□□□ -1.31
PSEN1-216ENST00000556066 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.88□□□□□ -1.31
PSEN1-216ENST00000556066 SYCE3A1L190 88 aa6.88□□□□□ -1.31
PSEN1-216ENST00000556066 TBC1D3FA6NER0 549 aaPredicted RBP6.88□□□□□ -1.31
PSEN1-216ENST00000556066 HMGB1P1B2RPK0 211 aaPredicted RBP6.88□□□□□ -1.31
PSEN1-216ENST00000556066 TBC1D3LB9A6J9 549 aa6.88□□□□□ -1.31
PSEN1-216ENST00000556066 H0Y8X5 98 aa6.88□□□□□ -1.31
PSEN1-216ENST00000556066 TAF4O00268 1085 aa6.88□□□□□ -1.31
PSEN1-216ENST00000556066 PLK4O00444 970 aa6.88□□□□□ -1.31
PSEN1-216ENST00000556066 FLRT2O43155 660 aa6.88□□□□□ -1.31
PSEN1-216ENST00000556066 CBFA2T3O75081 653 aa6.88□□□□□ -1.31
PSEN1-216ENST00000556066 PAGE1O75459 146 aa6.88□□□□□ -1.31
PSEN1-216ENST00000556066 DAB1O75553 588 aa6.88□□□□□ -1.31
PSEN1-216ENST00000556066 MBD3O95983 291 aa6.88□□□□□ -1.31
PSEN1-216ENST00000556066 ATXN1LP0C7T5 689 aaKnown RBP6.88□□□□□ -1.31
PSEN1-216ENST00000556066 TBC1D3HP0C7X1 549 aa6.88□□□□□ -1.31
PSEN1-216ENST00000556066 ZNF883P0CG24 379 aa6.88□□□□□ -1.31
PSEN1-216ENST00000556066 ZNF18P17022 549 aa6.88□□□□□ -1.31
PSEN1-216ENST00000556066 GOT1P17174 413 aa6.88□□□□□ -1.31
PSEN1-216ENST00000556066 C5AR1P21730 350 aa6.88□□□□□ -1.31
PSEN1-216ENST00000556066 NOS2P35228 1153 aa6.88□□□□□ -1.31
PSEN1-216ENST00000556066 SULT1E1P49888 294 aa6.88□□□□□ -1.31
PSEN1-216ENST00000556066 IRAK1P51617 712 aa6.88□□□□□ -1.31
PSEN1-216ENST00000556066 OXCT1P55809 520 aa6.88□□□□□ -1.31
PSEN1-216ENST00000556066 BPIFB4P59827 614 aa6.88□□□□□ -1.31
PSEN1-216ENST00000556066 RACK1P63244 317 aaKnown RBP6.88□□□□□ -1.31
PSEN1-216ENST00000556066 SLC6A3Q01959 620 aa6.88□□□□□ -1.31
PSEN1-216ENST00000556066 SULT2A1Q06520 285 aa6.88□□□□□ -1.31
PSEN1-216ENST00000556066 ZNF177Q13360 481 aaPredicted RBP6.88□□□□□ -1.31
PSEN1-216ENST00000556066 SLC12A1Q13621 1099 aa6.88□□□□□ -1.31
PSEN1-216ENST00000556066 AUHQ13825 339 aaKnown RBP6.88□□□□□ -1.31
PSEN1-216ENST00000556066 ELAVL3Q14576 367 aaKnown RBP6.88□□□□□ -1.31
PSEN1-216ENST00000556066 DRAP1Q14919 205 aaPredicted RBP6.88□□□□□ -1.31
PSEN1-216ENST00000556066 PTPN20Q4JDL3 420 aa6.88□□□□□ -1.31
PSEN1-216ENST00000556066 VWA3BQ502W6 1294 aa6.88□□□□□ -1.31
PSEN1-216ENST00000556066 KCNT1Q5JUK3 1230 aa6.88□□□□□ -1.31
PSEN1-216ENST00000556066 PRAMEF14Q5SWL7 426 aa6.88□□□□□ -1.31
PSEN1-216ENST00000556066 FAM102AQ5T9C2 384 aaPredicted RBP6.88□□□□□ -1.31
PSEN1-216ENST00000556066 CCDC181Q5TID7 509 aa6.88□□□□□ -1.31
PSEN1-216ENST00000556066 TTC39BQ5VTQ0 682 aaPredicted RBP6.88□□□□□ -1.31
PSEN1-216ENST00000556066 TAF3Q5VWG9 929 aa6.88□□□□□ -1.31
PSEN1-216ENST00000556066 TBC1D3GQ6DHY5 549 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms