RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 CCL15Q16663 113 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 UGP2Q16851 508 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 XKR4Q5GH76 650 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 VWA5B1Q5TIE3 1220 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 NAIF1Q69YI7 327 aaPredicted RBP7.13□□□□□ -1.27
TDP1-213ENST00000555880 TWF2Q6IBS0 349 aaKnown RBP7.13□□□□□ -1.27
TDP1-213ENST00000555880 C16orf89Q6UX73 402 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 ACAD11Q709F0 780 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 SDCCAG8Q86SQ7 713 aaPredicted RBP7.13□□□□□ -1.27
TDP1-213ENST00000555880 CLEC14AQ86T13 490 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 SETD3Q86TU7 594 aaPredicted RBP7.13□□□□□ -1.27
TDP1-213ENST00000555880 OSTM1Q86WC4 334 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 ST13P4Q8IZP2 240 aaPredicted RBP7.13□□□□□ -1.27
TDP1-213ENST00000555880 ARHGAP18Q8N392 663 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 FBXW8Q8N3Y1 598 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 ZNF781Q8N8C0 355 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 OR6Y1Q8NGX8 325 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 ADAM32Q8TC27 787 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 DNAJB3Q8WWF6 145 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 HDAC11Q96DB2 347 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 VPS39Q96JC1 886 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 MAML3Q96JK9 1138 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 SCYL1Q96KG9 808 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 AGAP2Q99490 1192 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 TINF2Q9BSI4 451 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 ULBP1Q9BZM6 244 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 SHCBP1LQ9BZQ2 653 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 TASP1Q9H6P5 420 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 CNGB3Q9NQW8 809 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 SLC38A7Q9NVC3 462 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 ZNF358Q9NW07 568 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 OXSMQ9NWU1 459 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 FBXW11Q9UKB1 542 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 GJD2Q9UKL4 321 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 SLC39A10Q9ULF5 831 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 SLC45A1Q9Y2W3 748 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 IPPQ9Y573 584 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 ASB3Q9Y575 518 aa7.13□□□□□ -1.27
TDP1-213ENST00000555880 GOLGA8QA0A0J9YX86 632 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 LOC100653049A0A140TA62 436 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 ZCWPW2A0A1B0GU75 182 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 MBLAC1A4D2B0 266 aaPredicted RBP7.12□□□□□ -1.27
TDP1-213ENST00000555880 GOLGA8OA6NCC3 632 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 C9IYK1 514 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 GOLGA8NF8WBI6 632 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 SLCO1B7G3V0H7 640 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 G3V2L1 256 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 FAM72CH0Y354 149 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 ZNF195O14628 629 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 SLC22A2O15244 555 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 HDAC3O15379 428 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 DYNC1LI2O43237 492 aaPredicted RBP7.12□□□□□ -1.27
TDP1-213ENST00000555880 KRT34O76011 436 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 BEST1O76090 585 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 UPP2O95045 317 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 F2P00734 622 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 LTFP02788 710 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 C2P06681 752 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 NFKB1P19838 968 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 LHX1P48742 406 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 RPL14P50914 215 aaKnown RBP7.12□□□□□ -1.27
TDP1-213ENST00000555880 GJA9P57773 515 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 DAOAP59103 153 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 SOX4Q06945 474 aaPredicted RBP7.12□□□□□ -1.27
TDP1-213ENST00000555880 GALNT2Q10471 571 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 KLF10Q13118 480 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 SEMA3BQ13214 749 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 MED21Q13503 144 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 OLIG2Q13516 323 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 CCNIQ14094 377 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 TRIP10Q15642 601 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 TCHHL1Q5QJ38 904 aaPredicted RBP7.12□□□□□ -1.27
TDP1-213ENST00000555880 FAM72AQ5TYM5 149 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 RNF220Q5VTB9 566 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 LIPMQ5VYY2 423 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 WSCD1Q658N2 575 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 SEL1L3Q68CR1 1132 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 FAM72DQ6L9T8 149 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 PGM2L1Q6PCE3 622 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 ZYG11AQ6WRX3 759 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 FRMD7Q6ZUT3 714 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 GPR142Q7Z601 462 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 FAM72BQ86X60 149 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 PDSS2Q86YH6 399 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 TMEM86AQ8N2M4 240 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 PHTF2Q8N3S3 785 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 PIP4K2CQ8TBX8 421 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 ZNF483Q8TF39 744 aaPredicted RBP7.12□□□□□ -1.27
TDP1-213ENST00000555880 GDPD5Q8WTR4 605 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 RNF34Q969K3 372 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 PPP1R2P1Q96PQ5 205 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 SH3GL3Q99963 347 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 CENPKQ9BS16 269 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 ACE2Q9BYF1 805 aaPredicted RBP7.12□□□□□ -1.27
TDP1-213ENST00000555880 WDCPQ9H6R7 721 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 CAB39LQ9H9S4 337 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 PAPOLBQ9NRJ5 636 aaKnown RBP7.12□□□□□ -1.27
TDP1-213ENST00000555880 IARS2Q9NSE4 1012 aaKnown RBP7.12□□□□□ -1.27
TDP1-213ENST00000555880 VTI1BQ9UEU0 232 aa7.12□□□□□ -1.27
TDP1-213ENST00000555880 PRPF19Q9UMS4 504 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms