RNA–Protein interactions for RNA: ENST00000555709.6

MTHFD1-211, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-211ENST00000555709 SPTA1P02549 2419 aa12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 SPAARA0A1B0GVQ0 90 aa12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 WASH4PA8MWX3 477 aa12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 SPECC1L-ADORA2AF8WAN1 911 aa12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 CST8O60676 142 aa12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 PRB1P04280 392 aa12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 PLA2G2AP14555 144 aa12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 RHOQP17081 205 aa12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 ERCC2P18074 760 aa12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 AMPD1P23109 780 aa12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 CTHP32929 405 aa12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 CETN2P41208 172 aa12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 TUBB2AQ13885 445 aa12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 TFDP2Q14188 446 aa12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 WHAMMP3Q1A5X7 153 aa12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 ALFQ53S48 1182 aa12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 DNTTIP2Q5QJE6 756 aaKnown RBP12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 RABGAP1LQ5R372 815 aa12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 TTC39BQ5VTQ0 682 aaPredicted RBP12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 KAZNQ674X7 775 aa12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 LRRC31Q6UY01 552 aa12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 ZNF572Q7Z3I7 529 aaPredicted RBP12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 CIR1Q86X95 450 aaPredicted RBP12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 RFX6Q8HWS3 928 aa12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 MFSD6LQ8IWD5 586 aa12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 NPWQ8N729 165 aa12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 RTL3Q8N8U3 475 aaKnown RBP12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 HJURPQ8NCD3 748 aaPredicted RBP12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 TTC16Q8NEE8 873 aa12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 BPIFB1Q8TDL5 484 aa12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 OSCP1Q8WVF1 389 aa12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 HNRNPLLQ8WVV9 542 aaKnown RBP12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 E2F7Q96AV8 911 aa12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 OTUB2Q96DC9 234 aa12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 RPRD1AQ96P16 312 aaPredicted RBP12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 TUBB2BQ9BVA1 445 aa12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 ZYG11BQ9C0D3 744 aa12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 KLC2Q9H0B6 622 aa12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 PRDM16Q9HAZ2 1276 aa12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 SCUBE2Q9NQ36 999 aa12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 ETNK2Q9NVF9 386 aa12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 TBC1D14Q9P2M4 693 aa12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 RNF14Q9UBS8 474 aa12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 MFHAS1Q9Y4C4 1052 aa12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 WNT6Q9Y6F9 365 aa12.03□□□□□ -0.48
MTHFD1-211ENST00000555709 ABCA7Q8IZY2 2146 aa12.02□□□□□ -0.48
MTHFD1-211ENST00000555709 PATE3B3GLJ2 98 aa12.02□□□□□ -0.49
MTHFD1-211ENST00000555709 APOC4-APOC2K7ER74 178 aa12.02□□□□□ -0.49
MTHFD1-211ENST00000555709 TRDMT1O14717 391 aaKnown RBP12.02□□□□□ -0.49
MTHFD1-211ENST00000555709 SLC9A3R1O14745 358 aaPredicted RBP12.02□□□□□ -0.49
MTHFD1-211ENST00000555709 APOL1O14791 398 aa12.02□□□□□ -0.49
MTHFD1-211ENST00000555709 MFSD11O43934 449 aa12.02□□□□□ -0.49
MTHFD1-211ENST00000555709 CNTN5O94779 1100 aa12.02□□□□□ -0.49
MTHFD1-211ENST00000555709 TJP3O95049 919 aa12.02□□□□□ -0.49
MTHFD1-211ENST00000555709 APOC2P02655 101 aa12.02□□□□□ -0.49
MTHFD1-211ENST00000555709 PECAM1P16284 738 aaPredicted RBP12.02□□□□□ -0.49
MTHFD1-211ENST00000555709 TGM2P21980 687 aa12.02□□□□□ -0.49
MTHFD1-211ENST00000555709 CHKAP35790 457 aa12.02□□□□□ -0.49
MTHFD1-211ENST00000555709 RPS24P62847 133 aaKnown RBP12.02□□□□□ -0.49
MTHFD1-211ENST00000555709 DYNLT1P63172 113 aa12.02□□□□□ -0.49
MTHFD1-211ENST00000555709 PAFAH1B3Q15102 231 aaKnown RBP12.02□□□□□ -0.49
MTHFD1-211ENST00000555709 LONRF2Q1L5Z9 754 aa12.02□□□□□ -0.49
MTHFD1-211ENST00000555709 EML3Q32P44 896 aa12.02□□□□□ -0.49
MTHFD1-211ENST00000555709 RWDD4Q6NW29 188 aaKnown RBP12.02□□□□□ -0.49
MTHFD1-211ENST00000555709 CHST9Q7L1S5 443 aa12.02□□□□□ -0.49
MTHFD1-211ENST00000555709 PIP4P1Q86T03 277 aa12.02□□□□□ -0.49
MTHFD1-211ENST00000555709 RALGPS2Q86X27 583 aaPredicted RBP12.02□□□□□ -0.49
MTHFD1-211ENST00000555709 CHCHD4Q8N4Q1 142 aa12.02□□□□□ -0.49
MTHFD1-211ENST00000555709 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.02□□□□□ -0.49
MTHFD1-211ENST00000555709 LRIG1Q96JA1 1093 aa12.02□□□□□ -0.49
MTHFD1-211ENST00000555709 NAP1L3Q99457 506 aaPredicted RBP12.02□□□□□ -0.49
MTHFD1-211ENST00000555709 LINC00597Q9H2U6 94 aa12.02□□□□□ -0.49
MTHFD1-211ENST00000555709 RETREG1Q9H6L5 497 aa12.02□□□□□ -0.49
MTHFD1-211ENST00000555709 CATSPERBQ9H7T0 1116 aa12.02□□□□□ -0.49
MTHFD1-211ENST00000555709 TMEM248Q9NWD8 314 aa12.02□□□□□ -0.49
MTHFD1-211ENST00000555709 MPP6Q9NZW5 540 aa12.02□□□□□ -0.49
MTHFD1-211ENST00000555709 MARK1Q9P0L2 795 aa12.02□□□□□ -0.49
MTHFD1-211ENST00000555709 R3HDM2Q9Y2K5 976 aaKnown RBP12.02□□□□□ -0.49
MTHFD1-211ENST00000555709 KIAA1549LQ6ZVL6 1849 aa12.02□□□□□ -0.49
MTHFD1-211ENST00000555709 URB1O60287 2271 aaKnown RBP12.02□□□□□ -0.49
MTHFD1-211ENST00000555709 NYNRINQ9P2P1 1898 aaKnown RBP12.02□□□□□ -0.49
MTHFD1-211ENST00000555709 A0A1B0GVM2 712 aa12.01□□□□□ -0.49
MTHFD1-211ENST00000555709 TCAF2A6NFQ2 919 aa12.01□□□□□ -0.49
MTHFD1-211ENST00000555709 H0Y626 953 aa12.01□□□□□ -0.49
MTHFD1-211ENST00000555709 KHNYNO15037 678 aaKnown RBP12.01□□□□□ -0.49
MTHFD1-211ENST00000555709 CHADO15335 359 aa12.01□□□□□ -0.49
MTHFD1-211ENST00000555709 DAPK3O43293 454 aa12.01□□□□□ -0.49
MTHFD1-211ENST00000555709 TSPAN3O60637 253 aa12.01□□□□□ -0.49
MTHFD1-211ENST00000555709 TRIM16O95361 564 aa12.01□□□□□ -0.49
MTHFD1-211ENST00000555709 PENKP01210 267 aaPredicted RBP12.01□□□□□ -0.49
MTHFD1-211ENST00000555709 CYP17A1P05093 508 aa12.01□□□□□ -0.49
MTHFD1-211ENST00000555709 ZFXP17010 805 aaPredicted RBP12.01□□□□□ -0.49
MTHFD1-211ENST00000555709 HOXD9P28356 352 aaPredicted RBP12.01□□□□□ -0.49
MTHFD1-211ENST00000555709 MAPKAPK2P49137 400 aa12.01□□□□□ -0.49
MTHFD1-211ENST00000555709 CDH4P55283 916 aa12.01□□□□□ -0.49
MTHFD1-211ENST00000555709 SIM1P81133 766 aaPredicted RBP12.01□□□□□ -0.49
MTHFD1-211ENST00000555709 GBE1Q04446 702 aa12.01□□□□□ -0.49
MTHFD1-211ENST00000555709 CKAP4Q07065 602 aaKnown RBP12.01□□□□□ -0.49
MTHFD1-211ENST00000555709 PON2Q15165 354 aa12.01□□□□□ -0.49
MTHFD1-211ENST00000555709 ELF2Q15723 593 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms