RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 HDAC11Q96DB2 347 aa12.95□□□□□ -0.34
SYNE2-219ENST00000555323 ZNF599Q96NL3 588 aa12.95□□□□□ -0.34
SYNE2-219ENST00000555323 ACOX2Q99424 681 aa12.95□□□□□ -0.34
SYNE2-219ENST00000555323 GABRG3Q99928 467 aa12.95□□□□□ -0.34
SYNE2-219ENST00000555323 HEMGNQ9BXL5 484 aa12.95□□□□□ -0.34
SYNE2-219ENST00000555323 C11orf16Q9NQ32 467 aa12.95□□□□□ -0.34
SYNE2-219ENST00000555323 SLCO3A1Q9UIG8 710 aa12.95□□□□□ -0.34
SYNE2-219ENST00000555323 SNX12Q9UMY4 172 aa12.95□□□□□ -0.34
SYNE2-219ENST00000555323 STON1Q9Y6Q2 735 aa12.95□□□□□ -0.34
SYNE2-219ENST00000555323 NUP205Q92621 2012 aa12.95□□□□□ -0.34
SYNE2-219ENST00000555323 J3KR12 359 aa12.94□□□□□ -0.34
SYNE2-219ENST00000555323 DFFAO00273 331 aa12.94□□□□□ -0.34
SYNE2-219ENST00000555323 ADAM23O75077 832 aa12.94□□□□□ -0.34
SYNE2-219ENST00000555323 ZNF821O75541 412 aaPredicted RBP12.94□□□□□ -0.34
SYNE2-219ENST00000555323 SRCP12931 536 aa12.94□□□□□ -0.34
SYNE2-219ENST00000555323 TCP1P17987 556 aaKnown RBP12.94□□□□□ -0.34
SYNE2-219ENST00000555323 IL12RB1P42701 662 aa12.94□□□□□ -0.34
SYNE2-219ENST00000555323 SERPINH1P50454 418 aaKnown RBP12.94□□□□□ -0.34
SYNE2-219ENST00000555323 PPIDQ08752 370 aaKnown RBP12.94□□□□□ -0.34
SYNE2-219ENST00000555323 XRCC4Q13426 336 aa12.94□□□□□ -0.34
SYNE2-219ENST00000555323 RFTN1Q14699 578 aaPredicted RBP12.94□□□□□ -0.34
SYNE2-219ENST00000555323 PDK1Q15118 436 aa12.94□□□□□ -0.34
SYNE2-219ENST00000555323 EOGTQ5NDL2 527 aa12.94□□□□□ -0.34
SYNE2-219ENST00000555323 SEL1L2Q5TEA6 688 aa12.94□□□□□ -0.34
SYNE2-219ENST00000555323 NPNTQ6UXI9 565 aa12.94□□□□□ -0.34
SYNE2-219ENST00000555323 ARHGAP36Q6ZRI8 547 aa12.94□□□□□ -0.34
SYNE2-219ENST00000555323 Q6ZS52 159 aa12.94□□□□□ -0.34
SYNE2-219ENST00000555323 SYT13Q7L8C5 426 aa12.94□□□□□ -0.34
SYNE2-219ENST00000555323 CHPFQ8IZ52 775 aa12.94□□□□□ -0.34
SYNE2-219ENST00000555323 SPEM1Q8N4L4 309 aa12.94□□□□□ -0.34
SYNE2-219ENST00000555323 FBXL6Q8N531 539 aa12.94□□□□□ -0.34
SYNE2-219ENST00000555323 TTC13Q8NBP0 860 aa12.94□□□□□ -0.34
SYNE2-219ENST00000555323 TXNDC5Q8NBS9 432 aaKnown RBP12.94□□□□□ -0.34
SYNE2-219ENST00000555323 NETO2Q8NC67 525 aa12.94□□□□□ -0.34
SYNE2-219ENST00000555323 RPLP0P6Q8NHW5 317 aa12.94□□□□□ -0.34
SYNE2-219ENST00000555323 FRS2Q8WU20 508 aa12.94□□□□□ -0.34
SYNE2-219ENST00000555323 ISG20Q96AZ6 181 aaKnown RBP12.94□□□□□ -0.34
SYNE2-219ENST00000555323 RPL10LQ96L21 214 aaKnown RBP12.94□□□□□ -0.34
SYNE2-219ENST00000555323 OSBPL9Q96SU4 736 aa12.94□□□□□ -0.34
SYNE2-219ENST00000555323 NAPGQ99747 312 aaPredicted RBP12.94□□□□□ -0.34
SYNE2-219ENST00000555323 CEP44Q9C0F1 390 aa12.94□□□□□ -0.34
SYNE2-219ENST00000555323 CD248Q9HCU0 757 aa12.94□□□□□ -0.34
SYNE2-219ENST00000555323 SAE1Q9UBE0 346 aaPredicted RBP12.94□□□□□ -0.34
SYNE2-219ENST00000555323 SUN2Q9UH99 717 aa12.94□□□□□ -0.34
SYNE2-219ENST00000555323 SLC25A13Q9UJS0 675 aa12.94□□□□□ -0.34
SYNE2-219ENST00000555323 HEY1Q9Y5J3 304 aa12.94□□□□□ -0.34
SYNE2-219ENST00000555323 MIA3Q5JRA6 1907 aa12.94□□□□□ -0.34
SYNE2-219ENST00000555323 TARSL2A2RTX5 802 aaKnown RBP12.93□□□□□ -0.34
SYNE2-219ENST00000555323 CTAGE9A4FU28 777 aa12.93□□□□□ -0.34
SYNE2-219ENST00000555323 PRR33A8MZF0 331 aa12.93□□□□□ -0.34
SYNE2-219ENST00000555323 WASH3PC4AMC7 463 aa12.93□□□□□ -0.34
SYNE2-219ENST00000555323 SGK1O00141 431 aa12.93□□□□□ -0.34
SYNE2-219ENST00000555323 DCNP07585 359 aaKnown RBP12.93□□□□□ -0.34
SYNE2-219ENST00000555323 PECAM1P16284 738 aaPredicted RBP12.93□□□□□ -0.34
SYNE2-219ENST00000555323 CXCR5P32302 372 aa12.93□□□□□ -0.34
SYNE2-219ENST00000555323 STK19P49842 368 aaPredicted RBP12.93□□□□□ -0.34
SYNE2-219ENST00000555323 SEC13P55735 322 aa12.93□□□□□ -0.34
SYNE2-219ENST00000555323 ST8SIA6P61647 398 aa12.93□□□□□ -0.34
SYNE2-219ENST00000555323 DYNLT1P63172 113 aa12.93□□□□□ -0.34
SYNE2-219ENST00000555323 HNRNPDQ14103 355 aaKnown RBP12.93□□□□□ -0.34
SYNE2-219ENST00000555323 NOMO1Q15155 1222 aa12.93□□□□□ -0.34
SYNE2-219ENST00000555323 DLG2Q15700 870 aa12.93□□□□□ -0.34
SYNE2-219ENST00000555323 CRY1Q16526 586 aa12.93□□□□□ -0.34
SYNE2-219ENST00000555323 HNRNPA1L2Q32P51 320 aaKnown RBP12.93□□□□□ -0.34
SYNE2-219ENST00000555323 TMCO4Q5TGY1 634 aa12.93□□□□□ -0.34
SYNE2-219ENST00000555323 SDE2Q6IQ49 451 aa12.93□□□□□ -0.34
SYNE2-219ENST00000555323 TIGD7Q6NT04 549 aaPredicted RBP12.93□□□□□ -0.34
SYNE2-219ENST00000555323 PKN3Q6P5Z2 889 aa12.93□□□□□ -0.34
SYNE2-219ENST00000555323 LINGO4Q6UY18 593 aa12.93□□□□□ -0.34
SYNE2-219ENST00000555323 ZSCAN30Q86W11 494 aa12.93□□□□□ -0.34
SYNE2-219ENST00000555323 TEX26Q8N6G2 289 aa12.93□□□□□ -0.34
SYNE2-219ENST00000555323 ALLCQ8N6M5 410 aa12.93□□□□□ -0.34
SYNE2-219ENST00000555323 ATP11CQ8NB49 1132 aa12.93□□□□□ -0.34
SYNE2-219ENST00000555323 ACTL9Q8TC94 416 aa12.93□□□□□ -0.34
SYNE2-219ENST00000555323 ACTRT1Q8TDG2 376 aa12.93□□□□□ -0.34
SYNE2-219ENST00000555323 MAML1Q92585 1016 aa12.93□□□□□ -0.34
SYNE2-219ENST00000555323 PTPRN2Q92932 1015 aa12.93□□□□□ -0.34
SYNE2-219ENST00000555323 MMP17Q9ULZ9 603 aa12.93□□□□□ -0.34
SYNE2-219ENST00000555323 ACTL7AQ9Y615 435 aa12.93□□□□□ -0.34
SYNE2-219ENST00000555323 MYO18AQ92614 2054 aaKnown RBP12.92□□□□□ -0.34
SYNE2-219ENST00000555323 A0A1W2PQF6 199 aa12.92□□□□□ -0.34
SYNE2-219ENST00000555323 TCRBV7S2A1N4TA0A589 114 aa12.92□□□□□ -0.34
SYNE2-219ENST00000555323 HACD1B0YJ81 288 aa12.92□□□□□ -0.34
SYNE2-219ENST00000555323 K7ERQ8 282 aa12.92□□□□□ -0.34
SYNE2-219ENST00000555323 PPP1R12AO14974 1030 aaPredicted RBP12.92□□□□□ -0.34
SYNE2-219ENST00000555323 MATN3O15232 486 aa12.92□□□□□ -0.34
SYNE2-219ENST00000555323 SMAD6O43541 496 aaKnown RBP12.92□□□□□ -0.34
SYNE2-219ENST00000555323 CEP104O60308 925 aa12.92□□□□□ -0.34
SYNE2-219ENST00000555323 PAPSS2O95340 614 aaPredicted RBP12.92□□□□□ -0.34
SYNE2-219ENST00000555323 MAP3K6O95382 1288 aa12.92□□□□□ -0.34
SYNE2-219ENST00000555323 KLF8O95600 359 aaPredicted RBP12.92□□□□□ -0.34
SYNE2-219ENST00000555323 PRKCHP24723 683 aa12.92□□□□□ -0.34
SYNE2-219ENST00000555323 AVPR2P30518 371 aa12.92□□□□□ -0.34
SYNE2-219ENST00000555323 NUMBP49757 651 aa12.92□□□□□ -0.34
SYNE2-219ENST00000555323 NSUN2Q08J23 767 aaKnown RBP eCLIP12.92□□□□□ -0.34
SYNE2-219ENST00000555323 MTAPQ13126 283 aa12.92□□□□□ -0.34
SYNE2-219ENST00000555323 CAMK2GQ13555 558 aaPredicted RBP12.92□□□□□ -0.34
SYNE2-219ENST00000555323 CYTH1Q15438 398 aa12.92□□□□□ -0.34
SYNE2-219ENST00000555323 SIX1Q15475 284 aaPredicted RBP12.92□□□□□ -0.34
SYNE2-219ENST00000555323 FNDC3BQ53EP0 1204 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms