RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 C22orf39Q6P5X5 142 aa12.37□□□□□ -0.43
SRP54-206ENST00000555317 PRR23CQ6ZRP0 262 aa12.37□□□□□ -0.43
SRP54-206ENST00000555317 USP30Q70CQ3 517 aa12.37□□□□□ -0.43
SRP54-206ENST00000555317 SYT12Q8IV01 421 aa12.37□□□□□ -0.43
SRP54-206ENST00000555317 NIPA2Q8N8Q9 360 aa12.37□□□□□ -0.43
SRP54-206ENST00000555317 SNX19Q92543 992 aa12.37□□□□□ -0.43
SRP54-206ENST00000555317 HSPH1Q92598 858 aa12.37□□□□□ -0.43
SRP54-206ENST00000555317 PTPRN2Q92932 1015 aa12.37□□□□□ -0.43
SRP54-206ENST00000555317 ARHGEF26Q96DR7 871 aa12.37□□□□□ -0.43
SRP54-206ENST00000555317 BTBD6Q96KE9 485 aa12.37□□□□□ -0.43
SRP54-206ENST00000555317 PEBP4Q96S96 227 aa12.37□□□□□ -0.43
SRP54-206ENST00000555317 KCTD15Q96SI1 283 aaPredicted RBP12.37□□□□□ -0.43
SRP54-206ENST00000555317 MAGEB5Q9BZ81 275 aa12.37□□□□□ -0.43
SRP54-206ENST00000555317 BTBD1Q9H0C5 482 aa12.37□□□□□ -0.43
SRP54-206ENST00000555317 SGK2Q9HBY8 427 aa12.37□□□□□ -0.43
SRP54-206ENST00000555317 PARD6AQ9NPB6 346 aa12.37□□□□□ -0.43
SRP54-206ENST00000555317 LUC7LQ9NQ29 371 aaKnown RBP12.37□□□□□ -0.43
SRP54-206ENST00000555317 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.37□□□□□ -0.43
SRP54-206ENST00000555317 SPTLC3Q9NUV7 552 aa12.37□□□□□ -0.43
SRP54-206ENST00000555317 FBXL12Q9NXK8 326 aa12.37□□□□□ -0.43
SRP54-206ENST00000555317 WSB2Q9NYS7 404 aaPredicted RBP12.37□□□□□ -0.43
SRP54-206ENST00000555317 ZNF212Q9UDV6 495 aa12.37□□□□□ -0.43
SRP54-206ENST00000555317 CHD5Q8TDI0 1954 aa12.37□□□□□ -0.43
SRP54-206ENST00000555317 LRRC72A6NJI9 287 aa12.36□□□□□ -0.43
SRP54-206ENST00000555317 H3BRJ5 948 aa12.36□□□□□ -0.43
SRP54-206ENST00000555317 KHNYNO15037 678 aaKnown RBP12.36□□□□□ -0.43
SRP54-206ENST00000555317 IPO7O95373 1038 aaKnown RBP12.36□□□□□ -0.43
SRP54-206ENST00000555317 SEMA4FO95754 770 aa12.36□□□□□ -0.43
SRP54-206ENST00000555317 MT-CO1P00395 513 aa12.36□□□□□ -0.43
SRP54-206ENST00000555317 IGLV3-19P01714 112 aa12.36□□□□□ -0.43
SRP54-206ENST00000555317 CFIP05156 583 aa12.36□□□□□ -0.43
SRP54-206ENST00000555317 TMEM253P0C7T8 217 aa12.36□□□□□ -0.43
SRP54-206ENST00000555317 VAV1P15498 845 aa12.36□□□□□ -0.43
SRP54-206ENST00000555317 GNSP15586 552 aa12.36□□□□□ -0.43
SRP54-206ENST00000555317 C5AR1P21730 350 aa12.36□□□□□ -0.43
SRP54-206ENST00000555317 SDHBP21912 280 aa12.36□□□□□ -0.43
SRP54-206ENST00000555317 GLDCP23378 1020 aa12.36□□□□□ -0.43
SRP54-206ENST00000555317 ITPKAP23677 461 aa12.36□□□□□ -0.43
SRP54-206ENST00000555317 SLC8A1P32418 973 aa12.36□□□□□ -0.43
SRP54-206ENST00000555317 HOXD12P35452 270 aa12.36□□□□□ -0.43
SRP54-206ENST00000555317 GJC1P36383 396 aa12.36□□□□□ -0.43
SRP54-206ENST00000555317 ACVRL1P37023 503 aa12.36□□□□□ -0.43
SRP54-206ENST00000555317 SERPINH1P50454 418 aaKnown RBP12.36□□□□□ -0.43
SRP54-206ENST00000555317 SEMA3BQ13214 749 aa12.36□□□□□ -0.43
SRP54-206ENST00000555317 KRT81Q14533 505 aa12.36□□□□□ -0.43
SRP54-206ENST00000555317 SMTNL2Q2TAL5 461 aa12.36□□□□□ -0.43
SRP54-206ENST00000555317 ASTE1Q2TB18 679 aaPredicted RBP12.36□□□□□ -0.43
SRP54-206ENST00000555317 RFX8Q6ZV50 586 aa12.36□□□□□ -0.43
SRP54-206ENST00000555317 GAS2L3Q86XJ1 694 aa12.36□□□□□ -0.43
SRP54-206ENST00000555317 CADM4Q8NFZ8 388 aa12.36□□□□□ -0.43
SRP54-206ENST00000555317 CEP76Q8TAP6 659 aa12.36□□□□□ -0.43
SRP54-206ENST00000555317 FRS2Q8WU20 508 aa12.36□□□□□ -0.43
SRP54-206ENST00000555317 ARHGEF2Q92974 986 aaKnown RBP12.36□□□□□ -0.43
SRP54-206ENST00000555317 CHP1Q99653 195 aa12.36□□□□□ -0.43
SRP54-206ENST00000555317 NUSAP1Q9BXS6 441 aaKnown RBP12.36□□□□□ -0.43
SRP54-206ENST00000555317 PACSIN1Q9BY11 444 aa12.36□□□□□ -0.43
SRP54-206ENST00000555317 CEP44Q9C0F1 390 aa12.36□□□□□ -0.43
SRP54-206ENST00000555317 PCED1AQ9H1Q7 454 aa12.36□□□□□ -0.43
SRP54-206ENST00000555317 DYRK4Q9NR20 520 aa12.36□□□□□ -0.43
SRP54-206ENST00000555317 NDFIP2Q9NV92 336 aa12.36□□□□□ -0.43
SRP54-206ENST00000555317 SUSD2Q9UGT4 822 aa12.36□□□□□ -0.43
SRP54-206ENST00000555317 CDV3Q9UKY7 258 aaKnown RBP12.36□□□□□ -0.43
SRP54-206ENST00000555317 NEU3Q9UQ49 428 aa12.36□□□□□ -0.43
SRP54-206ENST00000555317 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.36□□□□□ -0.43
SRP54-206ENST00000555317 ATXN2Q99700 1313 aaKnown RBP12.36□□□□□ -0.43
SRP54-206ENST00000555317 CACNA1EQ15878 2313 aa12.36□□□□□ -0.43
SRP54-206ENST00000555317 TNRC6BQ9UPQ9 1833 aaKnown RBP12.35□□□□□ -0.43
SRP54-206ENST00000555317 CXorf51AA0A1B0GTR3 108 aa12.35□□□□□ -0.43
SRP54-206ENST00000555317 A0A1W2PP55 124 aa12.35□□□□□ -0.43
SRP54-206ENST00000555317 FAM47DPA6NHR8 397 aa12.35□□□□□ -0.43
SRP54-206ENST00000555317 ARHGAP42A6NI28 874 aa12.35□□□□□ -0.43
SRP54-206ENST00000555317 TMEM110-MUSTN1A8MSY1 372 aa12.35□□□□□ -0.43
SRP54-206ENST00000555317 WASH4PA8MWX3 477 aa12.35□□□□□ -0.43
SRP54-206ENST00000555317 RASA4BC9J798 803 aa12.35□□□□□ -0.43
SRP54-206ENST00000555317 K7ERQ8 282 aa12.35□□□□□ -0.43
SRP54-206ENST00000555317 MCF2LO15068 1137 aa12.35□□□□□ -0.43
SRP54-206ENST00000555317 RASA4O43374 803 aa12.35□□□□□ -0.43
SRP54-206ENST00000555317 BUB1O43683 1085 aa12.35□□□□□ -0.43
SRP54-206ENST00000555317 PRNPP04156 253 aa12.35□□□□□ -0.43
SRP54-206ENST00000555317 GOT1P17174 413 aa12.35□□□□□ -0.43
SRP54-206ENST00000555317 CYLC1P35663 651 aaPredicted RBP12.35□□□□□ -0.43
SRP54-206ENST00000555317 YBEYP58557 167 aaPredicted RBP12.35□□□□□ -0.43
SRP54-206ENST00000555317 CCDC15Q0P6D6 951 aa12.35□□□□□ -0.43
SRP54-206ENST00000555317 SF3A2Q15428 464 aaKnown RBP12.35□□□□□ -0.43
SRP54-206ENST00000555317 SPA17Q15506 151 aa12.35□□□□□ -0.43
SRP54-206ENST00000555317 CA9Q16790 459 aa12.35□□□□□ -0.43
SRP54-206ENST00000555317 TRIM61Q5EBN2 209 aa12.35□□□□□ -0.43
SRP54-206ENST00000555317 KCNT1Q5JUK3 1230 aa12.35□□□□□ -0.43
SRP54-206ENST00000555317 PLA2G2CQ5R387 149 aa12.35□□□□□ -0.43
SRP54-206ENST00000555317 ZFYVE27Q5T4F4 411 aa12.35□□□□□ -0.43
SRP54-206ENST00000555317 DAB2IPQ5VWQ8 1189 aa12.35□□□□□ -0.43
SRP54-206ENST00000555317 RHOT2Q8IXI1 618 aa12.35□□□□□ -0.43
SRP54-206ENST00000555317 RYBPQ8N488 228 aaPredicted RBP12.35□□□□□ -0.43
SRP54-206ENST00000555317 HDDC3Q8N4P3 179 aa12.35□□□□□ -0.43
SRP54-206ENST00000555317 ARFGAP1Q8N6T3 406 aa12.35□□□□□ -0.43
SRP54-206ENST00000555317 PCDH20Q8N6Y1 951 aaKnown RBP12.35□□□□□ -0.43
SRP54-206ENST00000555317 TC2NQ8N9U0 490 aa12.35□□□□□ -0.43
SRP54-206ENST00000555317 TEKT4Q8WW24 435 aa12.35□□□□□ -0.43
SRP54-206ENST00000555317 ZNF419Q96HQ0 510 aaPredicted RBP12.35□□□□□ -0.43
SRP54-206ENST00000555317 PPP1R16AQ96I34 528 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms