RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 BST2Q10589 180 aaKnown RBP10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 DGKDQ16760 1214 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 DUSP28Q4G0W2 176 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 KCTD21Q4G0X4 260 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 MARCH8Q5T0T0 291 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 LDLRAD1Q5T700 205 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 NOTUMQ6P988 496 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 PSTKQ8IV42 348 aaKnown RBP10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 UNC5BQ8IZJ1 945 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 CRYBG2Q8N1P7 616 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 TMEM130Q8N3G9 435 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 ANKRD52Q8NB46 1076 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 PIWIL1Q96J94 861 aaKnown RBP10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 HSFY1Q96LI6 401 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 LENG8Q96PV6 779 aaPredicted RBP10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 C11orf84Q9BUA3 381 aaPredicted RBP10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 COPS7BQ9H9Q2 264 aaPredicted RBP10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 RCOR3Q9P2K3 495 aaPredicted RBP10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 VTI1BQ9UEU0 232 aa10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 UBQLN1Q9UMX0 589 aaKnown RBP10.89□□□□□ -0.67
MTHFD1-210ENST00000555252 RALGAPA2Q2PPJ7 1873 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 DYTNA2CJ06 578 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 MATN2O00339 956 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 HSPA4LO95757 839 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 APOA4P06727 396 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 MMP3P08254 477 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 HMOX2P30519 316 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 PPARGP37231 505 aaPredicted RBP10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 PNPLA4P41247 253 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 THOP1P52888 689 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 ESRRGP62508 458 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 FRG1Q14331 258 aaKnown RBP10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 GJC2Q5T442 439 aaPredicted RBP10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 C6orf52Q5T4I8 152 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 GRTP1Q5TC63 336 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 IQSEC1Q6DN90 963 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 STRADAQ7RTN6 431 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 CATSPER4Q7RTX7 472 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 ANKRD23Q86SG2 305 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 AMIGO2Q86SJ2 522 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 SCUBE3Q8IX30 993 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 LILRA2Q8N149 483 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 BHLHE22Q8NFJ8 381 aaPredicted RBP10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 OR6B3Q8NGW1 331 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 RDH11Q8TC12 318 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 BORCS5Q969J3 196 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 SLC10A4Q96EP9 437 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 ZNF560Q96MR9 790 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 QKIQ96PU8 341 aaKnown RBP eCLIP10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 CDRT15Q96T59 188 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 CPNE1Q99829 537 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 PKP2Q99959 881 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 ADAMTS10Q9H324 1103 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 ZNF385DQ9H6B1 395 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 EFCAB1Q9HAE3 211 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 TBC1D23Q9NUY8 699 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 GPATCH2LQ9NWQ4 482 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 SNTG2Q9NY99 539 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 UTP6Q9NYH9 597 aaKnown RBP10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 RNF181Q9P0P0 153 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 SUCOQ9UBS9 1254 aaKnown RBP10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 EVPLQ92817 2033 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 TRIP11Q15643 1979 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 SBF1O95248 1867 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 ARHGEF37A1IGU5 675 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 TRIM38O00635 465 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 ACOT8O14734 319 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 MPOP05164 745 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 PGAM1P18669 254 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 XRCC1P18887 633 aaPredicted RBP10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 HOXA11P31270 313 aaPredicted RBP10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 GP5P40197 560 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 NRLP54845 237 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 CDKL1Q00532 357 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 RAB6CQ53S08 254 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 C1QTNF12Q5T7M4 302 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 C9orf57Q5W0N0 161 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 OR6J1Q8NGC5 347 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 ZNF420Q8TAQ5 688 aaPredicted RBP10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 SLC7A14Q8TBB6 771 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 ASB9Q96DX5 294 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 RMND5BQ96G75 393 aaPredicted RBP10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 COX4I2Q96KJ9 171 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 RANBP9Q96S59 729 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 UHRF1Q96T88 793 aaPredicted RBP10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 ANKRD60Q9BZ19 345 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 RAB6CQ9H0N0 254 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 GDAP2Q9NXN4 497 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 TUBGCP4Q9UGJ1 667 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 IPO11Q9UI26 975 aaKnown RBP10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 RAP2CQ9Y3L5 183 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 CROCCQ5TZA2 2017 aa10.88□□□□□ -0.67
MTHFD1-210ENST00000555252 A0A087WXM4 84 aa10.87□□□□□ -0.67
MTHFD1-210ENST00000555252 SMIM35A0A1B0GVV1 85 aa10.87□□□□□ -0.67
MTHFD1-210ENST00000555252 AIM2O14862 343 aa10.87□□□□□ -0.67
MTHFD1-210ENST00000555252 HDAC3O15379 428 aa10.87□□□□□ -0.67
MTHFD1-210ENST00000555252 TRIM13O60858 407 aa10.87□□□□□ -0.67
MTHFD1-210ENST00000555252 SNAI1O95863 264 aaPredicted RBP10.87□□□□□ -0.67
MTHFD1-210ENST00000555252 VARSP26640 1264 aaKnown RBP10.87□□□□□ -0.67
MTHFD1-210ENST00000555252 TYK2P29597 1187 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms