RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 ATP9BO43861 1147 aa16.77■□□□□ 0.28
SPTLC2-203ENST00000554901 CHRM1P11229 460 aaPredicted RBP16.77■□□□□ 0.28
SPTLC2-203ENST00000554901 RPS9P46781 194 aaKnown RBP16.77■□□□□ 0.28
SPTLC2-203ENST00000554901 SERPINH1P50454 418 aaKnown RBP16.77■□□□□ 0.28
SPTLC2-203ENST00000554901 TUBB2AQ13885 445 aa16.77■□□□□ 0.28
SPTLC2-203ENST00000554901 HNRNPDQ14103 355 aaKnown RBP16.77■□□□□ 0.28
SPTLC2-203ENST00000554901 SFTPA1Q8IWL2 248 aa16.77■□□□□ 0.28
SPTLC2-203ENST00000554901 SH2D3CQ8N5H7 860 aa16.77■□□□□ 0.28
SPTLC2-203ENST00000554901 CCNYQ8ND76 341 aa16.77■□□□□ 0.28
SPTLC2-203ENST00000554901 KIF18AQ8NI77 898 aa16.77■□□□□ 0.28
SPTLC2-203ENST00000554901 USP33Q8TEY7 942 aa16.77■□□□□ 0.28
SPTLC2-203ENST00000554901 TFB1MQ8WVM0 346 aaKnown RBP16.77■□□□□ 0.28
SPTLC2-203ENST00000554901 NUP205Q92621 2012 aa16.77■□□□□ 0.28
SPTLC2-203ENST00000554901 ISG20Q96AZ6 181 aaKnown RBP16.77■□□□□ 0.28
SPTLC2-203ENST00000554901 MRGPRX3Q96LB0 322 aa16.77■□□□□ 0.28
SPTLC2-203ENST00000554901 FERMT1Q9BQL6 677 aa16.77■□□□□ 0.28
SPTLC2-203ENST00000554901 TUBB2BQ9BVA1 445 aa16.77■□□□□ 0.28
SPTLC2-203ENST00000554901 CEP44Q9C0F1 390 aa16.77■□□□□ 0.28
SPTLC2-203ENST00000554901 LMAN1LQ9HAT1 526 aa16.77■□□□□ 0.28
SPTLC2-203ENST00000554901 SAE1Q9UBE0 346 aaPredicted RBP16.77■□□□□ 0.28
SPTLC2-203ENST00000554901 UBA2Q9UBT2 640 aaPredicted RBP16.77■□□□□ 0.28
SPTLC2-203ENST00000554901 AMACRQ9UHK6 382 aa16.77■□□□□ 0.28
SPTLC2-203ENST00000554901 SIT1Q9Y3P8 196 aa16.77■□□□□ 0.28
SPTLC2-203ENST00000554901 TCRBV7S2A1N4TA0A589 114 aa16.76■□□□□ 0.27
SPTLC2-203ENST00000554901 CHURC1-FNTBB4DL54 471 aa16.76■□□□□ 0.27
SPTLC2-203ENST00000554901 J3KR12 359 aa16.76■□□□□ 0.27
SPTLC2-203ENST00000554901 MATN3O15232 486 aa16.76■□□□□ 0.27
SPTLC2-203ENST00000554901 GLDCP23378 1020 aa16.76■□□□□ 0.27
SPTLC2-203ENST00000554901 FZD5Q13467 585 aa16.76■□□□□ 0.27
SPTLC2-203ENST00000554901 ZNF234Q14588 700 aa16.76■□□□□ 0.27
SPTLC2-203ENST00000554901 PRKD1Q15139 912 aaPredicted RBP16.76■□□□□ 0.27
SPTLC2-203ENST00000554901 CCNG2Q16589 344 aa16.76■□□□□ 0.27
SPTLC2-203ENST00000554901 SDE2Q6IQ49 451 aa16.76■□□□□ 0.27
SPTLC2-203ENST00000554901 DRICH1Q6PGQ1 229 aaPredicted RBP16.76■□□□□ 0.27
SPTLC2-203ENST00000554901 CREG2Q8IUH2 290 aa16.76■□□□□ 0.27
SPTLC2-203ENST00000554901 CCDC13Q8IYE1 715 aa16.76■□□□□ 0.27
SPTLC2-203ENST00000554901 MYO19Q96H55 970 aa16.76■□□□□ 0.27
SPTLC2-203ENST00000554901 FOXQ1Q9C009 403 aa16.76■□□□□ 0.27
SPTLC2-203ENST00000554901 TMEM245Q9H330 911 aa16.76■□□□□ 0.27
SPTLC2-203ENST00000554901 HAUS2Q9NVX0 235 aa16.76■□□□□ 0.27
SPTLC2-203ENST00000554901 TMEM221A6NGB7 291 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 M0R296 226 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 TNFRSF10AO00220 468 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 STK25O00506 426 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 ATG13O75143 517 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 RNF40O75150 1001 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 MAP3K6O95382 1288 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 CD160O95971 181 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 SRCP12931 536 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 NTSR1P30989 418 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 PAFAH1B1P43034 410 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 CTSOP43234 321 aaPredicted RBP16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 RENBPP51606 427 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 EIF3EP60228 445 aaKnown RBP16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 SIX1Q15475 284 aaPredicted RBP16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 FNDC3BQ53EP0 1204 aaKnown RBP16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 SLC45A4Q5BKX6 768 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 EGFLAMQ63HQ2 1017 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 ARHGAP36Q6ZRI8 547 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 BMP8AQ7Z5Y6 402 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 CDKL3Q8IVW4 592 aaPredicted RBP16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 PLPP6Q8IY26 295 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 CCDC105Q8IYK2 499 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 CHPFQ8IZ52 775 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 BBS5Q8N3I7 341 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 ATP11CQ8NB49 1132 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 NETO2Q8NC67 525 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 SLC35B2Q8TB61 432 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 CYB5D2Q8WUJ1 264 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 SORCS1Q8WY21 1168 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 MAML1Q92585 1016 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 NKD2Q969F2 451 aaPredicted RBP16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 MS4A14Q96JA4 679 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 RPL10LQ96L21 214 aaKnown RBP16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 QKIQ96PU8 341 aaKnown RBP eCLIP16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 LGMNQ99538 433 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 GABRG3Q99928 467 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 SUN2Q9UH99 717 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 HCN2Q9UL51 889 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 TECTAO75443 2155 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 GOLGA6L10A0A0M3HER8 536 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 BCLAF3A2AJT9 711 aaKnown RBP16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 CFAP69A5D8W1 941 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 ZNF185O15231 689 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 PEX11BO96011 259 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 MT-CO1P00395 513 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 RBP3P10745 1247 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 TIE1P35590 1138 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 HSPA9P38646 679 aaKnown RBP16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 CLCN5P51795 746 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 IFI35P80217 286 aaPredicted RBP16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 EMC10Q5UCC4 262 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 MARC1Q5VT66 337 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 SERPINA13PQ6UXR4 307 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 LINGO4Q6UY18 593 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 ZC3H18Q86VM9 953 aaKnown RBP16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 TEX26Q8N6G2 289 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 PCDH20Q8N6Y1 951 aaKnown RBP16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 IL17RCQ8NAC3 791 aa16.75■□□□□ 0.27
SPTLC2-203ENST00000554901 FLCNQ8NFG4 579 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms