RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 BZW1Q7L1Q6 419 aaKnown RBP11.4□□□□□ -0.58
SRP54-205ENST00000554803 CLNKQ7Z7G1 428 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 PDZD3Q86UT5 571 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.4□□□□□ -0.58
SRP54-205ENST00000554803 SLC4A11Q8NBS3 891 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 SLC44A1Q8WWI5 657 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 TCEAL3Q969E4 200 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 RTP4Q96DX8 246 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 MSANTD3Q96H12 275 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 ANKRD36BP1Q96IX9 119 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 ZC3H10Q96K80 434 aaKnown RBP11.4□□□□□ -0.58
SRP54-205ENST00000554803 PPP1R10Q96QC0 940 aaKnown RBP11.4□□□□□ -0.58
SRP54-205ENST00000554803 TBCBQ99426 244 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 PAIP2Q9BPZ3 127 aaKnown RBP11.4□□□□□ -0.58
SRP54-205ENST00000554803 BTBD10Q9BSF8 475 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 VCXQ9H320 206 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 MANSC1Q9H8J5 431 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 VRTNQ9H8Y1 702 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 CISHQ9NSE2 258 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 KCNK4Q9NYG8 393 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 PAK5Q9P286 719 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 STK38LQ9Y2H1 464 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 MSRB2Q9Y3D2 182 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 C2CD2Q9Y426 696 aa11.4□□□□□ -0.58
SRP54-205ENST00000554803 MYO18BQ8IUG5 2567 aa11.39□□□□□ -0.59
SRP54-205ENST00000554803 C3orf70A6NLC5 250 aaPredicted RBP11.39□□□□□ -0.59
SRP54-205ENST00000554803 F8W8V4 182 aa11.39□□□□□ -0.59
SRP54-205ENST00000554803 NRG2O14511 850 aaPredicted RBP11.39□□□□□ -0.59
SRP54-205ENST00000554803 STAU1O95793 577 aaKnown RBP11.39□□□□□ -0.59
SRP54-205ENST00000554803 ERBB2P04626 1255 aa11.39□□□□□ -0.59
SRP54-205ENST00000554803 INHBAP08476 426 aa11.39□□□□□ -0.59
SRP54-205ENST00000554803 KRT3P12035 628 aa11.39□□□□□ -0.59
SRP54-205ENST00000554803 PSMC3P17980 439 aa11.39□□□□□ -0.59
SRP54-205ENST00000554803 TGM2P21980 687 aa11.39□□□□□ -0.59
SRP54-205ENST00000554803 KDELR1P24390 212 aa11.39□□□□□ -0.59
SRP54-205ENST00000554803 IGFBP6P24592 240 aaPredicted RBP11.39□□□□□ -0.59
SRP54-205ENST00000554803 PSMA2P25787 234 aa11.39□□□□□ -0.59
SRP54-205ENST00000554803 SH3BGRP55822 239 aaPredicted RBP11.39□□□□□ -0.59
SRP54-205ENST00000554803 MYL6P60660 151 aa11.39□□□□□ -0.59
SRP54-205ENST00000554803 CDK16Q00536 496 aa11.39□□□□□ -0.59
SRP54-205ENST00000554803 OTUD4Q01804 1114 aaKnown RBP11.39□□□□□ -0.59
SRP54-205ENST00000554803 ELAVL2Q12926 359 aaKnown RBP11.39□□□□□ -0.59
SRP54-205ENST00000554803 NAB1Q13506 487 aa11.39□□□□□ -0.59
SRP54-205ENST00000554803 PDK2Q15119 407 aa11.39□□□□□ -0.59
SRP54-205ENST00000554803 WDR72Q3MJ13 1102 aa11.39□□□□□ -0.59
SRP54-205ENST00000554803 FAM78AQ5JUQ0 283 aa11.39□□□□□ -0.59
SRP54-205ENST00000554803 DGKKQ5KSL6 1271 aa11.39□□□□□ -0.59
SRP54-205ENST00000554803 C6orf163Q5TEZ5 329 aa11.39□□□□□ -0.59
SRP54-205ENST00000554803 TTC39BQ5VTQ0 682 aaPredicted RBP11.39□□□□□ -0.59
SRP54-205ENST00000554803 VITQ6UXI7 678 aa11.39□□□□□ -0.59
SRP54-205ENST00000554803 FAM47EQ6ZV65 393 aa11.39□□□□□ -0.59
SRP54-205ENST00000554803 OTOAQ7RTW8 1153 aa11.39□□□□□ -0.59
SRP54-205ENST00000554803 NT5DC4Q86YG4 428 aa11.39□□□□□ -0.59
SRP54-205ENST00000554803 FAM13CQ8NE31 585 aa11.39□□□□□ -0.59
SRP54-205ENST00000554803 MZB1Q8WU39 189 aa11.39□□□□□ -0.59
SRP54-205ENST00000554803 DEPDC1BQ8WUY9 529 aa11.39□□□□□ -0.59
SRP54-205ENST00000554803 CPT1BQ92523 772 aa11.39□□□□□ -0.59
SRP54-205ENST00000554803 SLC7A6OSQ96CW6 309 aaPredicted RBP11.39□□□□□ -0.59
SRP54-205ENST00000554803 NSL1Q96IY1 281 aa11.39□□□□□ -0.59
SRP54-205ENST00000554803 C7orf26Q96N11 449 aa11.39□□□□□ -0.59
SRP54-205ENST00000554803 ASB16Q96NS5 453 aa11.39□□□□□ -0.59
SRP54-205ENST00000554803 NUDCD1Q96RS6 583 aa11.39□□□□□ -0.59
SRP54-205ENST00000554803 TSSK1BQ9BXA7 367 aa11.39□□□□□ -0.59
SRP54-205ENST00000554803 TBC1D10AQ9BXI6 508 aa11.39□□□□□ -0.59
SRP54-205ENST00000554803 DNAI2Q9GZS0 605 aa11.39□□□□□ -0.59
SRP54-205ENST00000554803 IQCGQ9H095 443 aaKnown RBP11.39□□□□□ -0.59
SRP54-205ENST00000554803 DPP3Q9NY33 737 aa11.39□□□□□ -0.59
SRP54-205ENST00000554803 DERAQ9Y315 318 aa11.39□□□□□ -0.59
SRP54-205ENST00000554803 GPSM3Q9Y4H4 160 aa11.39□□□□□ -0.59
SRP54-205ENST00000554803 CFAP46Q8IYW2 2715 aa11.39□□□□□ -0.59
SRP54-205ENST00000554803 GON4LQ3T8J9 2241 aa11.39□□□□□ -0.59
SRP54-205ENST00000554803 MYO16Q9Y6X6 1858 aa11.38□□□□□ -0.59
SRP54-205ENST00000554803 KIAA1549LQ6ZVL6 1849 aa11.38□□□□□ -0.59
SRP54-205ENST00000554803 I3L4J1 428 aa11.38□□□□□ -0.59
SRP54-205ENST00000554803 ARNTLO00327 626 aa11.38□□□□□ -0.59
SRP54-205ENST00000554803 BIRC5O15392 142 aa11.38□□□□□ -0.59
SRP54-205ENST00000554803 MAGEC1O60732 1142 aa11.38□□□□□ -0.59
SRP54-205ENST00000554803 PEX11AO75192 247 aa11.38□□□□□ -0.59
SRP54-205ENST00000554803 SMNDC1O75940 238 aaKnown RBP eCLIP11.38□□□□□ -0.59
SRP54-205ENST00000554803 CAPNS1P04632 268 aa11.38□□□□□ -0.59
SRP54-205ENST00000554803 THP07101 528 aa11.38□□□□□ -0.59
SRP54-205ENST00000554803 KRT19P08727 400 aa11.38□□□□□ -0.59
SRP54-205ENST00000554803 TPBGLP0DKB5 382 aa11.38□□□□□ -0.59
SRP54-205ENST00000554803 SETSIPP0DME0 302 aa11.38□□□□□ -0.59
SRP54-205ENST00000554803 VHLP40337 213 aa11.38□□□□□ -0.59
SRP54-205ENST00000554803 NEK3P51956 506 aa11.38□□□□□ -0.59
SRP54-205ENST00000554803 ARFIP2P53365 341 aa11.38□□□□□ -0.59
SRP54-205ENST00000554803 TUSC3Q13454 348 aa11.38□□□□□ -0.59
SRP54-205ENST00000554803 RAB33AQ14088 237 aa11.38□□□□□ -0.59
SRP54-205ENST00000554803 GSTA3Q16772 222 aa11.38□□□□□ -0.59
SRP54-205ENST00000554803 ZNF699Q32M78 642 aa11.38□□□□□ -0.59
SRP54-205ENST00000554803 ACCSLQ4AC99 568 aa11.38□□□□□ -0.59
SRP54-205ENST00000554803 PRSS36Q5K4E3 855 aa11.38□□□□□ -0.59
SRP54-205ENST00000554803 FAM171A1Q5VUB5 890 aa11.38□□□□□ -0.59
SRP54-205ENST00000554803 CAPRIN2Q6IMN6 1127 aaKnown RBP11.38□□□□□ -0.59
SRP54-205ENST00000554803 IRGCQ6NXR0 463 aa11.38□□□□□ -0.59
SRP54-205ENST00000554803 ZNF449Q6P9G9 518 aa11.38□□□□□ -0.59
SRP54-205ENST00000554803 C3orf62Q6ZUJ4 267 aa11.38□□□□□ -0.59
SRP54-205ENST00000554803 ARCQ7LC44 396 aa11.38□□□□□ -0.59
SRP54-205ENST00000554803 SLC26A11Q86WA9 606 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms