RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 CD207Q9UJ71 328 aa5.48□□□□□ -1.53
SCFD1-211ENST00000554437 TRBV5-7A0A0A0MS05 114 aa5.47□□□□□ -1.53
SCFD1-211ENST00000554437 IGLV5-39A0A0G2JS06 123 aa5.47□□□□□ -1.53
SCFD1-211ENST00000554437 EPN2O95208 641 aa5.47□□□□□ -1.53
SCFD1-211ENST00000554437 CBX6O95503 412 aa5.47□□□□□ -1.53
SCFD1-211ENST00000554437 SYF2O95926 243 aaKnown RBP5.47□□□□□ -1.53
SCFD1-211ENST00000554437 LMO1P25800 156 aa5.47□□□□□ -1.53
SCFD1-211ENST00000554437 CNTFP26441 200 aa5.47□□□□□ -1.53
SCFD1-211ENST00000554437 LAMB3Q13751 1172 aa5.47□□□□□ -1.53
SCFD1-211ENST00000554437 MAP3K21Q5TCX8 1036 aa5.47□□□□□ -1.53
SCFD1-211ENST00000554437 NUGGCQ68CJ6 796 aa5.47□□□□□ -1.53
SCFD1-211ENST00000554437 TRAPPC11Q7Z392 1133 aa5.47□□□□□ -1.53
SCFD1-211ENST00000554437 IRF2BP2Q7Z5L9 587 aa5.47□□□□□ -1.53
SCFD1-211ENST00000554437 LRRTM4Q86VH4 590 aa5.47□□□□□ -1.53
SCFD1-211ENST00000554437 CPOQ8IVL8 374 aa5.47□□□□□ -1.53
SCFD1-211ENST00000554437 TMEM199Q8N511 208 aa5.47□□□□□ -1.53
SCFD1-211ENST00000554437 SCARB1Q8WTV0 552 aa5.47□□□□□ -1.53
SCFD1-211ENST00000554437 FAR1Q8WVX9 515 aa5.47□□□□□ -1.53
SCFD1-211ENST00000554437 PPM1EQ8WY54 764 aa5.47□□□□□ -1.53
SCFD1-211ENST00000554437 FRG2BQ96QU4 278 aa5.47□□□□□ -1.53
SCFD1-211ENST00000554437 STN1Q9H668 368 aaKnown RBP5.47□□□□□ -1.53
SCFD1-211ENST00000554437 TASP1Q9H6P5 420 aa5.47□□□□□ -1.53
SCFD1-211ENST00000554437 FZD3Q9NPG1 666 aa5.47□□□□□ -1.53
SCFD1-211ENST00000554437 RNF146Q9NTX7 359 aa5.47□□□□□ -1.53
SCFD1-211ENST00000554437 ICKQ9UPZ9 632 aa5.47□□□□□ -1.53
SCFD1-211ENST00000554437 OR6C68A6NDL8 312 aa5.46□□□□□ -1.54
SCFD1-211ENST00000554437 C17orf100A8MU93 164 aa5.46□□□□□ -1.54
SCFD1-211ENST00000554437 H3BNX3 289 aa5.46□□□□□ -1.54
SCFD1-211ENST00000554437 HBP1O60381 514 aa5.46□□□□□ -1.54
SCFD1-211ENST00000554437 TMCC1O94876 653 aa5.46□□□□□ -1.54
SCFD1-211ENST00000554437 DDAH2O95865 285 aa5.46□□□□□ -1.54
SCFD1-211ENST00000554437 PSG1P11464 419 aa5.46□□□□□ -1.54
SCFD1-211ENST00000554437 PRKCHP24723 683 aa5.46□□□□□ -1.54
SCFD1-211ENST00000554437 HNF1BP35680 557 aa5.46□□□□□ -1.54
SCFD1-211ENST00000554437 GJC1P36383 396 aa5.46□□□□□ -1.54
SCFD1-211ENST00000554437 MTNR1AP48039 350 aa5.46□□□□□ -1.54
SCFD1-211ENST00000554437 FOXD4Q12950 439 aaPredicted RBP5.46□□□□□ -1.54
SCFD1-211ENST00000554437 PRTGQ2VWP7 1150 aa5.46□□□□□ -1.54
SCFD1-211ENST00000554437 ASPHD1Q5U4P2 390 aa5.46□□□□□ -1.54
SCFD1-211ENST00000554437 CLEC4GQ6UXB4 293 aa5.46□□□□□ -1.54
SCFD1-211ENST00000554437 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.46□□□□□ -1.54
SCFD1-211ENST00000554437 GPSM1Q86YR5 675 aa5.46□□□□□ -1.54
SCFD1-211ENST00000554437 HERVK_113Q902F9 699 aa5.46□□□□□ -1.54
SCFD1-211ENST00000554437 MAELQ96JY0 434 aaKnown RBP5.46□□□□□ -1.54
SCFD1-211ENST00000554437 TEFMQ96QE5 360 aaKnown RBP5.46□□□□□ -1.54
SCFD1-211ENST00000554437 NAP1L4Q99733 375 aaKnown RBP5.46□□□□□ -1.54
SCFD1-211ENST00000554437 NPLQ9BXD5 320 aaPredicted RBP5.46□□□□□ -1.54
SCFD1-211ENST00000554437 ZBTB40Q9NUA8 1239 aa5.46□□□□□ -1.54
SCFD1-211ENST00000554437 ZDHHC7Q9NXF8 308 aa5.46□□□□□ -1.54
SCFD1-211ENST00000554437 SAGE1Q9NXZ1 904 aa5.46□□□□□ -1.54
SCFD1-211ENST00000554437 CDH22Q9UJ99 828 aa5.46□□□□□ -1.54
SCFD1-211ENST00000554437 RAP2CQ9Y3L5 183 aa5.46□□□□□ -1.54
SCFD1-211ENST00000554437 SQORQ9Y6N5 450 aa5.46□□□□□ -1.54
SCFD1-211ENST00000554437 SLC4A4Q9Y6R1 1079 aa5.46□□□□□ -1.54
SCFD1-211ENST00000554437 A0A0U1RQG5 324 aaPredicted RBP5.45□□□□□ -1.54
SCFD1-211ENST00000554437 TARSL2A2RTX5 802 aaKnown RBP5.45□□□□□ -1.54
SCFD1-211ENST00000554437 BMP15O95972 392 aa5.45□□□□□ -1.54
SCFD1-211ENST00000554437 IFNA2P01563 188 aa5.45□□□□□ -1.54
SCFD1-211ENST00000554437 POLBP06746 335 aa5.45□□□□□ -1.54
SCFD1-211ENST00000554437 CHRNDQ07001 517 aa5.45□□□□□ -1.54
SCFD1-211ENST00000554437 PTGR1Q14914 329 aa5.45□□□□□ -1.54
SCFD1-211ENST00000554437 TWIST1Q15672 202 aa5.45□□□□□ -1.54
SCFD1-211ENST00000554437 ATG16L1Q676U5 607 aa5.45□□□□□ -1.54
SCFD1-211ENST00000554437 GJB7Q6PEY0 223 aa5.45□□□□□ -1.54
SCFD1-211ENST00000554437 BBS12Q6ZW61 710 aa5.45□□□□□ -1.54
SCFD1-211ENST00000554437 WDR5BQ86VZ2 330 aa5.45□□□□□ -1.54
SCFD1-211ENST00000554437 FAM217AQ8IXS0 508 aa5.45□□□□□ -1.54
SCFD1-211ENST00000554437 TMTC2Q8N394 836 aa5.45□□□□□ -1.54
SCFD1-211ENST00000554437 LRRC57Q8N9N7 239 aa5.45□□□□□ -1.54
SCFD1-211ENST00000554437 USP13Q92995 863 aaPredicted RBP5.45□□□□□ -1.54
SCFD1-211ENST00000554437 SH3KBP1Q96B97 665 aa5.45□□□□□ -1.54
SCFD1-211ENST00000554437 TTC12Q9H892 705 aaPredicted RBP5.45□□□□□ -1.54
SCFD1-211ENST00000554437 MAP6D1Q9H9H5 199 aa5.45□□□□□ -1.54
SCFD1-211ENST00000554437 TBC1D14Q9P2M4 693 aa5.45□□□□□ -1.54
SCFD1-211ENST00000554437 PLEKHB1Q9UF11 243 aaPredicted RBP5.45□□□□□ -1.54
SCFD1-211ENST00000554437 OSGIN2Q9Y236 505 aa5.45□□□□□ -1.54
SCFD1-211ENST00000554437 TNFRSF18Q9Y5U5 241 aa5.45□□□□□ -1.54
SCFD1-211ENST00000554437 A0A0A0MQY5 61 aa5.44□□□□□ -1.54
SCFD1-211ENST00000554437 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.44□□□□□ -1.54
SCFD1-211ENST00000554437 RRN3P2A6NIE6 340 aa5.44□□□□□ -1.54
SCFD1-211ENST00000554437 SH2D7A6NKC9 451 aaPredicted RBP5.44□□□□□ -1.54
SCFD1-211ENST00000554437 MDM4O15151 490 aa5.44□□□□□ -1.54
SCFD1-211ENST00000554437 NPHP1O15259 732 aa5.44□□□□□ -1.54
SCFD1-211ENST00000554437 IGKV2-30P06310 120 aa5.44□□□□□ -1.54
SCFD1-211ENST00000554437 TNFRSF1BP20333 461 aa5.44□□□□□ -1.54
SCFD1-211ENST00000554437 CD72P21854 359 aa5.44□□□□□ -1.54
SCFD1-211ENST00000554437 TNFSF8P32971 234 aa5.44□□□□□ -1.54
SCFD1-211ENST00000554437 PTPN9P43378 593 aa5.44□□□□□ -1.54
SCFD1-211ENST00000554437 CCR5P51681 352 aa5.44□□□□□ -1.54
SCFD1-211ENST00000554437 TMPRSS3P57727 454 aa5.44□□□□□ -1.54
SCFD1-211ENST00000554437 MST1RQ04912 1400 aa5.44□□□□□ -1.54
SCFD1-211ENST00000554437 TBL3Q12788 808 aaKnown RBP5.44□□□□□ -1.54
SCFD1-211ENST00000554437 SYTL3Q4VX76 610 aa5.44□□□□□ -1.54
SCFD1-211ENST00000554437 WDR45BQ5MNZ6 344 aa5.44□□□□□ -1.54
SCFD1-211ENST00000554437 GHDCQ8N2G8 530 aa5.44□□□□□ -1.54
SCFD1-211ENST00000554437 SETD9Q8NE22 299 aa5.44□□□□□ -1.54
SCFD1-211ENST00000554437 HDAC7Q8WUI4 952 aa5.44□□□□□ -1.54
SCFD1-211ENST00000554437 LPAR1Q92633 364 aa5.44□□□□□ -1.54
SCFD1-211ENST00000554437 VCPIP1Q96JH7 1222 aa5.44□□□□□ -1.54
SCFD1-211ENST00000554437 B3GNT4Q9C0J1 378 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms