RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 KRT18P05783 430 aaKnown RBP9.7□□□□□ -0.86
SIX4-202ENST00000554079 ASNSP08243 561 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 RALBP11234 206 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 BMP2P12643 396 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 IMPDH1P20839 514 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 GLDCP23378 1020 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 RBL1P28749 1068 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 SLC7A1P30825 629 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 CYP2C18P33260 490 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 CRHR1P34998 444 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 ARCN1P48444 511 aaKnown RBP9.7□□□□□ -0.86
SIX4-202ENST00000554079 MAP3K7CLP57077 242 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 RHDQ02161 417 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 RAD51Q06609 339 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 NAB1Q13506 487 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 GNA13Q14344 377 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 GALNT3Q14435 633 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 RFTN1Q14699 578 aaPredicted RBP9.7□□□□□ -0.86
SIX4-202ENST00000554079 FASTKD1Q53R41 847 aaKnown RBP9.7□□□□□ -0.86
SIX4-202ENST00000554079 Q5BKY6 102 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 AGAP6Q5VW22 663 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 CCBE1Q6UXH8 406 aaPredicted RBP9.7□□□□□ -0.86
SIX4-202ENST00000554079 SLCO6A1Q86UG4 719 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 SLC26A11Q86WA9 606 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 REXO1Q8N1G1 1221 aaKnown RBP9.7□□□□□ -0.86
SIX4-202ENST00000554079 TP53I13Q8NBR0 393 aaPredicted RBP9.7□□□□□ -0.86
SIX4-202ENST00000554079 TTLQ8NG68 377 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 OR10Z1Q8NGY1 313 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 OR2T3Q8NH03 318 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 GJA10Q969M2 543 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 MARVELD3Q96A59 401 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 SH3KBP1Q96B97 665 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 RCN3Q96D15 328 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 FAM89AQ96GI7 184 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 FBXL20Q96IG2 436 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 MAGED4Q96JG8 741 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 AGAP4Q96P64 663 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 ASB2Q96Q27 587 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 FERD3LQ96RJ6 166 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 CITED4Q96RK1 184 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 ACO2Q99798 780 aaKnown RBP9.7□□□□□ -0.86
SIX4-202ENST00000554079 TM9SF2Q99805 663 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 ACAT2Q9BWD1 397 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 MTMR12Q9C0I1 747 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 NOL11Q9H8H0 719 aaKnown RBP9.7□□□□□ -0.86
SIX4-202ENST00000554079 WDR41Q9HAD4 459 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 TRIM39Q9HCM9 518 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 PNPLA8Q9NP80 782 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 POLMQ9NP87 494 aaPredicted RBP9.7□□□□□ -0.86
SIX4-202ENST00000554079 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.7□□□□□ -0.86
SIX4-202ENST00000554079 NPAP1Q9NZP6 1156 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 IFT80Q9P2H3 777 aaPredicted RBP9.7□□□□□ -0.86
SIX4-202ENST00000554079 TCRBV7S3A2A0A539 114 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 RGSL1A5PLK6 1076 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 PHGDHO43175 533 aaKnown RBP9.7□□□□□ -0.86
SIX4-202ENST00000554079 ABCB7O75027 752 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 UPK1BO75841 260 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 VAPBO95292 243 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 NDST3O95803 873 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 PRLP01236 227 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 GSNP06396 782 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 P4HBP07237 508 aaKnown RBP9.7□□□□□ -0.86
SIX4-202ENST00000554079 TGFB3P10600 412 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 CD58P19256 250 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 SERPINB5P36952 375 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 HTR2BP41595 481 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 YAP1P46937 504 aaKnown RBP9.7□□□□□ -0.86
SIX4-202ENST00000554079 POLD2P49005 469 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 PLA2G16P53816 162 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 DYNLL1P63167 89 aaKnown RBP9.7□□□□□ -0.86
SIX4-202ENST00000554079 MRPS15P82914 257 aaKnown RBP9.7□□□□□ -0.86
SIX4-202ENST00000554079 TNFAIP2Q03169 654 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 INTS11Q5TA45 600 aaKnown RBP9.7□□□□□ -0.86
SIX4-202ENST00000554079 PLA2G4FQ68DD2 849 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 DESI1Q6ICB0 168 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 ACAD10Q6JQN1 1059 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 ERAP2Q6P179 960 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 PMF1Q6P1K2 205 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 TATDN1Q6P1N9 297 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 METTL2BQ6P1Q9 378 aaKnown RBP9.7□□□□□ -0.86
SIX4-202ENST00000554079 LMOD2Q6P5Q4 547 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 FAM171BQ6P995 826 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 CTAGE3PQ8IX95 158 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 FAM71AQ8IYT1 594 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 ADGRF2Q8IZF7 708 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 FAM156AQ8NDB6 213 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 LHFPL5Q8TAF8 219 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 CDKL2Q92772 493 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 APBB2Q92870 758 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 KAT5Q92993 513 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 ASB9Q96DX5 294 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 RNF170Q96K19 258 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 CNDP1Q96KN2 507 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 C17orf62Q9BQA9 187 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 REEP2Q9BRK0 252 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 GON7Q9BXV9 100 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 TMEM117Q9H0C3 514 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 EHMT1Q9H9B1 1298 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 CD320Q9NPF0 282 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 WASH6PQ9NQA3 447 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms