RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 TBC1D3KA0A087X1G2 549 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 ILVBLA1L0T0 632 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 TBC1D3FA6NER0 549 aaPredicted RBP6.77□□□□□ -1.33
SLIRP-203ENST00000554074 TBC1D3LB9A6J9 549 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 PRAMEF26H0Y7S4 382 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 TLR4O00206 839 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 TAF4O00268 1085 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 RTN2O75298 545 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 CNTN5O94779 1100 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 PRNPP04156 253 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 CYP1A1P04798 512 aaPredicted RBP6.77□□□□□ -1.33
SLIRP-203ENST00000554074 RHOCP08134 193 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 TBC1D3HP0C7X1 549 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 SRCP12931 536 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 TFE3P19532 575 aaPredicted RBP6.77□□□□□ -1.33
SLIRP-203ENST00000554074 MMP8P22894 467 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 EPHA8P29322 1005 aaPredicted RBP6.77□□□□□ -1.33
SLIRP-203ENST00000554074 GSCP56915 257 aaPredicted RBP6.77□□□□□ -1.33
SLIRP-203ENST00000554074 NXPH1P58417 271 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 RNASE9P60153 205 aaKnown RBP6.77□□□□□ -1.33
SLIRP-203ENST00000554074 PPP2CBP62714 309 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 PPP2CAP67775 309 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 NOMO3P69849 1222 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 CDR2Q01850 454 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 NRG1Q02297 640 aaPredicted RBP6.77□□□□□ -1.33
SLIRP-203ENST00000554074 SLC20A2Q08357 652 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 SCAPQ12770 1279 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 CNTN1Q12860 1018 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 SHBQ15464 509 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 SMAD1Q15797 465 aaKnown RBP6.77□□□□□ -1.33
SLIRP-203ENST00000554074 ACCSLQ4AC99 568 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 SETMARQ53H47 684 aaPredicted RBP6.77□□□□□ -1.33
SLIRP-203ENST00000554074 ALFQ53S48 1182 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 ARTNQ5T4W7 220 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 FAM102AQ5T9C2 384 aaPredicted RBP6.77□□□□□ -1.33
SLIRP-203ENST00000554074 AGBL4Q5VU57 503 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 SFMBT2Q5VUG0 894 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 CDKAL1Q5VV42 579 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 TBC1D3GQ6DHY5 549 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 TBC1D3CQ6IPX1 549 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 TRNP1Q6NT89 227 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 TRIM72Q6ZMU5 477 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 Q6ZVU0 165 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 NOP9Q86U38 636 aaKnown RBP6.77□□□□□ -1.33
SLIRP-203ENST00000554074 ZSCAN30Q86W11 494 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 TMPRSS12Q86WS5 348 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 TBC1D3Q8IZP1 549 aaPredicted RBP6.77□□□□□ -1.33
SLIRP-203ENST00000554074 PNPLA1Q8N8W4 532 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 OR2A12Q8NGT7 310 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 FAM174AQ8TBP5 190 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 PIP4K2CQ8TBX8 421 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 TBCBQ99426 244 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 CEP44Q9C0F1 390 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 NAT10Q9H0A0 1025 aaKnown RBP6.77□□□□□ -1.33
SLIRP-203ENST00000554074 SIK2Q9H0K1 926 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 MUC3BQ9H195 1237 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 GANQ9H2C0 597 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 CCDC86Q9H6F5 360 aaKnown RBP6.77□□□□□ -1.33
SLIRP-203ENST00000554074 ANLNQ9NQW6 1124 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 SAMSN1Q9NSI8 373 aaKnown RBP6.77□□□□□ -1.33
SLIRP-203ENST00000554074 FTSJ1Q9UET6 329 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 VPS51Q9UID3 782 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 NOCTQ9UK39 431 aaKnown RBP6.77□□□□□ -1.33
SLIRP-203ENST00000554074 SARDHQ9UL12 918 aa6.77□□□□□ -1.33
SLIRP-203ENST00000554074 ITPR1Q14643 2758 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 LRP4O75096 1905 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 ASPMQ8IZT6 3477 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 WDFY3Q8IZQ1 3526 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 PES1O00541 588 aaKnown RBP6.76□□□□□ -1.33
SLIRP-203ENST00000554074 KCNK3O14649 394 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 ENC1O14682 589 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 WNT9AO14904 365 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 SNAP91O60641 907 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 ZMPSTE24O75844 475 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 MT-CO1P00395 513 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 ITGAVP06756 1048 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 CTSLP07711 333 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 TPM2P07951 284 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 MMEP08473 750 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 ZNF18P17022 549 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 OR1E1P30953 314 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 CHRNA3P32297 505 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 SOX5P35711 763 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 FLT3P36888 993 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 ETFBP38117 255 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 GGCXP38435 758 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 PTPN9P43378 593 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 METAP1P53582 386 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 JAM2P57087 298 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 TAS2R38P59533 333 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 ILKQ13418 452 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 CAMK2BQ13554 666 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 KRT31Q15323 416 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 NFKBIBQ15653 356 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 STX1AQ16623 288 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 HSP90AA4PQ58FG1 418 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 PIP5KL1Q5T9C9 394 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 MANEALQ5VSG8 457 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 TAF3Q5VWG9 929 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 RETSATQ6NUM9 610 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms