RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 RNASEH1O60930 286 aaKnown RBP14.13□□□□□ -0.15
TUBB3-202ENST00000553656 ZMPSTE24O75844 475 aa14.13□□□□□ -0.15
TUBB3-202ENST00000553656 SP9P0CG40 484 aa14.13□□□□□ -0.15
TUBB3-202ENST00000553656 SRCP12931 536 aa14.13□□□□□ -0.15
TUBB3-202ENST00000553656 COL9A1P20849 921 aa14.13□□□□□ -0.15
TUBB3-202ENST00000553656 HOXA6P31267 233 aa14.13□□□□□ -0.15
TUBB3-202ENST00000553656 MARCKSL1P49006 195 aa14.13□□□□□ -0.15
TUBB3-202ENST00000553656 PTPN5P54829 565 aa14.13□□□□□ -0.15
TUBB3-202ENST00000553656 CAMK2GQ13555 558 aaPredicted RBP14.13□□□□□ -0.15
TUBB3-202ENST00000553656 PAFAH1B3Q15102 231 aaKnown RBP14.13□□□□□ -0.15
TUBB3-202ENST00000553656 DLG2Q15700 870 aa14.13□□□□□ -0.15
TUBB3-202ENST00000553656 TFDP3Q5H9I0 405 aa14.13□□□□□ -0.15
TUBB3-202ENST00000553656 AFMIDQ63HM1 303 aa14.13□□□□□ -0.15
TUBB3-202ENST00000553656 NCBP2-AS2Q69YL0 99 aa14.13□□□□□ -0.15
TUBB3-202ENST00000553656 KIAA1211LQ6NV74 962 aa14.13□□□□□ -0.15
TUBB3-202ENST00000553656 ZC3H14Q6PJT7 736 aaKnown RBP14.13□□□□□ -0.15
TUBB3-202ENST00000553656 MFSD7Q6UXD7 560 aa14.13□□□□□ -0.15
TUBB3-202ENST00000553656 KIAA1324Q6UXG2 1013 aaKnown RBP14.13□□□□□ -0.15
TUBB3-202ENST00000553656 SPOCD1Q6ZMY3 1216 aa14.13□□□□□ -0.15
TUBB3-202ENST00000553656 ARHGAP12Q8IWW6 846 aa14.13□□□□□ -0.15
TUBB3-202ENST00000553656 MAML2Q8IZL2 1156 aaPredicted RBP14.13□□□□□ -0.15
TUBB3-202ENST00000553656 TRIM58Q8NG06 486 aa14.13□□□□□ -0.15
TUBB3-202ENST00000553656 OR2T3Q8NH03 318 aa14.13□□□□□ -0.15
TUBB3-202ENST00000553656 NSMCE1Q8WV22 266 aa14.13□□□□□ -0.15
TUBB3-202ENST00000553656 CASKIN2Q8WXE0 1202 aa14.13□□□□□ -0.15
TUBB3-202ENST00000553656 MYO19Q96H55 970 aa14.13□□□□□ -0.15
TUBB3-202ENST00000553656 CEP44Q9C0F1 390 aa14.13□□□□□ -0.15
TUBB3-202ENST00000553656 ETNK2Q9NVF9 386 aa14.13□□□□□ -0.15
TUBB3-202ENST00000553656 UBA2Q9UBT2 640 aaPredicted RBP14.13□□□□□ -0.15
TUBB3-202ENST00000553656 MFHAS1Q9Y4C4 1052 aa14.13□□□□□ -0.15
TUBB3-202ENST00000553656 MUC22E2RYF6 1773 aaPredicted RBP14.13□□□□□ -0.15
TUBB3-202ENST00000553656 ZNF318Q5VUA4 2279 aa14.12□□□□□ -0.15
TUBB3-202ENST00000553656 MYO18AQ92614 2054 aaKnown RBP14.12□□□□□ -0.15
TUBB3-202ENST00000553656 CCDC163A0A0D9SF12 145 aa14.12□□□□□ -0.15
TUBB3-202ENST00000553656 C3orf70A6NLC5 250 aaPredicted RBP14.12□□□□□ -0.15
TUBB3-202ENST00000553656 AXIN1O15169 862 aa14.12□□□□□ -0.15
TUBB3-202ENST00000553656 MFSD11O43934 449 aa14.12□□□□□ -0.15
TUBB3-202ENST00000553656 PRAMEF11O60813 436 aa14.12□□□□□ -0.15
TUBB3-202ENST00000553656 SIN3BO75182 1162 aa14.12□□□□□ -0.15
TUBB3-202ENST00000553656 MT-CO1P00395 513 aa14.12□□□□□ -0.15
TUBB3-202ENST00000553656 MX2P20592 715 aa14.12□□□□□ -0.15
TUBB3-202ENST00000553656 MSNP26038 577 aaKnown RBP14.12□□□□□ -0.15
TUBB3-202ENST00000553656 CDKN2BP42772 138 aa14.12□□□□□ -0.15
TUBB3-202ENST00000553656 PXNP49023 591 aaPredicted RBP14.12□□□□□ -0.15
TUBB3-202ENST00000553656 FNTBP49356 437 aa14.12□□□□□ -0.15
TUBB3-202ENST00000553656 DNA2P51530 1060 aa14.12□□□□□ -0.15
TUBB3-202ENST00000553656 COPS2P61201 443 aa14.12□□□□□ -0.15
TUBB3-202ENST00000553656 DYNLT1P63172 113 aa14.12□□□□□ -0.15
TUBB3-202ENST00000553656 ELAVL3Q14576 367 aaKnown RBP14.12□□□□□ -0.15
TUBB3-202ENST00000553656 CCDC181Q5TID7 509 aa14.12□□□□□ -0.15
TUBB3-202ENST00000553656 KAZNQ674X7 775 aa14.12□□□□□ -0.15
TUBB3-202ENST00000553656 C22orf39Q6P5X5 142 aa14.12□□□□□ -0.15
TUBB3-202ENST00000553656 LEKR1Q6ZMV7 388 aa14.12□□□□□ -0.15
TUBB3-202ENST00000553656 Q6ZVU0 165 aa14.12□□□□□ -0.15
TUBB3-202ENST00000553656 DSG4Q86SJ6 1040 aa14.12□□□□□ -0.15
TUBB3-202ENST00000553656 LONP2Q86WA8 852 aa14.12□□□□□ -0.15
TUBB3-202ENST00000553656 LRRC49Q8IUZ0 686 aa14.12□□□□□ -0.15
TUBB3-202ENST00000553656 PCDH20Q8N6Y1 951 aaKnown RBP14.12□□□□□ -0.15
TUBB3-202ENST00000553656 PQLC3Q8N755 202 aa14.12□□□□□ -0.15
TUBB3-202ENST00000553656 MDGA1Q8NFP4 955 aa14.12□□□□□ -0.15
TUBB3-202ENST00000553656 OR8D1Q8WZ84 308 aa14.12□□□□□ -0.15
TUBB3-202ENST00000553656 PRCCQ92733 491 aaPredicted RBP14.12□□□□□ -0.15
TUBB3-202ENST00000553656 KLC2Q9H0B6 622 aa14.12□□□□□ -0.15
TUBB3-202ENST00000553656 PRSS16Q9NQE7 514 aa14.12□□□□□ -0.15
TUBB3-202ENST00000553656 ZSCAN32Q9NX65 697 aa14.12□□□□□ -0.15
TUBB3-202ENST00000553656 EBF1Q9UH73 591 aa14.12□□□□□ -0.15
TUBB3-202ENST00000553656 IPO11Q9UI26 975 aaKnown RBP14.12□□□□□ -0.15
TUBB3-202ENST00000553656 GOLGA6L9A6NEM1 432 aa14.11□□□□□ -0.15
TUBB3-202ENST00000553656 H0Y858 1186 aa14.11□□□□□ -0.15
TUBB3-202ENST00000553656 K7ERQ8 282 aa14.11□□□□□ -0.15
TUBB3-202ENST00000553656 ACADMP11310 421 aa14.11□□□□□ -0.15
TUBB3-202ENST00000553656 GABRG2P18507 467 aa14.11□□□□□ -0.15
TUBB3-202ENST00000553656 IL10RBQ08334 325 aa14.11□□□□□ -0.15
TUBB3-202ENST00000553656 BYSLQ13895 437 aaKnown RBP14.11□□□□□ -0.15
TUBB3-202ENST00000553656 PPP2R5EQ16537 467 aa14.11□□□□□ -0.15
TUBB3-202ENST00000553656 C9orf64Q5T6V5 341 aa14.11□□□□□ -0.15
TUBB3-202ENST00000553656 ZNF776Q68DI1 518 aaPredicted RBP14.11□□□□□ -0.15
TUBB3-202ENST00000553656 SLC9A4Q6AI14 798 aa14.11□□□□□ -0.15
TUBB3-202ENST00000553656 TIGD7Q6NT04 549 aaPredicted RBP14.11□□□□□ -0.15
TUBB3-202ENST00000553656 RASSF3Q86WH2 238 aa14.11□□□□□ -0.15
TUBB3-202ENST00000553656 CACUL1Q86Y37 369 aa14.11□□□□□ -0.15
TUBB3-202ENST00000553656 TMPRSS6Q8IU80 811 aa14.11□□□□□ -0.15
TUBB3-202ENST00000553656 BBS5Q8N3I7 341 aa14.11□□□□□ -0.15
TUBB3-202ENST00000553656 RYBPQ8N488 228 aaPredicted RBP14.11□□□□□ -0.15
TUBB3-202ENST00000553656 NETO2Q8NC67 525 aa14.11□□□□□ -0.15
TUBB3-202ENST00000553656 PRSS33Q8NF86 280 aa14.11□□□□□ -0.15
TUBB3-202ENST00000553656 FRS2Q8WU20 508 aa14.11□□□□□ -0.15
TUBB3-202ENST00000553656 SIPA1Q96FS4 1042 aa14.11□□□□□ -0.15
TUBB3-202ENST00000553656 SPACA7Q96KW9 195 aa14.11□□□□□ -0.15
TUBB3-202ENST00000553656 MRGPRX1Q96LB2 322 aa14.11□□□□□ -0.15
TUBB3-202ENST00000553656 MTG2Q9H4K7 406 aa14.11□□□□□ -0.15
TUBB3-202ENST00000553656 TRMT1Q9NXH9 659 aaKnown RBP14.11□□□□□ -0.15
TUBB3-202ENST00000553656 PACSIN2Q9UNF0 486 aaPredicted RBP14.11□□□□□ -0.15
TUBB3-202ENST00000553656 FCF1Q9Y324 198 aaKnown RBP14.11□□□□□ -0.15
TUBB3-202ENST00000553656 PCDHGA2Q9Y5H1 932 aa14.11□□□□□ -0.15
TUBB3-202ENST00000553656 HEY1Q9Y5J3 304 aa14.11□□□□□ -0.15
TUBB3-202ENST00000553656 J3KR12 359 aa14.1□□□□□ -0.15
TUBB3-202ENST00000553656 SMAD6O43541 496 aaKnown RBP14.1□□□□□ -0.15
TUBB3-202ENST00000553656 KIF5CO60282 957 aa14.1□□□□□ -0.15
TUBB3-202ENST00000553656 CST8O60676 142 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms