RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 RNF43Q68DV7 783 aa17.93■□□□□ 0.46
PSEN1-206ENST00000553447 TPGS1Q6ZTW0 290 aa17.93■□□□□ 0.46
PSEN1-206ENST00000553447 ZNF534Q76KX8 674 aa17.93■□□□□ 0.46
PSEN1-206ENST00000553447 PDCD7Q8N8D1 485 aaKnown RBP17.93■□□□□ 0.46
PSEN1-206ENST00000553447 ZNF599Q96NL3 588 aa17.93■□□□□ 0.46
PSEN1-206ENST00000553447 SERPINB12Q96P63 405 aa17.93■□□□□ 0.46
PSEN1-206ENST00000553447 ZIM3Q96PE6 472 aa17.93■□□□□ 0.46
PSEN1-206ENST00000553447 FCRL5Q96RD9 977 aa17.93■□□□□ 0.46
PSEN1-206ENST00000553447 MUC3BQ9H195 1237 aa17.93■□□□□ 0.46
PSEN1-206ENST00000553447 ATP13A1Q9HD20 1204 aa17.93■□□□□ 0.46
PSEN1-206ENST00000553447 NINJ2Q9NZG7 142 aa17.93■□□□□ 0.46
PSEN1-206ENST00000553447 MIA3Q5JRA6 1907 aa17.93■□□□□ 0.46
PSEN1-206ENST00000553447 TMEM265A0A087WTH1 108 aa17.92■□□□□ 0.46
PSEN1-206ENST00000553447 GOLGA6BA6NDN3 693 aa17.92■□□□□ 0.46
PSEN1-206ENST00000553447 ERI2A8K979 691 aaKnown RBP17.92■□□□□ 0.46
PSEN1-206ENST00000553447 ALOX15BO15296 676 aa17.92■□□□□ 0.46
PSEN1-206ENST00000553447 RIPK2O43353 540 aa17.92■□□□□ 0.46
PSEN1-206ENST00000553447 NEBLO76041 1014 aa17.92■□□□□ 0.46
PSEN1-206ENST00000553447 MMP13P45452 471 aa17.92■□□□□ 0.46
PSEN1-206ENST00000553447 SARNPP82979 210 aaKnown RBP17.92■□□□□ 0.46
PSEN1-206ENST00000553447 LBRQ14739 615 aaKnown RBP17.92■□□□□ 0.46
PSEN1-206ENST00000553447 MSS51Q4VC12 460 aa17.92■□□□□ 0.46
PSEN1-206ENST00000553447 FSCBQ5H9T9 825 aa17.92■□□□□ 0.46
PSEN1-206ENST00000553447 TMCO4Q5TGY1 634 aa17.92■□□□□ 0.46
PSEN1-206ENST00000553447 FYB2Q5VWT5 728 aa17.92■□□□□ 0.46
PSEN1-206ENST00000553447 DENND2CQ68D51 928 aa17.92■□□□□ 0.46
PSEN1-206ENST00000553447 GET4Q7L5D6 327 aaPredicted RBP17.92■□□□□ 0.46
PSEN1-206ENST00000553447 OTOP3Q7RTS5 596 aa17.92■□□□□ 0.46
PSEN1-206ENST00000553447 CAND1Q86VP6 1230 aaKnown RBP17.92■□□□□ 0.46
PSEN1-206ENST00000553447 MFN1Q8IWA4 741 aa17.92■□□□□ 0.46
PSEN1-206ENST00000553447 KLHDC8BQ8IXV7 354 aa17.92■□□□□ 0.46
PSEN1-206ENST00000553447 KIAA1958Q8N8K9 716 aa17.92■□□□□ 0.46
PSEN1-206ENST00000553447 WFDC5Q8TCV5 224 aa17.92■□□□□ 0.46
PSEN1-206ENST00000553447 FGF13Q92913 245 aa17.92■□□□□ 0.46
PSEN1-206ENST00000553447 OTUB2Q96DC9 234 aa17.92■□□□□ 0.46
PSEN1-206ENST00000553447 PPP1R2P1Q96PQ5 205 aa17.92■□□□□ 0.46
PSEN1-206ENST00000553447 MLPHQ9BV36 600 aaPredicted RBP17.92■□□□□ 0.46
PSEN1-206ENST00000553447 CDH22Q9UJ99 828 aa17.92■□□□□ 0.46
PSEN1-206ENST00000553447 PLAAQ9Y263 795 aa17.92■□□□□ 0.46
PSEN1-206ENST00000553447 GOLGA6CA6NDK9 693 aa17.91■□□□□ 0.46
PSEN1-206ENST00000553447 SLC9A3R1O14745 358 aaPredicted RBP17.91■□□□□ 0.46
PSEN1-206ENST00000553447 PSMD3O43242 534 aa17.91■□□□□ 0.46
PSEN1-206ENST00000553447 BANF1O75531 89 aa17.91■□□□□ 0.46
PSEN1-206ENST00000553447 SUN1O94901 812 aa17.91■□□□□ 0.46
PSEN1-206ENST00000553447 AP2A1O95782 977 aa17.91■□□□□ 0.46
PSEN1-206ENST00000553447 TTC4O95801 387 aa17.91■□□□□ 0.46
PSEN1-206ENST00000553447 GOLGA6DP0CG33 693 aa17.91■□□□□ 0.46
PSEN1-206ENST00000553447 GLDCP23378 1020 aa17.91■□□□□ 0.46
PSEN1-206ENST00000553447 CSKP41240 450 aa17.91■□□□□ 0.46
PSEN1-206ENST00000553447 FASTKD3Q14CZ7 662 aaKnown RBP17.91■□□□□ 0.46
PSEN1-206ENST00000553447 KYNUQ16719 465 aa17.91■□□□□ 0.46
PSEN1-206ENST00000553447 BBS9Q3SYG4 887 aa17.91■□□□□ 0.46
PSEN1-206ENST00000553447 FAM78AQ5JUQ0 283 aa17.91■□□□□ 0.46
PSEN1-206ENST00000553447 UBAP2Q5T6F2 1119 aaKnown RBP17.91■□□□□ 0.46
PSEN1-206ENST00000553447 KCTD11Q693B1 232 aa17.91■□□□□ 0.46
PSEN1-206ENST00000553447 LRIG3Q6UXM1 1119 aa17.91■□□□□ 0.46
PSEN1-206ENST00000553447 LEKR1Q6ZMV7 388 aa17.91■□□□□ 0.46
PSEN1-206ENST00000553447 CCDC117Q8IWD4 279 aaPredicted RBP17.91■□□□□ 0.46
PSEN1-206ENST00000553447 ZBED8Q8IZ13 594 aa17.91■□□□□ 0.46
PSEN1-206ENST00000553447 BHMTQ93088 406 aa17.91■□□□□ 0.46
PSEN1-206ENST00000553447 C9orf72Q96LT7 481 aa17.91■□□□□ 0.46
PSEN1-206ENST00000553447 TTC25Q96NG3 672 aa17.91■□□□□ 0.46
PSEN1-206ENST00000553447 ASB16Q96NS5 453 aa17.91■□□□□ 0.46
PSEN1-206ENST00000553447 FEM1AQ9BSK4 669 aa17.91■□□□□ 0.46
PSEN1-206ENST00000553447 TTYH1Q9H313 450 aaPredicted RBP17.91■□□□□ 0.46
PSEN1-206ENST00000553447 XAB2Q9HCS7 855 aaKnown RBP17.91■□□□□ 0.46
PSEN1-206ENST00000553447 NT5MQ9NPB1 228 aa17.91■□□□□ 0.46
PSEN1-206ENST00000553447 GOLGA6AQ9NYA3 693 aa17.91■□□□□ 0.46
PSEN1-206ENST00000553447 PLK2Q9NYY3 685 aa17.91■□□□□ 0.46
PSEN1-206ENST00000553447 GDE1Q9NZC3 331 aa17.91■□□□□ 0.46
PSEN1-206ENST00000553447 CLEC1BQ9P126 229 aa17.91■□□□□ 0.46
PSEN1-206ENST00000553447 TTLL3Q9Y4R7 772 aa17.91■□□□□ 0.46
PSEN1-206ENST00000553447 OR51B4Q9Y5P0 310 aa17.91■□□□□ 0.46
PSEN1-206ENST00000553447 AGPSO00116 658 aa17.9■□□□□ 0.46
PSEN1-206ENST00000553447 ANXA9O76027 345 aa17.9■□□□□ 0.46
PSEN1-206ENST00000553447 PENKP01210 267 aaPredicted RBP17.9■□□□□ 0.46
PSEN1-206ENST00000553447 NUDT17P0C025 328 aa17.9■□□□□ 0.46
PSEN1-206ENST00000553447 MLNP12872 115 aa17.9■□□□□ 0.46
PSEN1-206ENST00000553447 MZF1P28698 734 aaPredicted RBP17.9■□□□□ 0.46
PSEN1-206ENST00000553447 GRIA1P42261 906 aa17.9■□□□□ 0.46
PSEN1-206ENST00000553447 MAGEA3P43357 314 aa17.9■□□□□ 0.46
PSEN1-206ENST00000553447 NUMBP49757 651 aa17.9■□□□□ 0.46
PSEN1-206ENST00000553447 FAM193AP78312 1265 aa17.9■□□□□ 0.46
PSEN1-206ENST00000553447 SLC29A2Q14542 456 aa17.9■□□□□ 0.46
PSEN1-206ENST00000553447 HP1BP3Q5SSJ5 553 aaPredicted RBP17.9■□□□□ 0.46
PSEN1-206ENST00000553447 LRRC8BQ6P9F7 803 aa17.9■□□□□ 0.46
PSEN1-206ENST00000553447 TMEM25Q86YD3 366 aa17.9■□□□□ 0.46
PSEN1-206ENST00000553447 ANKMY2Q8IV38 441 aa17.9■□□□□ 0.46
PSEN1-206ENST00000553447 FIBINQ8TAL6 211 aa17.9■□□□□ 0.46
PSEN1-206ENST00000553447 SMARCD2Q92925 531 aa17.9■□□□□ 0.46
PSEN1-206ENST00000553447 IRF7Q92985 503 aa17.9■□□□□ 0.46
PSEN1-206ENST00000553447 RSPRY1Q96DX4 576 aa17.9■□□□□ 0.46
PSEN1-206ENST00000553447 ALG14Q96F25 216 aa17.9■□□□□ 0.46
PSEN1-206ENST00000553447 OXNAD1Q96HP4 312 aaPredicted RBP17.9■□□□□ 0.46
PSEN1-206ENST00000553447 LRRC3BQ96PB8 259 aa17.9■□□□□ 0.46
PSEN1-206ENST00000553447 RUFY1Q96T51 708 aa17.9■□□□□ 0.46
PSEN1-206ENST00000553447 WDR83Q9BRX9 315 aaKnown RBP17.9■□□□□ 0.46
PSEN1-206ENST00000553447 SLC25A51Q9H1U9 297 aa17.9■□□□□ 0.46
PSEN1-206ENST00000553447 LINC00597Q9H2U6 94 aa17.9■□□□□ 0.46
PSEN1-206ENST00000553447 SPHK2Q9NRA0 654 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms