RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 SDHBP21912 280 aa10.48□□□□□ -0.73
TRAFD1-208ENST00000552890 CA4P22748 312 aa10.48□□□□□ -0.73
TRAFD1-208ENST00000552890 MZF1P28698 734 aaPredicted RBP10.48□□□□□ -0.73
TRAFD1-208ENST00000552890 P2RY2P41231 377 aa10.48□□□□□ -0.73
TRAFD1-208ENST00000552890 FNTBP49356 437 aa10.48□□□□□ -0.73
TRAFD1-208ENST00000552890 NHLH1Q02575 133 aa10.48□□□□□ -0.73
TRAFD1-208ENST00000552890 IL10RBQ08334 325 aa10.48□□□□□ -0.73
TRAFD1-208ENST00000552890 NSUN2Q08J23 767 aaKnown RBP eCLIP10.48□□□□□ -0.73
TRAFD1-208ENST00000552890 DPYSQ14117 519 aa10.48□□□□□ -0.73
TRAFD1-208ENST00000552890 GSE1Q14687 1217 aa10.48□□□□□ -0.73
TRAFD1-208ENST00000552890 PTPRNQ16849 979 aa10.48□□□□□ -0.73
TRAFD1-208ENST00000552890 WDR45BQ5MNZ6 344 aa10.48□□□□□ -0.73
TRAFD1-208ENST00000552890 KIAA1324Q6UXG2 1013 aaKnown RBP10.48□□□□□ -0.73
TRAFD1-208ENST00000552890 CIR1Q86X95 450 aaPredicted RBP10.48□□□□□ -0.73
TRAFD1-208ENST00000552890 APCDD1Q8J025 514 aa10.48□□□□□ -0.73
TRAFD1-208ENST00000552890 ATPAF2Q8N5M1 289 aa10.48□□□□□ -0.73
TRAFD1-208ENST00000552890 ARFGAP1Q8N6T3 406 aa10.48□□□□□ -0.73
TRAFD1-208ENST00000552890 CEP76Q8TAP6 659 aa10.48□□□□□ -0.73
TRAFD1-208ENST00000552890 WFDC5Q8TCV5 224 aa10.48□□□□□ -0.73
TRAFD1-208ENST00000552890 HCAR2Q8TDS4 363 aa10.48□□□□□ -0.73
TRAFD1-208ENST00000552890 CYB5D2Q8WUJ1 264 aa10.48□□□□□ -0.73
TRAFD1-208ENST00000552890 SKA1Q96BD8 255 aa10.48□□□□□ -0.73
TRAFD1-208ENST00000552890 HAUS1Q96CS2 278 aa10.48□□□□□ -0.73
TRAFD1-208ENST00000552890 GDAP1L1Q96MZ0 367 aa10.48□□□□□ -0.73
TRAFD1-208ENST00000552890 CSPG4P5Q96PW8 444 aa10.48□□□□□ -0.73
TRAFD1-208ENST00000552890 KCTD15Q96SI1 283 aaPredicted RBP10.48□□□□□ -0.73
TRAFD1-208ENST00000552890 OMDQ99983 421 aa10.48□□□□□ -0.73
TRAFD1-208ENST00000552890 TRIM7Q9C029 511 aa10.48□□□□□ -0.73
TRAFD1-208ENST00000552890 SP110Q9HB58 689 aa10.48□□□□□ -0.73
TRAFD1-208ENST00000552890 PCDH18Q9HCL0 1135 aa10.48□□□□□ -0.73
TRAFD1-208ENST00000552890 OSGEPQ9NPF4 335 aa10.48□□□□□ -0.73
TRAFD1-208ENST00000552890 PRSS16Q9NQE7 514 aa10.48□□□□□ -0.73
TRAFD1-208ENST00000552890 ANLNQ9NQW6 1124 aa10.48□□□□□ -0.73
TRAFD1-208ENST00000552890 CWC15Q9P013 229 aaKnown RBP10.48□□□□□ -0.73
TRAFD1-208ENST00000552890 UBA2Q9UBT2 640 aaPredicted RBP10.48□□□□□ -0.73
TRAFD1-208ENST00000552890 ZNF212Q9UDV6 495 aa10.48□□□□□ -0.73
TRAFD1-208ENST00000552890 AMFRQ9UKV5 643 aa10.48□□□□□ -0.73
TRAFD1-208ENST00000552890 FAM170AA1A519 330 aa10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 LRRD1A4D1F6 860 aa10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 TMEM110-MUSTN1A8MSY1 372 aa10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 PRR5-ARHGAP8B1AHC4 643 aa10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 FAM72CH0Y354 149 aa10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 PPP1R12AO14974 1030 aaPredicted RBP10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 RETP07949 1114 aa10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 GNSP15586 552 aa10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 GABRG2P18507 467 aa10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 KDELR1P24390 212 aa10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 CD6P30203 668 aa10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 GGCXP38435 758 aa10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 CSNK1DP48730 415 aa10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 POLR2LP62875 67 aaKnown RBP10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 MESP2Q0VG99 397 aa10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 PDK1Q15118 436 aa10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 CST6Q15828 149 aa10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 SMTNL2Q2TAL5 461 aa10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 CARD16Q5EG05 197 aa10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 TFDP3Q5H9I0 405 aa10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 KCNT1Q5JUK3 1230 aa10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 C9orf64Q5T6V5 341 aa10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 FAM72AQ5TYM5 149 aa10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 HEATR6Q6AI08 1181 aaKnown RBP10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 FAM72DQ6L9T8 149 aa10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 NEK5Q6P3R8 708 aa10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 TMEM92Q6UXU6 159 aa10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 PEX26Q7Z412 305 aa10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 FAM72BQ86X60 149 aa10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 DNAAF5Q86Y56 855 aa10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 KATNAL2Q8IYT4 538 aa10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 NDUFAF2Q8N183 169 aa10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 PYROXD2Q8N2H3 581 aa10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 MDGA1Q8NFP4 955 aa10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 EXD1Q8NHP7 514 aa10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 TPCN2Q8NHX9 752 aa10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 GANCQ8TET4 914 aa10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 RUBCNQ92622 972 aa10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 RAB7BQ96AH8 199 aa10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 RPL10LQ96L21 214 aaKnown RBP10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 MRGPRX3Q96LB0 322 aa10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 TUBGCP5Q96RT8 1024 aa10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 HEPHQ9BQS7 1158 aa10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 CPEB1Q9BZB8 566 aaKnown RBP10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 BTBD1Q9H0C5 482 aa10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 DUSP15Q9H1R2 295 aaPredicted RBP10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 USP36Q9P275 1121 aaKnown RBP10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 SEPT3Q9UH03 358 aa10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 COL4A3Q01955 1670 aa10.47□□□□□ -0.73
TRAFD1-208ENST00000552890 ATG2BQ96BY7 2078 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 A0A0D9SEW6 157 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 APOL1O14791 398 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 BUB1BO60566 1050 aaPredicted RBP10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 PRAMEF11O60813 436 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 SIN3BO75182 1162 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 PALMO75781 387 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 ZMPSTE24O75844 475 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 IL1BP01584 269 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 CHRM1P11229 460 aaPredicted RBP10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 SRCP12931 536 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 NDUFV2P19404 249 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 COMTP21964 271 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms