RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 C1orf61Q13536 156 aa12.8□□□□□ -0.36
SNRPF-204ENST00000552085 SNRNP35Q16560 246 aaKnown RBP12.8□□□□□ -0.36
SNRPF-204ENST00000552085 FSCBQ5H9T9 825 aa12.8□□□□□ -0.36
SNRPF-204ENST00000552085 PIP5KL1Q5T9C9 394 aa12.8□□□□□ -0.36
SNRPF-204ENST00000552085 TMPRSS9Q7Z410 1059 aa12.8□□□□□ -0.36
SNRPF-204ENST00000552085 RBFAQ8N0V3 343 aa12.8□□□□□ -0.36
SNRPF-204ENST00000552085 CARNMT1Q8N4J0 409 aa12.8□□□□□ -0.36
SNRPF-204ENST00000552085 HJURPQ8NCD3 748 aaPredicted RBP12.8□□□□□ -0.36
SNRPF-204ENST00000552085 ELMO3Q96BJ8 720 aa12.8□□□□□ -0.36
SNRPF-204ENST00000552085 DNAJC19Q96DA6 116 aa12.8□□□□□ -0.36
SNRPF-204ENST00000552085 SLC4A5Q9BY07 1137 aa12.8□□□□□ -0.36
SNRPF-204ENST00000552085 FGFBP2Q9BYJ0 223 aa12.8□□□□□ -0.36
SNRPF-204ENST00000552085 GULP1Q9UBP9 304 aa12.8□□□□□ -0.36
SNRPF-204ENST00000552085 STK17AQ9UEE5 414 aa12.8□□□□□ -0.36
SNRPF-204ENST00000552085 SFMBT1Q9UHJ3 866 aa12.8□□□□□ -0.36
SNRPF-204ENST00000552085 PPM1HQ9ULR3 514 aa12.8□□□□□ -0.36
SNRPF-204ENST00000552085 ZFR2Q9UPR6 939 aaKnown RBP12.8□□□□□ -0.36
SNRPF-204ENST00000552085 CELSR1Q9NYQ6 3014 aa12.79□□□□□ -0.36
SNRPF-204ENST00000552085 K7EM74 188 aa12.79□□□□□ -0.36
SNRPF-204ENST00000552085 LDLRP01130 860 aa12.79□□□□□ -0.36
SNRPF-204ENST00000552085 PRKAR1AP10644 381 aa12.79□□□□□ -0.36
SNRPF-204ENST00000552085 RABIFP47224 123 aa12.79□□□□□ -0.36
SNRPF-204ENST00000552085 CYP24A1Q07973 514 aa12.79□□□□□ -0.36
SNRPF-204ENST00000552085 CDC20Q12834 499 aa12.79□□□□□ -0.36
SNRPF-204ENST00000552085 EIF2B5Q13144 721 aaKnown RBP12.79□□□□□ -0.36
SNRPF-204ENST00000552085 CDH18Q13634 790 aa12.79□□□□□ -0.36
SNRPF-204ENST00000552085 PDE1CQ14123 709 aaPredicted RBP12.79□□□□□ -0.36
SNRPF-204ENST00000552085 DEFB109BQ30KR1 87 aa12.79□□□□□ -0.36
SNRPF-204ENST00000552085 FAM133BQ5BKY9 247 aaKnown RBP12.79□□□□□ -0.36
SNRPF-204ENST00000552085 PRRT3Q5FWE3 981 aa12.79□□□□□ -0.36
SNRPF-204ENST00000552085 TCTN3Q6NUS6 607 aa12.79□□□□□ -0.36
SNRPF-204ENST00000552085 TIPARPQ7Z3E1 657 aaKnown RBP12.79□□□□□ -0.36
SNRPF-204ENST00000552085 CCDC117Q8IWD4 279 aaPredicted RBP12.79□□□□□ -0.36
SNRPF-204ENST00000552085 ARL10Q8N8L6 244 aa12.79□□□□□ -0.36
SNRPF-204ENST00000552085 FRS2Q8WU20 508 aa12.79□□□□□ -0.36
SNRPF-204ENST00000552085 SLC45A3Q96JT2 553 aa12.79□□□□□ -0.36
SNRPF-204ENST00000552085 PRICKLE1Q96MT3 831 aaPredicted RBP12.79□□□□□ -0.36
SNRPF-204ENST00000552085 DUSP16Q9BY84 665 aa12.79□□□□□ -0.36
SNRPF-204ENST00000552085 APOBEC3BQ9UH17 382 aaKnown RBP12.79□□□□□ -0.36
SNRPF-204ENST00000552085 HIVEP1P15822 2718 aa12.78□□□□□ -0.36
SNRPF-204ENST00000552085 FRMD3A2A2Y4 597 aa12.78□□□□□ -0.36
SNRPF-204ENST00000552085 TYW5A2RUC4 315 aaKnown RBP12.78□□□□□ -0.36
SNRPF-204ENST00000552085 YY2O15391 372 aa12.78□□□□□ -0.36
SNRPF-204ENST00000552085 DUX1O43812 170 aa12.78□□□□□ -0.36
SNRPF-204ENST00000552085 P4HA1P13674 534 aa12.78□□□□□ -0.36
SNRPF-204ENST00000552085 SLC11A2P49281 568 aa12.78□□□□□ -0.36
SNRPF-204ENST00000552085 EIF2S3LQ2VIR3 472 aaKnown RBP12.78□□□□□ -0.36
SNRPF-204ENST00000552085 SEL1L3Q68CR1 1132 aa12.78□□□□□ -0.36
SNRPF-204ENST00000552085 ASB18Q6ZVZ8 466 aa12.78□□□□□ -0.36
SNRPF-204ENST00000552085 CACNA2D3Q8IZS8 1091 aa12.78□□□□□ -0.36
SNRPF-204ENST00000552085 APCDD1Q8J025 514 aa12.78□□□□□ -0.36
SNRPF-204ENST00000552085 RNF139Q8WU17 664 aa12.78□□□□□ -0.36
SNRPF-204ENST00000552085 MARVELD3Q96A59 401 aa12.78□□□□□ -0.36
SNRPF-204ENST00000552085 TBATAQ96M53 351 aa12.78□□□□□ -0.36
SNRPF-204ENST00000552085 TWNKQ96RR1 684 aa12.78□□□□□ -0.36
SNRPF-204ENST00000552085 TCEAL2Q9H3H9 227 aaPredicted RBP12.78□□□□□ -0.36
SNRPF-204ENST00000552085 DAAM1Q9Y4D1 1078 aa12.78□□□□□ -0.36
SNRPF-204ENST00000552085 FARP1Q9Y4F1 1045 aaPredicted RBP12.78□□□□□ -0.36
SNRPF-204ENST00000552085 SVILO95425 2214 aa12.78□□□□□ -0.36
SNRPF-204ENST00000552085 PDZD2O15018 2839 aa12.78□□□□□ -0.36
SNRPF-204ENST00000552085 APCP25054 2843 aa12.77□□□□□ -0.36
SNRPF-204ENST00000552085 MKRN2OSH3BPM6 223 aa12.77□□□□□ -0.37
SNRPF-204ENST00000552085 H3BQV1 296 aa12.77□□□□□ -0.37
SNRPF-204ENST00000552085 ALOX15BO15296 676 aa12.77□□□□□ -0.37
SNRPF-204ENST00000552085 SPINT1O43278 529 aa12.77□□□□□ -0.37
SNRPF-204ENST00000552085 MSI1O43347 362 aaKnown RBP12.77□□□□□ -0.37
SNRPF-204ENST00000552085 HNRNPRO43390 633 aaKnown RBP12.77□□□□□ -0.37
SNRPF-204ENST00000552085 PCDH8O95206 1070 aa12.77□□□□□ -0.37
SNRPF-204ENST00000552085 ZNF18P17022 549 aa12.77□□□□□ -0.37
SNRPF-204ENST00000552085 OAS2P29728 719 aaKnown RBP12.77□□□□□ -0.37
SNRPF-204ENST00000552085 UGT1A3P35503 534 aa12.77□□□□□ -0.37
SNRPF-204ENST00000552085 RECQLP46063 649 aaPredicted RBP12.77□□□□□ -0.37
SNRPF-204ENST00000552085 ARSDP51689 593 aa12.77□□□□□ -0.37
SNRPF-204ENST00000552085 RPS24P62847 133 aaKnown RBP12.77□□□□□ -0.37
SNRPF-204ENST00000552085 BIRC3Q13489 604 aa12.77□□□□□ -0.37
SNRPF-204ENST00000552085 NCOA4Q13772 614 aa12.77□□□□□ -0.37
SNRPF-204ENST00000552085 TMEM259Q4ZIN3 620 aa12.77□□□□□ -0.37
SNRPF-204ENST00000552085 TPRG1LQ5T0D9 272 aa12.77□□□□□ -0.37
SNRPF-204ENST00000552085 SV2BQ7L1I2 683 aa12.77□□□□□ -0.37
SNRPF-204ENST00000552085 CCNJLQ8IV13 435 aa12.77□□□□□ -0.37
SNRPF-204ENST00000552085 KYQ8NBH2 561 aa12.77□□□□□ -0.37
SNRPF-204ENST00000552085 PDCD6IPQ8WUM4 868 aaKnown RBP12.77□□□□□ -0.37
SNRPF-204ENST00000552085 TCTN2Q96GX1 697 aa12.77□□□□□ -0.37
SNRPF-204ENST00000552085 LRRC61Q9BV99 259 aa12.77□□□□□ -0.37
SNRPF-204ENST00000552085 SIRPGQ9P1W8 387 aa12.77□□□□□ -0.37
SNRPF-204ENST00000552085 CCDC39Q9UFE4 941 aa12.77□□□□□ -0.37
SNRPF-204ENST00000552085 GGT7Q9UJ14 662 aa12.77□□□□□ -0.37
SNRPF-204ENST00000552085 ERRFI1Q9UJM3 462 aaPredicted RBP12.77□□□□□ -0.37
SNRPF-204ENST00000552085 NAALADL1Q9UQQ1 740 aa12.77□□□□□ -0.37
SNRPF-204ENST00000552085 TNRC6AQ8NDV7 1962 aaKnown RBP12.77□□□□□ -0.37
SNRPF-204ENST00000552085 MCF2LO15068 1137 aa12.76□□□□□ -0.37
SNRPF-204ENST00000552085 RAD51BO15315 384 aa12.76□□□□□ -0.37
SNRPF-204ENST00000552085 ACSL4O60488 711 aa12.76□□□□□ -0.37
SNRPF-204ENST00000552085 LUC7L3O95232 432 aaKnown RBP12.76□□□□□ -0.37
SNRPF-204ENST00000552085 CCL4P13236 92 aa12.76□□□□□ -0.37
SNRPF-204ENST00000552085 IDEP14735 1019 aa12.76□□□□□ -0.37
SNRPF-204ENST00000552085 CCDC15Q0P6D6 951 aa12.76□□□□□ -0.37
SNRPF-204ENST00000552085 RAB41Q5JT25 222 aa12.76□□□□□ -0.37
SNRPF-204ENST00000552085 PHF19Q5T6S3 580 aa12.76□□□□□ -0.37
SNRPF-204ENST00000552085 BHLHA9Q7RTU4 235 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms