RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 CLCA1A8K7I4 914 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 TMEM233B4DJY2 109 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 E9PLN8 166 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 F8W810 466 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 GCOM1H8Y6P7 765 aaPredicted RBP2.61□□□□□ -1.99
CPSF6-207ENST00000551516 NARSO43776 548 aaKnown RBP2.61□□□□□ -1.99
CPSF6-207ENST00000551516 TRIM13O60858 407 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 VPS4BO75351 444 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 ERN1O75460 977 aaKnown RBP2.61□□□□□ -1.99
CPSF6-207ENST00000551516 SOAT2O75908 522 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 RECQL4O94761 1208 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 DDHD2O94830 711 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 PRSS23O95084 383 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 C1RP00736 705 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 GALTP07902 379 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 WEE2P0C1S8 567 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 ATXN1LP0C7T5 689 aaKnown RBP2.61□□□□□ -1.99
CPSF6-207ENST00000551516 SPATA31D3P0C874 917 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 POLR2MP0CAP2 368 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 ZSCAN22P10073 491 aaPredicted RBP2.61□□□□□ -1.99
CPSF6-207ENST00000551516 CTSAP10619 480 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 EPCAMP16422 314 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 HOXB8P17481 243 aaPredicted RBP2.61□□□□□ -1.99
CPSF6-207ENST00000551516 TPH1P17752 444 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 BTF3P20290 206 aaKnown RBP2.61□□□□□ -1.99
CPSF6-207ENST00000551516 COMTP21964 271 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 FDXRP22570 491 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 GCSHP23434 173 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 CHMLP26374 656 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 LRPAP1P30533 357 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 CHKAP35790 457 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 VIPR2P41587 438 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 GRK6P43250 576 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 CCT5P48643 541 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 ALDH9A1P49189 494 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 CLCN4P51793 760 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 PTTG1IPP53801 180 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 STARD6P59095 220 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 ACTR2P61160 394 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 NHLH2Q02577 135 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 KRT17Q04695 432 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 ARHGEF7Q14155 803 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 BTG3Q14201 252 aaPredicted RBP2.61□□□□□ -1.99
CPSF6-207ENST00000551516 NEDD9Q14511 834 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 CSRP2Q16527 193 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 UGCGQ16739 394 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 INSCQ1MX18 579 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 TMEM266Q2M3C6 531 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 MGAT5BQ3V5L5 792 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 HS1BP3Q53T59 392 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 ZFYVE27Q5T4F4 411 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 DCAF12L1Q5VU92 463 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 RRAGBQ5VZM2 374 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 SPOCD1Q6ZMY3 1216 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 SPATA31D4Q6ZUB0 917 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 SLC24A5Q71RS6 500 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 NIPA1Q7RTP0 329 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 GPR149Q86SP6 731 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 ECHDC2Q86YB7 292 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 ZNF280BQ86YH2 543 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 KRTAP1-3Q8IUG1 177 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 UBALD2Q8IYN6 164 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 CFAP52Q8N1V2 620 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 NME8Q8N427 588 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 FBXL16Q8N461 479 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 SLC44A3Q8N4M1 653 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 C12orf76Q8N812 135 aaPredicted RBP2.61□□□□□ -1.99
CPSF6-207ENST00000551516 CMASQ8NFW8 434 aaPredicted RBP2.61□□□□□ -1.99
CPSF6-207ENST00000551516 OR56A3Q8NH54 315 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 MUL1Q969V5 352 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 CLDN23Q96B33 292 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 CHFRQ96EP1 664 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 MARS2Q96GW9 593 aaKnown RBP2.61□□□□□ -1.99
CPSF6-207ENST00000551516 MED15Q96RN5 788 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 TRIB1Q96RU8 372 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 MNTQ99583 582 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 PRRX2Q99811 253 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 ADAM2Q99965 735 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 VKORC1Q9BQB6 163 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 HEPHQ9BQS7 1158 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 MXRA8Q9BRK3 442 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 TTLL2Q9BWV7 592 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 TLR10Q9BXR5 811 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 GPR87Q9BY21 358 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 STK33Q9BYT3 514 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 MAGEB5Q9BZ81 275 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 CPEB1Q9BZB8 566 aaKnown RBP2.61□□□□□ -1.99
CPSF6-207ENST00000551516 TTYH3Q9C0H2 523 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 LSG1Q9H089 658 aaKnown RBP2.61□□□□□ -1.99
CPSF6-207ENST00000551516 CXCL16Q9H2A7 254 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 ZCCHC4Q9H5U6 513 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 NRDE2Q9H7Z3 1164 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 MINDY3Q9H8M7 445 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 AGO4Q9HCK5 861 aaKnown RBP2.61□□□□□ -1.99
CPSF6-207ENST00000551516 PARD6AQ9NPB6 346 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 HEYLQ9NQ87 328 aaPredicted RBP2.61□□□□□ -1.99
CPSF6-207ENST00000551516 GJB4Q9NTQ9 266 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 TMEM161AQ9NX61 479 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 MIOSQ9NXC5 875 aa2.61□□□□□ -1.99
CPSF6-207ENST00000551516 WRAP73Q9P2S5 460 aaPredicted RBP2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms