RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 SDC4P31431 198 aa13.34□□□□□ -0.27
NPAS3-209ENST00000551008 ACVRL1P37023 503 aa13.34□□□□□ -0.27
NPAS3-209ENST00000551008 CTSKP43235 329 aa13.34□□□□□ -0.27
NPAS3-209ENST00000551008 NSFP46459 744 aaKnown RBP13.34□□□□□ -0.27
NPAS3-209ENST00000551008 GRIA4P48058 902 aa13.34□□□□□ -0.27
NPAS3-209ENST00000551008 CNTN1Q12860 1018 aa13.34□□□□□ -0.27
NPAS3-209ENST00000551008 HLA-BQ31612 363 aa13.34□□□□□ -0.27
NPAS3-209ENST00000551008 POM121L1PQ3SYA9 428 aa13.34□□□□□ -0.27
NPAS3-209ENST00000551008 DBX2Q6ZNG2 339 aa13.34□□□□□ -0.27
NPAS3-209ENST00000551008 BAHD1Q8TBE0 780 aaPredicted RBP13.34□□□□□ -0.27
NPAS3-209ENST00000551008 PIP4K2CQ8TBX8 421 aa13.34□□□□□ -0.27
NPAS3-209ENST00000551008 FAM172AQ8WUF8 416 aa13.34□□□□□ -0.27
NPAS3-209ENST00000551008 OR8D1Q8WZ84 308 aa13.34□□□□□ -0.27
NPAS3-209ENST00000551008 OMDQ99983 421 aa13.34□□□□□ -0.27
NPAS3-209ENST00000551008 ACE2Q9BYF1 805 aaPredicted RBP13.34□□□□□ -0.27
NPAS3-209ENST00000551008 ZYG11BQ9C0D3 744 aa13.34□□□□□ -0.27
NPAS3-209ENST00000551008 OSBPL2Q9H1P3 480 aa13.34□□□□□ -0.27
NPAS3-209ENST00000551008 NOL6Q9H6R4 1146 aaKnown RBP13.34□□□□□ -0.27
NPAS3-209ENST00000551008 GAREM1Q9H706 876 aa13.34□□□□□ -0.27
NPAS3-209ENST00000551008 ARHGAP20Q9P2F6 1191 aa13.34□□□□□ -0.27
NPAS3-209ENST00000551008 PPARGC1AQ9UBK2 798 aaKnown RBP13.34□□□□□ -0.27
NPAS3-209ENST00000551008 NCKAP1Q9Y2A7 1128 aa13.34□□□□□ -0.27
NPAS3-209ENST00000551008 BTBD3Q9Y2F9 522 aa13.34□□□□□ -0.27
NPAS3-209ENST00000551008 ANKRD6Q9Y2G4 727 aa13.34□□□□□ -0.27
NPAS3-209ENST00000551008 PAXBP1Q9Y5B6 917 aa13.34□□□□□ -0.27
NPAS3-209ENST00000551008 TDRD6O60522 2096 aaKnown RBP13.34□□□□□ -0.27
NPAS3-209ENST00000551008 ANKRD36A6QL64 1941 aa13.34□□□□□ -0.27
NPAS3-209ENST00000551008 COL5A1P20908 1838 aaPredicted RBP13.34□□□□□ -0.27
NPAS3-209ENST00000551008 ILVBLA1L0T0 632 aa13.33□□□□□ -0.28
NPAS3-209ENST00000551008 LRRC53A6NM62 1247 aa13.33□□□□□ -0.28
NPAS3-209ENST00000551008 ALOX15BO15296 676 aa13.33□□□□□ -0.28
NPAS3-209ENST00000551008 PLRG1O43660 514 aaKnown RBP13.33□□□□□ -0.28
NPAS3-209ENST00000551008 LRIG2O94898 1065 aa13.33□□□□□ -0.28
NPAS3-209ENST00000551008 ZNF883P0CG24 379 aa13.33□□□□□ -0.28
NPAS3-209ENST00000551008 KRT3P12035 628 aa13.33□□□□□ -0.28
NPAS3-209ENST00000551008 FERP16591 822 aa13.33□□□□□ -0.28
NPAS3-209ENST00000551008 GPD1P21695 349 aa13.33□□□□□ -0.28
NPAS3-209ENST00000551008 OR1E1P30953 314 aa13.33□□□□□ -0.28
NPAS3-209ENST00000551008 NNMTP40261 264 aa13.33□□□□□ -0.28
NPAS3-209ENST00000551008 ZNF165P49910 485 aa13.33□□□□□ -0.28
NPAS3-209ENST00000551008 CCR5P51681 352 aa13.33□□□□□ -0.28
NPAS3-209ENST00000551008 AFF3P51826 1226 aaKnown RBP13.33□□□□□ -0.28
NPAS3-209ENST00000551008 GNA12Q03113 381 aa13.33□□□□□ -0.28
NPAS3-209ENST00000551008 SCAPQ12770 1279 aa13.33□□□□□ -0.28
NPAS3-209ENST00000551008 FOXC1Q12948 553 aa13.33□□□□□ -0.28
NPAS3-209ENST00000551008 SLC14A1Q13336 389 aa13.33□□□□□ -0.28
NPAS3-209ENST00000551008 SHBQ15464 509 aa13.33□□□□□ -0.28
NPAS3-209ENST00000551008 ACCSLQ4AC99 568 aa13.33□□□□□ -0.28
NPAS3-209ENST00000551008 PIP5KL1Q5T9C9 394 aa13.33□□□□□ -0.28
NPAS3-209ENST00000551008 ACAD10Q6JQN1 1059 aa13.33□□□□□ -0.28
NPAS3-209ENST00000551008 C22orf39Q6P5X5 142 aa13.33□□□□□ -0.28
NPAS3-209ENST00000551008 LRRC31Q6UY01 552 aa13.33□□□□□ -0.28
NPAS3-209ENST00000551008 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.33□□□□□ -0.28
NPAS3-209ENST00000551008 NAXDQ8IW45 347 aa13.33□□□□□ -0.28
NPAS3-209ENST00000551008 DRC7Q8IY82 874 aa13.33□□□□□ -0.28
NPAS3-209ENST00000551008 MCOLN2Q8IZK6 566 aa13.33□□□□□ -0.28
NPAS3-209ENST00000551008 PYROXD2Q8N2H3 581 aa13.33□□□□□ -0.28
NPAS3-209ENST00000551008 GANCQ8TET4 914 aa13.33□□□□□ -0.28
NPAS3-209ENST00000551008 NTAN1Q96AB6 310 aa13.33□□□□□ -0.28
NPAS3-209ENST00000551008 ARRDC3Q96B67 414 aa13.33□□□□□ -0.28
NPAS3-209ENST00000551008 C2orf49Q9BVC5 232 aaPredicted RBP13.33□□□□□ -0.28
NPAS3-209ENST00000551008 TNKS2Q9H2K2 1166 aa13.33□□□□□ -0.28
NPAS3-209ENST00000551008 TMEM51Q9NW97 253 aa13.33□□□□□ -0.28
NPAS3-209ENST00000551008 OR12D3Q9UGF7 316 aa13.33□□□□□ -0.28
NPAS3-209ENST00000551008 PCOLCE2Q9UKZ9 415 aa13.33□□□□□ -0.28
NPAS3-209ENST00000551008 MYO6Q9UM54 1294 aa13.33□□□□□ -0.28
NPAS3-209ENST00000551008 WASF2Q9Y6W5 498 aa13.33□□□□□ -0.28
NPAS3-209ENST00000551008 ZZEF1O43149 2961 aa13.33□□□□□ -0.28
NPAS3-209ENST00000551008 A0A1W2PQC6 194 aa13.32□□□□□ -0.28
NPAS3-209ENST00000551008 H0Y8X5 98 aa13.32□□□□□ -0.28
NPAS3-209ENST00000551008 ATMINO43313 823 aaPredicted RBP13.32□□□□□ -0.28
NPAS3-209ENST00000551008 CALB1P05937 261 aa13.32□□□□□ -0.28
NPAS3-209ENST00000551008 PBX1P40424 430 aa13.32□□□□□ -0.28
NPAS3-209ENST00000551008 SERPINH1P50454 418 aaKnown RBP13.32□□□□□ -0.28
NPAS3-209ENST00000551008 SIM1P81133 766 aaPredicted RBP13.32□□□□□ -0.28
NPAS3-209ENST00000551008 ZNF423Q2M1K9 1284 aa13.32□□□□□ -0.28
NPAS3-209ENST00000551008 C6orf118Q5T5N4 469 aa13.32□□□□□ -0.28
NPAS3-209ENST00000551008 ACBD5Q5T8D3 534 aaPredicted RBP13.32□□□□□ -0.28
NPAS3-209ENST00000551008 ZNF783Q6ZMS7 281 aa13.32□□□□□ -0.28
NPAS3-209ENST00000551008 CYP4V2Q6ZWL3 525 aaPredicted RBP13.32□□□□□ -0.28
NPAS3-209ENST00000551008 ZNF571Q7Z3V5 609 aaPredicted RBP13.32□□□□□ -0.28
NPAS3-209ENST00000551008 ARFGAP1Q8N6T3 406 aa13.32□□□□□ -0.28
NPAS3-209ENST00000551008 ATP11CQ8NB49 1132 aa13.32□□□□□ -0.28
NPAS3-209ENST00000551008 OR14C36Q8NHC7 312 aa13.32□□□□□ -0.28
NPAS3-209ENST00000551008 MCEEQ96PE7 176 aa13.32□□□□□ -0.28
NPAS3-209ENST00000551008 SELENOOQ9BVL4 669 aa13.32□□□□□ -0.28
NPAS3-209ENST00000551008 TRIM7Q9C029 511 aa13.32□□□□□ -0.28
NPAS3-209ENST00000551008 KLC2Q9H0B6 622 aa13.32□□□□□ -0.28
NPAS3-209ENST00000551008 CBX8Q9HC52 389 aa13.32□□□□□ -0.28
NPAS3-209ENST00000551008 TM7SF3Q9NS93 570 aa13.32□□□□□ -0.28
NPAS3-209ENST00000551008 TMEM248Q9NWD8 314 aa13.32□□□□□ -0.28
NPAS3-209ENST00000551008 GOLGA4Q13439 2230 aaKnown RBP13.31□□□□□ -0.28
NPAS3-209ENST00000551008 SYCE3A1L190 88 aa13.31□□□□□ -0.28
NPAS3-209ENST00000551008 LRRC72A6NJI9 287 aa13.31□□□□□ -0.28
NPAS3-209ENST00000551008 CBX4O00257 560 aa13.31□□□□□ -0.28
NPAS3-209ENST00000551008 DDX3XO00571 662 aaKnown RBP eCLIP13.31□□□□□ -0.28
NPAS3-209ENST00000551008 VILLO15195 856 aa13.31□□□□□ -0.28
NPAS3-209ENST00000551008 HYAL3O43820 417 aaPredicted RBP13.31□□□□□ -0.28
NPAS3-209ENST00000551008 BNIP3LO60238 219 aa13.31□□□□□ -0.28
NPAS3-209ENST00000551008 CER1O95813 267 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms