RNA–Protein interactions for RNA: ENST00000549963.1

GPN3-206, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 497 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-206ENST00000549963 ATP13A4Q4VNC1 1196 aa15.27■□□□□ 0.04
GPN3-206ENST00000549963 C9orf64Q5T6V5 341 aa15.27■□□□□ 0.04
GPN3-206ENST00000549963 FAM46CQ5VWP2 391 aa15.27■□□□□ 0.04
GPN3-206ENST00000549963 C11orf63Q6NUN7 778 aa15.27■□□□□ 0.04
GPN3-206ENST00000549963 LINGO4Q6UY18 593 aa15.27■□□□□ 0.04
GPN3-206ENST00000549963 SYCE1Q8N0S2 351 aa15.27■□□□□ 0.04
GPN3-206ENST00000549963 TPCN2Q8NHX9 752 aa15.27■□□□□ 0.04
GPN3-206ENST00000549963 FAM71BQ8TC56 605 aa15.27■□□□□ 0.04
GPN3-206ENST00000549963 GANCQ8TET4 914 aa15.27■□□□□ 0.04
GPN3-206ENST00000549963 PTPRN2Q92932 1015 aa15.27■□□□□ 0.04
GPN3-206ENST00000549963 ISG20Q96AZ6 181 aaKnown RBP15.27■□□□□ 0.04
GPN3-206ENST00000549963 ZNF670Q9BS34 389 aa15.27■□□□□ 0.04
GPN3-206ENST00000549963 MKRN2Q9H000 416 aaKnown RBP15.27■□□□□ 0.04
GPN3-206ENST00000549963 CD248Q9HCU0 757 aa15.27■□□□□ 0.04
GPN3-206ENST00000549963 ITM2CQ9NQX7 267 aa15.27■□□□□ 0.04
GPN3-206ENST00000549963 EML5Q05BV3 1969 aa15.26■□□□□ 0.03
GPN3-206ENST00000549963 LRRD1A4D1F6 860 aa15.26■□□□□ 0.03
GPN3-206ENST00000549963 DFFAO00273 331 aa15.26■□□□□ 0.03
GPN3-206ENST00000549963 ALOX15BO15296 676 aa15.26■□□□□ 0.03
GPN3-206ENST00000549963 PSTPIP1O43586 416 aa15.26■□□□□ 0.03
GPN3-206ENST00000549963 KRT86O43790 486 aa15.26■□□□□ 0.03
GPN3-206ENST00000549963 BNIP3LO60238 219 aa15.26■□□□□ 0.03
GPN3-206ENST00000549963 ZMPSTE24O75844 475 aa15.26■□□□□ 0.03
GPN3-206ENST00000549963 ADH1BP00325 375 aa15.26■□□□□ 0.03
GPN3-206ENST00000549963 MT-CO1P00395 513 aa15.26■□□□□ 0.03
GPN3-206ENST00000549963 GLDCP23378 1020 aa15.26■□□□□ 0.03
GPN3-206ENST00000549963 P2RY2P41231 377 aa15.26■□□□□ 0.03
GPN3-206ENST00000549963 PAPOLAP51003 745 aaKnown RBP15.26■□□□□ 0.03
GPN3-206ENST00000549963 COPAP53621 1224 aa15.26■□□□□ 0.03
GPN3-206ENST00000549963 CCDC15Q0P6D6 951 aa15.26■□□□□ 0.03
GPN3-206ENST00000549963 DPYSL3Q14195 570 aa15.26■□□□□ 0.03
GPN3-206ENST00000549963 INO80DQ53TQ3 878 aaPredicted RBP15.26■□□□□ 0.03
GPN3-206ENST00000549963 ANKRD20A8PQ5CZ79 823 aa15.26■□□□□ 0.03
GPN3-206ENST00000549963 VSIG1Q86XK7 387 aa15.26■□□□□ 0.03
GPN3-206ENST00000549963 LRRC49Q8IUZ0 686 aa15.26■□□□□ 0.03
GPN3-206ENST00000549963 STK40Q8N2I9 435 aa15.26■□□□□ 0.03
GPN3-206ENST00000549963 PCDH20Q8N6Y1 951 aaKnown RBP15.26■□□□□ 0.03
GPN3-206ENST00000549963 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.26■□□□□ 0.03
GPN3-206ENST00000549963 FRS2Q8WU20 508 aa15.26■□□□□ 0.03
GPN3-206ENST00000549963 NSMCE1Q8WV22 266 aa15.26■□□□□ 0.03
GPN3-206ENST00000549963 TSC1Q92574 1164 aa15.26■□□□□ 0.03
GPN3-206ENST00000549963 HMCESQ96FZ2 354 aa15.26■□□□□ 0.03
GPN3-206ENST00000549963 CELF6Q96J87 481 aaKnown RBP15.26■□□□□ 0.03
GPN3-206ENST00000549963 DESI2Q9BSY9 194 aa15.26■□□□□ 0.03
GPN3-206ENST00000549963 SLC39A8Q9C0K1 460 aa15.26■□□□□ 0.03
GPN3-206ENST00000549963 RSPH9Q9H1X1 276 aaPredicted RBP15.26■□□□□ 0.03
GPN3-206ENST00000549963 EPC1Q9H2F5 836 aa15.26■□□□□ 0.03
GPN3-206ENST00000549963 LRRC19Q9H756 370 aa15.26■□□□□ 0.03
GPN3-206ENST00000549963 TFR2Q9UP52 801 aa15.26■□□□□ 0.03
GPN3-206ENST00000549963 INVSQ9Y283 1065 aa15.26■□□□□ 0.03
GPN3-206ENST00000549963 REXO2Q9Y3B8 237 aaKnown RBP15.26■□□□□ 0.03
GPN3-206ENST00000549963 MUC22E2RYF6 1773 aaPredicted RBP15.26■□□□□ 0.03
GPN3-206ENST00000549963 RCCD1A6NED2 376 aa15.25■□□□□ 0.03
GPN3-206ENST00000549963 ZNF487B1APH4 448 aa15.25■□□□□ 0.03
GPN3-206ENST00000549963 C1QTNF3-AMACRE9PGA6 284 aa15.25■□□□□ 0.03
GPN3-206ENST00000549963 MCF2LO15068 1137 aa15.25■□□□□ 0.03
GPN3-206ENST00000549963 IL1BP01584 269 aa15.25■□□□□ 0.03
GPN3-206ENST00000549963 CCDC175P0C221 793 aa15.25■□□□□ 0.03
GPN3-206ENST00000549963 ZFXP17010 805 aaPredicted RBP15.25■□□□□ 0.03
GPN3-206ENST00000549963 CETN2P41208 172 aa15.25■□□□□ 0.03
GPN3-206ENST00000549963 ARSEP51690 589 aa15.25■□□□□ 0.03
GPN3-206ENST00000549963 RPS14P62263 151 aaKnown RBP15.25■□□□□ 0.03
GPN3-206ENST00000549963 SNRPD1P62314 119 aaKnown RBP15.25■□□□□ 0.03
GPN3-206ENST00000549963 ARF5P84085 180 aa15.25■□□□□ 0.03
GPN3-206ENST00000549963 RAD51Q06609 339 aa15.25■□□□□ 0.03
GPN3-206ENST00000549963 C22orf39Q6P5X5 142 aa15.25■□□□□ 0.03
GPN3-206ENST00000549963 LPCAT2Q7L5N7 544 aa15.25■□□□□ 0.03
GPN3-206ENST00000549963 CPNE8Q86YQ8 564 aa15.25■□□□□ 0.03
GPN3-206ENST00000549963 PLPP6Q8IY26 295 aa15.25■□□□□ 0.03
GPN3-206ENST00000549963 RNF10Q8N5U6 811 aaKnown RBP15.25■□□□□ 0.03
GPN3-206ENST00000549963 UBE2Q2Q8WVN8 375 aa15.25■□□□□ 0.03
GPN3-206ENST00000549963 OMDQ99983 421 aa15.25■□□□□ 0.03
GPN3-206ENST00000549963 LACRTQ9GZZ8 138 aa15.25■□□□□ 0.03
GPN3-206ENST00000549963 SLC6A17Q9H1V8 727 aa15.25■□□□□ 0.03
GPN3-206ENST00000549963 MTG2Q9H4K7 406 aa15.25■□□□□ 0.03
GPN3-206ENST00000549963 NOL6Q9H6R4 1146 aaKnown RBP15.25■□□□□ 0.03
GPN3-206ENST00000549963 SP110Q9HB58 689 aa15.25■□□□□ 0.03
GPN3-206ENST00000549963 UBA2Q9UBT2 640 aaPredicted RBP15.25■□□□□ 0.03
GPN3-206ENST00000549963 CYP8B1Q9UNU6 501 aa15.25■□□□□ 0.03
GPN3-206ENST00000549963 ADGRG1Q9Y653 693 aa15.25■□□□□ 0.03
GPN3-206ENST00000549963 DUSP10Q9Y6W6 482 aa15.25■□□□□ 0.03
GPN3-206ENST00000549963 SPAG17Q6Q759 2223 aa15.25■□□□□ 0.03
GPN3-206ENST00000549963 THADAQ6YHU6 1953 aa15.25■□□□□ 0.03
GPN3-206ENST00000549963 MACROD2A1Z1Q3 448 aa15.24■□□□□ 0.03
GPN3-206ENST00000549963 K7ERQ8 282 aa15.24■□□□□ 0.03
GPN3-206ENST00000549963 DCLK1O15075 740 aa15.24■□□□□ 0.03
GPN3-206ENST00000549963 SMAD6O43541 496 aaKnown RBP15.24■□□□□ 0.03
GPN3-206ENST00000549963 ZRANB2O95218 330 aaKnown RBP eCLIP15.24■□□□□ 0.03
GPN3-206ENST00000549963 PRNPP04156 253 aa15.24■□□□□ 0.03
GPN3-206ENST00000549963 KRT1P04264 644 aa15.24■□□□□ 0.03
GPN3-206ENST00000549963 C5AR1P21730 350 aa15.24■□□□□ 0.03
GPN3-206ENST00000549963 IL4RP24394 825 aa15.24■□□□□ 0.03
GPN3-206ENST00000549963 CD6P30203 668 aa15.24■□□□□ 0.03
GPN3-206ENST00000549963 SLC8A1P32418 973 aa15.24■□□□□ 0.03
GPN3-206ENST00000549963 TPMTP51580 245 aa15.24■□□□□ 0.03
GPN3-206ENST00000549963 MMRN1Q13201 1228 aa15.24■□□□□ 0.03
GPN3-206ENST00000549963 SRSF5Q13243 272 aaKnown RBP15.24■□□□□ 0.03
GPN3-206ENST00000549963 CST6Q15828 149 aa15.24■□□□□ 0.03
GPN3-206ENST00000549963 MAP7D1Q3KQU3 841 aa15.24■□□□□ 0.03
GPN3-206ENST00000549963 CARD16Q5EG05 197 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms