RNA–Protein interactions for RNA: ENST00000549526.1

SMARCD1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-207ENST00000549526 ZNF106Q9H2Y7 1883 aaKnown RBP8.55□□□□□ -1.04
SMARCD1-207ENST00000549526 ZNF233A6NK53 670 aa8.55□□□□□ -1.04
SMARCD1-207ENST00000549526 PLRG1O43660 514 aaKnown RBP8.55□□□□□ -1.04
SMARCD1-207ENST00000549526 DUX1O43812 170 aa8.55□□□□□ -1.04
SMARCD1-207ENST00000549526 KLRC4O43908 158 aa8.55□□□□□ -1.04
SMARCD1-207ENST00000549526 TACC1O75410 805 aa8.55□□□□□ -1.04
SMARCD1-207ENST00000549526 BEST1O76090 585 aa8.55□□□□□ -1.04
SMARCD1-207ENST00000549526 NADKO95544 446 aaPredicted RBP8.55□□□□□ -1.04
SMARCD1-207ENST00000549526 NME1P15531 152 aaKnown RBP8.55□□□□□ -1.04
SMARCD1-207ENST00000549526 JUNDP17535 347 aa8.55□□□□□ -1.04
SMARCD1-207ENST00000549526 AKT2P31751 481 aa8.55□□□□□ -1.04
SMARCD1-207ENST00000549526 CD70P32970 193 aa8.55□□□□□ -1.04
SMARCD1-207ENST00000549526 HOXD13P35453 343 aa8.55□□□□□ -1.04
SMARCD1-207ENST00000549526 LEPRP48357 1165 aaKnown RBP8.55□□□□□ -1.04
SMARCD1-207ENST00000549526 CYP2J2P51589 502 aa8.55□□□□□ -1.04
SMARCD1-207ENST00000549526 MAP3K7CLP57077 242 aa8.55□□□□□ -1.04
SMARCD1-207ENST00000549526 EFEMP1Q12805 493 aa8.55□□□□□ -1.04
SMARCD1-207ENST00000549526 OR6B2Q6IFH4 312 aa8.55□□□□□ -1.04
SMARCD1-207ENST00000549526 C16orf46Q6P387 395 aa8.55□□□□□ -1.04
SMARCD1-207ENST00000549526 PAQR9Q6ZVX9 377 aa8.55□□□□□ -1.04
SMARCD1-207ENST00000549526 CBWD2Q8IUF1 395 aa8.55□□□□□ -1.04
SMARCD1-207ENST00000549526 CACNA2D3Q8IZS8 1091 aa8.55□□□□□ -1.04
SMARCD1-207ENST00000549526 SDR16C5Q8N3Y7 309 aa8.55□□□□□ -1.04
SMARCD1-207ENST00000549526 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.55□□□□□ -1.04
SMARCD1-207ENST00000549526 CCDC47Q96A33 483 aaKnown RBP8.55□□□□□ -1.04
SMARCD1-207ENST00000549526 MYO19Q96H55 970 aa8.55□□□□□ -1.04
SMARCD1-207ENST00000549526 ANKRD36BP1Q96IX9 119 aa8.55□□□□□ -1.04
SMARCD1-207ENST00000549526 SLC45A3Q96JT2 553 aa8.55□□□□□ -1.04
SMARCD1-207ENST00000549526 HAPLN3Q96S86 360 aa8.55□□□□□ -1.04
SMARCD1-207ENST00000549526 CGRRF1Q99675 332 aa8.55□□□□□ -1.04
SMARCD1-207ENST00000549526 CPEB1Q9BZB8 566 aaKnown RBP8.55□□□□□ -1.04
SMARCD1-207ENST00000549526 INTS2Q9H0H0 1204 aaKnown RBP8.55□□□□□ -1.04
SMARCD1-207ENST00000549526 GOLPH3LQ9H4A5 285 aa8.55□□□□□ -1.04
SMARCD1-207ENST00000549526 PDE11AQ9HCR9 933 aa8.55□□□□□ -1.04
SMARCD1-207ENST00000549526 AGPAT3Q9NRZ7 376 aa8.55□□□□□ -1.04
SMARCD1-207ENST00000549526 KRT82Q9NSB4 513 aa8.55□□□□□ -1.04
SMARCD1-207ENST00000549526 SCML2Q9UQR0 700 aa8.55□□□□□ -1.04
SMARCD1-207ENST00000549526 TNRC6AQ8NDV7 1962 aaKnown RBP8.55□□□□□ -1.04
SMARCD1-207ENST00000549526 FAM237AA0A1B0GTK4 181 aa8.54□□□□□ -1.04
SMARCD1-207ENST00000549526 EDDM13A0A1B0GTR0 161 aa8.54□□□□□ -1.04
SMARCD1-207ENST00000549526 A0A1W2PQM1 296 aa8.54□□□□□ -1.04
SMARCD1-207ENST00000549526 SLC7A4O43246 635 aa8.54□□□□□ -1.04
SMARCD1-207ENST00000549526 TGFB1I1O43294 461 aa8.54□□□□□ -1.04
SMARCD1-207ENST00000549526 ZNF202O95125 648 aa8.54□□□□□ -1.04
SMARCD1-207ENST00000549526 TNNC2P02585 160 aa8.54□□□□□ -1.04
SMARCD1-207ENST00000549526 RPN1P04843 607 aaKnown RBP8.54□□□□□ -1.04
SMARCD1-207ENST00000549526 MYL1P05976 194 aa8.54□□□□□ -1.04
SMARCD1-207ENST00000549526 ANXA6P08133 673 aa8.54□□□□□ -1.04
SMARCD1-207ENST00000549526 PRR29P0C7W0 189 aa8.54□□□□□ -1.04
SMARCD1-207ENST00000549526 RALAP11233 206 aa8.54□□□□□ -1.04
SMARCD1-207ENST00000549526 HNRNPA2B1P22626 353 aaKnown RBP8.54□□□□□ -1.04
SMARCD1-207ENST00000549526 ITGB7P26010 798 aa8.54□□□□□ -1.04
SMARCD1-207ENST00000549526 MZF1P28698 734 aaPredicted RBP8.54□□□□□ -1.04
SMARCD1-207ENST00000549526 OAS2P29728 719 aaKnown RBP8.54□□□□□ -1.04
SMARCD1-207ENST00000549526 UGT1A3P35503 534 aa8.54□□□□□ -1.04
SMARCD1-207ENST00000549526 METAP1P53582 386 aa8.54□□□□□ -1.04
SMARCD1-207ENST00000549526 COPB1P53618 953 aaKnown RBP8.54□□□□□ -1.04
SMARCD1-207ENST00000549526 ADKP55263 362 aaKnown RBP8.54□□□□□ -1.04
SMARCD1-207ENST00000549526 STK4Q13043 487 aa8.54□□□□□ -1.04
SMARCD1-207ENST00000549526 C1orf61Q13536 156 aa8.54□□□□□ -1.04
SMARCD1-207ENST00000549526 FZD2Q14332 565 aa8.54□□□□□ -1.04
SMARCD1-207ENST00000549526 ARID5BQ14865 1188 aa8.54□□□□□ -1.04
SMARCD1-207ENST00000549526 KNOP1Q1ED39 458 aaKnown RBP8.54□□□□□ -1.04
SMARCD1-207ENST00000549526 PHF19Q5T6S3 580 aa8.54□□□□□ -1.04
SMARCD1-207ENST00000549526 KRBA2Q6ZNG9 492 aa8.54□□□□□ -1.04
SMARCD1-207ENST00000549526 PTAR1Q7Z6K3 402 aaPredicted RBP8.54□□□□□ -1.04
SMARCD1-207ENST00000549526 KIAA0895Q8NCT3 520 aa8.54□□□□□ -1.04
SMARCD1-207ENST00000549526 ZMIZ2Q8NF64 920 aa8.54□□□□□ -1.04
SMARCD1-207ENST00000549526 JAKMIP2Q96AA8 810 aa8.54□□□□□ -1.04
SMARCD1-207ENST00000549526 CCDC74AQ96AQ1 378 aa8.54□□□□□ -1.04
SMARCD1-207ENST00000549526 CCDC34Q96HJ3 373 aa8.54□□□□□ -1.04
SMARCD1-207ENST00000549526 SMOQ99835 787 aa8.54□□□□□ -1.04
SMARCD1-207ENST00000549526 SLC29A3Q9BZD2 475 aa8.54□□□□□ -1.04
SMARCD1-207ENST00000549526 B3GNT4Q9C0J1 378 aa8.54□□□□□ -1.04
SMARCD1-207ENST00000549526 LRRN3Q9H3W5 708 aa8.54□□□□□ -1.04
SMARCD1-207ENST00000549526 GPN2Q9H9Y4 310 aaPredicted RBP8.54□□□□□ -1.04
SMARCD1-207ENST00000549526 KIAA1586Q9HCI6 787 aa8.54□□□□□ -1.04
SMARCD1-207ENST00000549526 AKAP7Q9P0M2 348 aaPredicted RBP8.54□□□□□ -1.04
SMARCD1-207ENST00000549526 KLF15Q9UIH9 416 aa8.54□□□□□ -1.04
SMARCD1-207ENST00000549526 RABGEF1Q9UJ41 708 aa8.54□□□□□ -1.04
SMARCD1-207ENST00000549526 A0A1W2PQU0 124 aa8.53□□□□□ -1.04
SMARCD1-207ENST00000549526 A6NNZ2 444 aa8.53□□□□□ -1.04
SMARCD1-207ENST00000549526 EXOC3O60645 756 aa8.53□□□□□ -1.04
SMARCD1-207ENST00000549526 GCATO75600 419 aa8.53□□□□□ -1.04
SMARCD1-207ENST00000549526 ASLP04424 464 aa8.53□□□□□ -1.04
SMARCD1-207ENST00000549526 FAM163BP0C2L3 166 aa8.53□□□□□ -1.04
SMARCD1-207ENST00000549526 DLATP10515 647 aaKnown RBP8.53□□□□□ -1.04
SMARCD1-207ENST00000549526 CSKP41240 450 aa8.53□□□□□ -1.04
SMARCD1-207ENST00000549526 PSEN1P49768 467 aa8.53□□□□□ -1.04
SMARCD1-207ENST00000549526 SNRPFP62306 86 aaKnown RBP8.53□□□□□ -1.04
SMARCD1-207ENST00000549526 TNNC1P63316 161 aa8.53□□□□□ -1.04
SMARCD1-207ENST00000549526 ZFP36L1Q07352 338 aaKnown RBP8.53□□□□□ -1.04
SMARCD1-207ENST00000549526 SURF1Q15526 300 aa8.53□□□□□ -1.04
SMARCD1-207ENST00000549526 TESK1Q15569 626 aa8.53□□□□□ -1.04
SMARCD1-207ENST00000549526 INPP5JQ15735 1006 aaPredicted RBP8.53□□□□□ -1.04
SMARCD1-207ENST00000549526 SNRNP35Q16560 246 aaKnown RBP8.53□□□□□ -1.04
SMARCD1-207ENST00000549526 WDR72Q3MJ13 1102 aa8.53□□□□□ -1.04
SMARCD1-207ENST00000549526 CEP135Q66GS9 1140 aa8.53□□□□□ -1.04
SMARCD1-207ENST00000549526 PARGQ86W56 976 aa8.53□□□□□ -1.04
SMARCD1-207ENST00000549526 FAM217AQ8IXS0 508 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms